RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 OCM2P0CE71 109 aa9.5□□□□□ -0.89
TPM1-212ENST00000558347 OCMP0CE72 109 aaPredicted RBP9.5□□□□□ -0.89
TPM1-212ENST00000558347 NR2F6P10588 404 aa9.5□□□□□ -0.89
TPM1-212ENST00000558347 PPP2R1BP30154 601 aa9.5□□□□□ -0.89
TPM1-212ENST00000558347 BUD31P41223 144 aaPredicted RBP9.5□□□□□ -0.89
TPM1-212ENST00000558347 LIM2P55344 173 aa9.5□□□□□ -0.89
TPM1-212ENST00000558347 VLDLRP98155 873 aa9.5□□□□□ -0.89
TPM1-212ENST00000558347 TNFRSF17Q02223 184 aa9.5□□□□□ -0.89
TPM1-212ENST00000558347 AQP6Q13520 282 aa9.5□□□□□ -0.89
TPM1-212ENST00000558347 MLC1Q15049 377 aa9.5□□□□□ -0.89
TPM1-212ENST00000558347 DGUOKQ16854 277 aa9.5□□□□□ -0.89
TPM1-212ENST00000558347 PRSS53Q2L4Q9 553 aa9.5□□□□□ -0.89
TPM1-212ENST00000558347 MPEG1Q2M385 716 aa9.5□□□□□ -0.89
TPM1-212ENST00000558347 ANKDD1AQ495B1 522 aa9.5□□□□□ -0.89
TPM1-212ENST00000558347 IQCCQ4KMZ1 466 aa9.5□□□□□ -0.89
TPM1-212ENST00000558347 ZNF766Q5HY98 468 aa9.5□□□□□ -0.89
TPM1-212ENST00000558347 ZNF468Q5VIY5 522 aaPredicted RBP9.5□□□□□ -0.89
TPM1-212ENST00000558347 SLC30A8Q8IWU4 369 aa9.5□□□□□ -0.89
TPM1-212ENST00000558347 MMP21Q8N119 569 aa9.5□□□□□ -0.89
TPM1-212ENST00000558347 CENPSQ8N2Z9 138 aa9.5□□□□□ -0.89
TPM1-212ENST00000558347 SLC5A8Q8N695 610 aa9.5□□□□□ -0.89
TPM1-212ENST00000558347 APCDD1LQ8NCL9 501 aa9.5□□□□□ -0.89
TPM1-212ENST00000558347 C11orf65Q8NCR3 313 aa9.5□□□□□ -0.89
TPM1-212ENST00000558347 MDS2Q8NDY4 140 aa9.5□□□□□ -0.89
TPM1-212ENST00000558347 SUN3Q8TAQ9 357 aa9.5□□□□□ -0.89
TPM1-212ENST00000558347 CNIH3Q8TBE1 160 aa9.5□□□□□ -0.89
TPM1-212ENST00000558347 RNF217Q8TC41 542 aa9.5□□□□□ -0.89
TPM1-212ENST00000558347 ZFP90Q8TF47 636 aa9.5□□□□□ -0.89
TPM1-212ENST00000558347 PHF10Q8WUB8 498 aaKnown RBP9.5□□□□□ -0.89
TPM1-212ENST00000558347 NR4A3Q92570 626 aa9.5□□□□□ -0.89
TPM1-212ENST00000558347 SH3YL1Q96HL8 342 aaPredicted RBP9.5□□□□□ -0.89
TPM1-212ENST00000558347 C7orf34Q96L11 122 aa9.5□□□□□ -0.89
TPM1-212ENST00000558347 SIGLEC11Q96RL6 698 aa9.5□□□□□ -0.89
TPM1-212ENST00000558347 MAPKAP1Q9BPZ7 522 aa9.5□□□□□ -0.89
TPM1-212ENST00000558347 CCDC90BQ9GZT6 254 aa9.5□□□□□ -0.89
TPM1-212ENST00000558347 CDCP1Q9H5V8 836 aa9.5□□□□□ -0.89
TPM1-212ENST00000558347 AKIP1Q9NQ31 210 aa9.5□□□□□ -0.89
TPM1-212ENST00000558347 PRTFDC1Q9NRG1 225 aa9.5□□□□□ -0.89
TPM1-212ENST00000558347 CHCHD3Q9NX63 227 aaKnown RBP9.5□□□□□ -0.89
TPM1-212ENST00000558347 THUMPD1Q9NXG2 353 aaKnown RBP9.5□□□□□ -0.89
TPM1-212ENST00000558347 ERVK-18Q9QC07 812 aa9.5□□□□□ -0.89
TPM1-212ENST00000558347 PLEKHB1Q9UF11 243 aaPredicted RBP9.5□□□□□ -0.89
TPM1-212ENST00000558347 FBXW2Q9UKT8 454 aa9.5□□□□□ -0.89
TPM1-212ENST00000558347 CES1P1Q9UKY3 287 aa9.5□□□□□ -0.89
TPM1-212ENST00000558347 OSGIN2Q9Y236 505 aa9.5□□□□□ -0.89
TPM1-212ENST00000558347 SLC5A6Q9Y289 635 aa9.5□□□□□ -0.89
TPM1-212ENST00000558347 U3KQV3 271 aa9.5□□□□□ -0.89
TPM1-212ENST00000558347 ZGRF1Q86YA3 2104 aa9.5□□□□□ -0.89
TPM1-212ENST00000558347 SVILO95425 2214 aa9.5□□□□□ -0.89
TPM1-212ENST00000558347 SPTBN1Q01082 2364 aaKnown RBP9.49□□□□□ -0.89
TPM1-212ENST00000558347 DOPEY1Q5JWR5 2465 aa9.49□□□□□ -0.89
TPM1-212ENST00000558347 CLDN24A6NM45 220 aa9.49□□□□□ -0.89
TPM1-212ENST00000558347 ADAMDEC1O15204 470 aa9.49□□□□□ -0.89
TPM1-212ENST00000558347 MAGEB3O15480 346 aa9.49□□□□□ -0.89
TPM1-212ENST00000558347 FAM20BO75063 409 aa9.49□□□□□ -0.89
TPM1-212ENST00000558347 NEURL1O76050 574 aa9.49□□□□□ -0.89
TPM1-212ENST00000558347 DDAH2O95865 285 aa9.49□□□□□ -0.89
TPM1-212ENST00000558347 CPN2P22792 545 aa9.49□□□□□ -0.89
TPM1-212ENST00000558347 MST1P26927 711 aa9.49□□□□□ -0.89
TPM1-212ENST00000558347 TLX1P31314 330 aaPredicted RBP9.49□□□□□ -0.89
TPM1-212ENST00000558347 HSD17B7P56937 341 aa9.49□□□□□ -0.89
TPM1-212ENST00000558347 KCNJ10P78508 379 aa9.49□□□□□ -0.89
TPM1-212ENST00000558347 PPP1R8Q12972 351 aaKnown RBP9.49□□□□□ -0.89
TPM1-212ENST00000558347 NPRL3Q12980 569 aa9.49□□□□□ -0.89
TPM1-212ENST00000558347 RGNQ15493 299 aa9.49□□□□□ -0.89
TPM1-212ENST00000558347 OR1C1Q15619 314 aa9.49□□□□□ -0.89
TPM1-212ENST00000558347 CEBPEQ15744 281 aa9.49□□□□□ -0.89
TPM1-212ENST00000558347 UBE2UQ5VVX9 321 aa9.49□□□□□ -0.89
TPM1-212ENST00000558347 C18orf63Q68DL7 685 aa9.49□□□□□ -0.89
TPM1-212ENST00000558347 SPINK14Q6IE38 97 aa9.49□□□□□ -0.89
TPM1-212ENST00000558347 SLC48A1Q6P1K1 146 aa9.49□□□□□ -0.89
TPM1-212ENST00000558347 CCDC80Q76M96 950 aa9.49□□□□□ -0.89
TPM1-212ENST00000558347 GALNT5Q7Z7M9 940 aa9.49□□□□□ -0.89
TPM1-212ENST00000558347 IGFN1Q86VF2 1251 aa9.49□□□□□ -0.89
TPM1-212ENST00000558347 P2RY8Q86VZ1 359 aa9.49□□□□□ -0.89
TPM1-212ENST00000558347 RPS19BP1Q86WX3 136 aaKnown RBP9.49□□□□□ -0.89
TPM1-212ENST00000558347 ATG16L2Q8NAA4 619 aa9.49□□□□□ -0.89
TPM1-212ENST00000558347 ADAMTS18Q8TE60 1221 aa9.49□□□□□ -0.89
TPM1-212ENST00000558347 ITPKCQ96DU7 683 aa9.49□□□□□ -0.89
TPM1-212ENST00000558347 SCMH1Q96GD3 660 aa9.49□□□□□ -0.89
TPM1-212ENST00000558347 HRASLS5Q96KN8 279 aa9.49□□□□□ -0.89
TPM1-212ENST00000558347 C5orf34Q96MH7 638 aa9.49□□□□□ -0.89
TPM1-212ENST00000558347 ZNF300Q96RE9 604 aaPredicted RBP9.49□□□□□ -0.89
TPM1-212ENST00000558347 PSD2Q9BQI7 771 aa9.49□□□□□ -0.89
TPM1-212ENST00000558347 UTP23Q9BRU9 249 aaKnown RBP9.49□□□□□ -0.89
TPM1-212ENST00000558347 DOHHQ9BU89 302 aa9.49□□□□□ -0.89
TPM1-212ENST00000558347 SLC35C2Q9NQQ7 365 aa9.49□□□□□ -0.89
TPM1-212ENST00000558347 KLHL1Q9NR64 748 aa9.49□□□□□ -0.89
TPM1-212ENST00000558347 PNO1Q9NRX1 252 aaKnown RBP9.49□□□□□ -0.89
TPM1-212ENST00000558347 ACSS1Q9NUB1 689 aaPredicted RBP9.49□□□□□ -0.89
TPM1-212ENST00000558347 ABI3Q9P2A4 366 aa9.49□□□□□ -0.89
TPM1-212ENST00000558347 ZNF223Q9UK11 482 aaPredicted RBP9.49□□□□□ -0.89
TPM1-212ENST00000558347 SPACA6W5XKT8 324 aa9.49□□□□□ -0.89
TPM1-212ENST00000558347 CRYBG3Q68DQ2 2970 aa9.48□□□□□ -0.89
TPM1-212ENST00000558347 A0A1W2PRB8 838 aa9.48□□□□□ -0.89
TPM1-212ENST00000558347 hCG_2039718K7EN88 272 aa9.48□□□□□ -0.89
TPM1-212ENST00000558347 M0R3G1 203 aa9.48□□□□□ -0.89
TPM1-212ENST00000558347 PGRMC2O15173 223 aa9.48□□□□□ -0.89
TPM1-212ENST00000558347 PDPK1O15530 556 aa9.48□□□□□ -0.89
TPM1-212ENST00000558347 XPNPEP2O43895 674 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms