RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 ULK2Q8IYT8 1036 aa7.56□□□□□ -1.2
PSEN1-223ENST00000557511 FADS6Q8N9I5 356 aa7.56□□□□□ -1.2
PSEN1-223ENST00000557511 CHDHQ8NE62 594 aaPredicted RBP7.56□□□□□ -1.2
PSEN1-223ENST00000557511 RFWD2Q8NHY2 731 aa7.56□□□□□ -1.2
PSEN1-223ENST00000557511 VPS33AQ96AX1 596 aa7.56□□□□□ -1.2
PSEN1-223ENST00000557511 ZBTB8AQ96BR9 441 aa7.56□□□□□ -1.2
PSEN1-223ENST00000557511 ROPN1LQ96C74 230 aa7.56□□□□□ -1.2
PSEN1-223ENST00000557511 SPDL1Q96EA4 605 aa7.56□□□□□ -1.2
PSEN1-223ENST00000557511 C1GALT1C1Q96EU7 318 aa7.56□□□□□ -1.2
PSEN1-223ENST00000557511 SH3YL1Q96HL8 342 aaPredicted RBP7.56□□□□□ -1.2
PSEN1-223ENST00000557511 TRIB1Q96RU8 372 aa7.56□□□□□ -1.2
PSEN1-223ENST00000557511 SDF2Q99470 211 aa7.56□□□□□ -1.2
PSEN1-223ENST00000557511 INPP5KQ9BT40 448 aa7.56□□□□□ -1.2
PSEN1-223ENST00000557511 TMEM120AQ9BXJ8 343 aa7.56□□□□□ -1.2
PSEN1-223ENST00000557511 NMUR2Q9GZQ4 415 aa7.56□□□□□ -1.2
PSEN1-223ENST00000557511 NSRP1Q9H0G5 558 aaKnown RBP7.56□□□□□ -1.2
PSEN1-223ENST00000557511 ARMC7Q9H6L4 198 aa7.56□□□□□ -1.2
PSEN1-223ENST00000557511 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.56□□□□□ -1.2
PSEN1-223ENST00000557511 FLRT3Q9NZU0 649 aa7.56□□□□□ -1.2
PSEN1-223ENST00000557511 SPRR3Q9UBC9 169 aa7.56□□□□□ -1.2
PSEN1-223ENST00000557511 P2RX2Q9UBL9 471 aa7.56□□□□□ -1.2
PSEN1-223ENST00000557511 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.56□□□□□ -1.2
PSEN1-223ENST00000557511 CORO2BQ9UQ03 480 aa7.56□□□□□ -1.2
PSEN1-223ENST00000557511 VDAC3Q9Y277 283 aa7.56□□□□□ -1.2
PSEN1-223ENST00000557511 UBR5O95071 2799 aaPredicted RBP7.56□□□□□ -1.2
PSEN1-223ENST00000557511 A0A096LPI6 279 aa7.55□□□□□ -1.2
PSEN1-223ENST00000557511 IGLV3-32A0A0A0MS00 114 aa7.55□□□□□ -1.2
PSEN1-223ENST00000557511 NPIPA5A0A0B4J1W7 369 aa7.55□□□□□ -1.2
PSEN1-223ENST00000557511 GJE1A6NN92 205 aa7.55□□□□□ -1.2
PSEN1-223ENST00000557511 NPIPA7E9PJI5 369 aa7.55□□□□□ -1.2
PSEN1-223ENST00000557511 H3BML4 177 aa7.55□□□□□ -1.2
PSEN1-223ENST00000557511 DVL2O14641 736 aa7.55□□□□□ -1.2
PSEN1-223ENST00000557511 ZNF264O43296 627 aa7.55□□□□□ -1.2
PSEN1-223ENST00000557511 EIF4E2O60573 245 aaKnown RBP7.55□□□□□ -1.2
PSEN1-223ENST00000557511 CSTAP01040 98 aa7.55□□□□□ -1.2
PSEN1-223ENST00000557511 NPIPA8P0DM63 369 aa7.55□□□□□ -1.2
PSEN1-223ENST00000557511 UBL4AP11441 157 aa7.55□□□□□ -1.2
PSEN1-223ENST00000557511 UQCRBP14927 111 aa7.55□□□□□ -1.2
PSEN1-223ENST00000557511 CPN1P15169 458 aa7.55□□□□□ -1.2
PSEN1-223ENST00000557511 ZNF17P17021 662 aa7.55□□□□□ -1.2
PSEN1-223ENST00000557511 MDH1P40925 334 aaKnown RBP7.55□□□□□ -1.2
PSEN1-223ENST00000557511 ZFP36L2P47974 494 aaKnown RBP7.55□□□□□ -1.2
PSEN1-223ENST00000557511 CRISP3P54108 245 aa7.55□□□□□ -1.2
PSEN1-223ENST00000557511 GAS1P54826 345 aa7.55□□□□□ -1.2
PSEN1-223ENST00000557511 DSTNP60981 165 aa7.55□□□□□ -1.2
PSEN1-223ENST00000557511 EEF1A1P68104 462 aaKnown RBP7.55□□□□□ -1.2
PSEN1-223ENST00000557511 GUCY1A3Q02108 690 aa7.55□□□□□ -1.2
PSEN1-223ENST00000557511 CBFBQ13951 182 aa7.55□□□□□ -1.2
PSEN1-223ENST00000557511 BCL2A1Q16548 175 aa7.55□□□□□ -1.2
PSEN1-223ENST00000557511 SGCBQ16585 318 aa7.55□□□□□ -1.2
PSEN1-223ENST00000557511 MMEL1Q495T6 779 aa7.55□□□□□ -1.2
PSEN1-223ENST00000557511 EXOSC6Q5RKV6 272 aaKnown RBP7.55□□□□□ -1.2
PSEN1-223ENST00000557511 PDZK1Q5T2W1 519 aa7.55□□□□□ -1.2
PSEN1-223ENST00000557511 RIPPLY2Q5TAB7 128 aa7.55□□□□□ -1.2
PSEN1-223ENST00000557511 EEF1A1P5Q5VTE0 462 aa7.55□□□□□ -1.2
PSEN1-223ENST00000557511 PPP4R4Q6NUP7 873 aa7.55□□□□□ -1.2
PSEN1-223ENST00000557511 LRRC74BQ6ZQY2 392 aa7.55□□□□□ -1.2
PSEN1-223ENST00000557511 CHERPQ8IWX8 916 aaKnown RBP7.55□□□□□ -1.2
PSEN1-223ENST00000557511 PEX5LQ8IYB4 626 aa7.55□□□□□ -1.2
PSEN1-223ENST00000557511 UBQLNLQ8IYU4 475 aa7.55□□□□□ -1.2
PSEN1-223ENST00000557511 ZNF619Q8N2I2 560 aa7.55□□□□□ -1.2
PSEN1-223ENST00000557511 OR9I1Q8NGQ6 314 aa7.55□□□□□ -1.2
PSEN1-223ENST00000557511 ZNF563Q8TA94 476 aa7.55□□□□□ -1.2
PSEN1-223ENST00000557511 PNPT1Q8TCS8 783 aaKnown RBP7.55□□□□□ -1.2
PSEN1-223ENST00000557511 ZPLD1Q8TCW7 415 aa7.55□□□□□ -1.2
PSEN1-223ENST00000557511 ZFP90Q8TF47 636 aa7.55□□□□□ -1.2
PSEN1-223ENST00000557511 RNF138Q8WVD3 245 aa7.55□□□□□ -1.2
PSEN1-223ENST00000557511 ITLN2Q8WWU7 325 aaPredicted RBP7.55□□□□□ -1.2
PSEN1-223ENST00000557511 SMPDL3BQ92485 455 aa7.55□□□□□ -1.2
PSEN1-223ENST00000557511 PMM1Q92871 262 aa7.55□□□□□ -1.2
PSEN1-223ENST00000557511 RAB8BQ92930 207 aa7.55□□□□□ -1.2
PSEN1-223ENST00000557511 PSMG3-AS1Q96PY0 264 aa7.55□□□□□ -1.2
PSEN1-223ENST00000557511 TRNT1Q96Q11 434 aaKnown RBP7.55□□□□□ -1.2
PSEN1-223ENST00000557511 DMRTA2Q96SC8 542 aa7.55□□□□□ -1.2
PSEN1-223ENST00000557511 TM9SF2Q99805 663 aa7.55□□□□□ -1.2
PSEN1-223ENST00000557511 TTYH2Q9BSA4 534 aa7.55□□□□□ -1.2
PSEN1-223ENST00000557511 PRRG4Q9BZD6 226 aa7.55□□□□□ -1.2
PSEN1-223ENST00000557511 PRDM14Q9GZV8 571 aa7.55□□□□□ -1.2
PSEN1-223ENST00000557511 TPT1P8Q9HAU6 139 aa7.55□□□□□ -1.2
PSEN1-223ENST00000557511 KCNJ16Q9NPI9 418 aa7.55□□□□□ -1.2
PSEN1-223ENST00000557511 FGFR1OP2Q9NVK5 253 aa7.55□□□□□ -1.2
PSEN1-223ENST00000557511 FBXO34Q9NWN3 711 aa7.55□□□□□ -1.2
PSEN1-223ENST00000557511 PAQR5Q9NXK6 330 aaPredicted RBP7.55□□□□□ -1.2
PSEN1-223ENST00000557511 LEF1Q9UJU2 399 aaPredicted RBP7.55□□□□□ -1.2
PSEN1-223ENST00000557511 MKLN1Q9UL63 735 aa7.55□□□□□ -1.2
PSEN1-223ENST00000557511 SLC35A3Q9Y2D2 325 aa7.55□□□□□ -1.2
PSEN1-223ENST00000557511 NDUFAF1Q9Y375 327 aa7.55□□□□□ -1.2
PSEN1-223ENST00000557511 KLF2Q9Y5W3 355 aaPredicted RBP7.55□□□□□ -1.2
PSEN1-223ENST00000557511 AP4B1Q9Y6B7 739 aa7.55□□□□□ -1.2
PSEN1-223ENST00000557511 KCNE3Q9Y6H6 103 aa7.55□□□□□ -1.2
PSEN1-223ENST00000557511 BAHCC1Q9P281 2608 aa7.55□□□□□ -1.2
PSEN1-223ENST00000557511 A0A1W2PP18 115 aa7.54□□□□□ -1.2
PSEN1-223ENST00000557511 OR2M5A3KFT3 312 aa7.54□□□□□ -1.2
PSEN1-223ENST00000557511 SERINC4A6NH21 518 aa7.54□□□□□ -1.2
PSEN1-223ENST00000557511 M0R082 166 aa7.54□□□□□ -1.2
PSEN1-223ENST00000557511 CLIC1O00299 241 aa7.54□□□□□ -1.2
PSEN1-223ENST00000557511 HMGN4O00479 90 aa7.54□□□□□ -1.2
PSEN1-223ENST00000557511 DYNC1I1O14576 645 aa7.54□□□□□ -1.2
PSEN1-223ENST00000557511 SEC14L5O43304 696 aa7.54□□□□□ -1.2
PSEN1-223ENST00000557511 KIAA0513O60268 411 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms