RNA–Protein interactions for RNA: ENST00000557477.1

PRPF39-212, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 724 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-212ENST00000557477 RPL37AP8A6NKH3 93 aa3.72□□□□□ -1.81
PRPF39-212ENST00000557477 E9PQ18 207 aa3.72□□□□□ -1.81
PRPF39-212ENST00000557477 K7ERI5 159 aa3.72□□□□□ -1.81
PRPF39-212ENST00000557477 CYTH3O43739 400 aa3.72□□□□□ -1.81
PRPF39-212ENST00000557477 ZNF254O75437 659 aa3.72□□□□□ -1.81
PRPF39-212ENST00000557477 SEMA4FO95754 770 aa3.72□□□□□ -1.81
PRPF39-212ENST00000557477 SLC25A27O95847 323 aa3.72□□□□□ -1.81
PRPF39-212ENST00000557477 CA3P07451 260 aa3.72□□□□□ -1.81
PRPF39-212ENST00000557477 RALAP11233 206 aa3.72□□□□□ -1.81
PRPF39-212ENST00000557477 DNAJB1P25685 340 aa3.72□□□□□ -1.81
PRPF39-212ENST00000557477 LMO2P25791 158 aa3.72□□□□□ -1.81
PRPF39-212ENST00000557477 CCT6AP40227 531 aaKnown RBP3.72□□□□□ -1.81
PRPF39-212ENST00000557477 MATKP42679 507 aa3.72□□□□□ -1.81
PRPF39-212ENST00000557477 ASMTP46597 345 aa3.72□□□□□ -1.81
PRPF39-212ENST00000557477 GPC3P51654 580 aa3.72□□□□□ -1.81
PRPF39-212ENST00000557477 SGSHP51688 502 aa3.72□□□□□ -1.81
PRPF39-212ENST00000557477 RIDAP52758 137 aaKnown RBP3.72□□□□□ -1.81
PRPF39-212ENST00000557477 HSD17B7P56937 341 aa3.72□□□□□ -1.81
PRPF39-212ENST00000557477 NAAAQ02083 359 aa3.72□□□□□ -1.81
PRPF39-212ENST00000557477 ACY1Q03154 408 aa3.72□□□□□ -1.81
PRPF39-212ENST00000557477 ZSWIM7Q19AV6 140 aa3.72□□□□□ -1.81
PRPF39-212ENST00000557477 SNAI3Q3KNW1 292 aa3.72□□□□□ -1.81
PRPF39-212ENST00000557477 CENPQQ7L2Z9 268 aaPredicted RBP3.72□□□□□ -1.81
PRPF39-212ENST00000557477 PYROXD2Q8N2H3 581 aa3.72□□□□□ -1.81
PRPF39-212ENST00000557477 TRIML2Q8N7C3 387 aa3.72□□□□□ -1.81
PRPF39-212ENST00000557477 OR4Q3Q8NH05 313 aa3.72□□□□□ -1.81
PRPF39-212ENST00000557477 TAF15Q92804 592 aaKnown RBP eCLIP3.72□□□□□ -1.81
PRPF39-212ENST00000557477 CCDC51Q96ER9 411 aa3.72□□□□□ -1.81
PRPF39-212ENST00000557477 C12orf42Q96LP6 360 aa3.72□□□□□ -1.81
PRPF39-212ENST00000557477 HSD17B14Q9BPX1 270 aa3.72□□□□□ -1.81
PRPF39-212ENST00000557477 RBM4BQ9BQ04 359 aaKnown RBP3.72□□□□□ -1.81
PRPF39-212ENST00000557477 NDUFAF3Q9BU61 184 aa3.72□□□□□ -1.81
PRPF39-212ENST00000557477 ST6GALNAC5Q9BVH7 336 aa3.72□□□□□ -1.81
PRPF39-212ENST00000557477 UBXN6Q9BZV1 441 aa3.72□□□□□ -1.81
PRPF39-212ENST00000557477 NSRP1Q9H0G5 558 aaKnown RBP3.72□□□□□ -1.81
PRPF39-212ENST00000557477 VCPKMTQ9H867 229 aa3.72□□□□□ -1.81
PRPF39-212ENST00000557477 SP140LQ9H930 580 aa3.72□□□□□ -1.81
PRPF39-212ENST00000557477 ACTR8Q9H981 624 aa3.72□□□□□ -1.81
PRPF39-212ENST00000557477 PARVGQ9HBI0 331 aa3.72□□□□□ -1.81
PRPF39-212ENST00000557477 FKBP14Q9NWM8 211 aa3.72□□□□□ -1.81
PRPF39-212ENST00000557477 GTSE1Q9NYZ3 720 aa3.72□□□□□ -1.81
PRPF39-212ENST00000557477 MOB4Q9Y3A3 225 aa3.72□□□□□ -1.81
PRPF39-212ENST00000557477 TIMM22Q9Y584 194 aa3.72□□□□□ -1.81
PRPF39-212ENST00000557477 CACNA1FO60840 1977 aa3.72□□□□□ -1.81
PRPF39-212ENST00000557477 NAV1Q8NEY1 1877 aa3.71□□□□□ -1.82
PRPF39-212ENST00000557477 IGHV3-16A0A0C4DH30 117 aa3.71□□□□□ -1.82
PRPF39-212ENST00000557477 A0A1W2PPR1 153 aa3.71□□□□□ -1.82
PRPF39-212ENST00000557477 BCLAF3A2AJT9 711 aaKnown RBP3.71□□□□□ -1.82
PRPF39-212ENST00000557477 RNF212BA8MTL3 300 aa3.71□□□□□ -1.82
PRPF39-212ENST00000557477 H3BMH7 237 aa3.71□□□□□ -1.82
PRPF39-212ENST00000557477 POLR3GO15318 223 aaPredicted RBP3.71□□□□□ -1.82
PRPF39-212ENST00000557477 BUB1O43683 1085 aa3.71□□□□□ -1.82
PRPF39-212ENST00000557477 AKR7A3O95154 331 aa3.71□□□□□ -1.82
PRPF39-212ENST00000557477 GAS8-AS1O95177 125 aa3.71□□□□□ -1.82
PRPF39-212ENST00000557477 ASGR1P07306 291 aa3.71□□□□□ -1.82
PRPF39-212ENST00000557477 PNMA6AP0CW24 399 aaPredicted RBP3.71□□□□□ -1.82
PRPF39-212ENST00000557477 CCDC166P0CW27 439 aa3.71□□□□□ -1.82
PRPF39-212ENST00000557477 H2AFXP16104 143 aaPredicted RBP3.71□□□□□ -1.82
PRPF39-212ENST00000557477 ARF4P18085 180 aaPredicted RBP3.71□□□□□ -1.82
PRPF39-212ENST00000557477 UCP1P25874 307 aa3.71□□□□□ -1.82
PRPF39-212ENST00000557477 NUMBP49757 651 aa3.71□□□□□ -1.82
PRPF39-212ENST00000557477 RAG2P55895 527 aa3.71□□□□□ -1.82
PRPF39-212ENST00000557477 KRTAP10-7P60409 375 aaPredicted RBP3.71□□□□□ -1.82
PRPF39-212ENST00000557477 HTD2P86397 168 aa3.71□□□□□ -1.82
PRPF39-212ENST00000557477 BEX3Q00994 111 aa3.71□□□□□ -1.82
PRPF39-212ENST00000557477 DR1Q01658 176 aa3.71□□□□□ -1.82
PRPF39-212ENST00000557477 FCHO2Q0JRZ9 810 aa3.71□□□□□ -1.82
PRPF39-212ENST00000557477 BNIP1Q12981 228 aa3.71□□□□□ -1.82
PRPF39-212ENST00000557477 CFAP157Q5JU67 520 aa3.71□□□□□ -1.82
PRPF39-212ENST00000557477 C9orf66Q5T8R8 295 aa3.71□□□□□ -1.82
PRPF39-212ENST00000557477 AGAP7PQ5VUJ5 663 aa3.71□□□□□ -1.82
PRPF39-212ENST00000557477 GALNT17Q6IS24 598 aa3.71□□□□□ -1.82
PRPF39-212ENST00000557477 REG3GQ6UW15 175 aa3.71□□□□□ -1.82
PRPF39-212ENST00000557477 CXCL17Q6UXB2 119 aa3.71□□□□□ -1.82
PRPF39-212ENST00000557477 ADAMTSL5Q6ZMM2 481 aa3.71□□□□□ -1.82
PRPF39-212ENST00000557477 TMEM179Q6ZVK1 233 aa3.71□□□□□ -1.82
PRPF39-212ENST00000557477 CATSPER4Q7RTX7 472 aa3.71□□□□□ -1.82
PRPF39-212ENST00000557477 TIPARPQ7Z3E1 657 aaKnown RBP3.71□□□□□ -1.82
PRPF39-212ENST00000557477 SYVN1Q86TM6 617 aa3.71□□□□□ -1.82
PRPF39-212ENST00000557477 LUZP1Q86V48 1076 aa3.71□□□□□ -1.82
PRPF39-212ENST00000557477 PHC2Q8IXK0 858 aa3.71□□□□□ -1.82
PRPF39-212ENST00000557477 TEX9Q8N6V9 391 aa3.71□□□□□ -1.82
PRPF39-212ENST00000557477 CEP112Q8N8E3 955 aa3.71□□□□□ -1.82
PRPF39-212ENST00000557477 MAPK1IP1LQ8NDC0 245 aa3.71□□□□□ -1.82
PRPF39-212ENST00000557477 FCGR1BQ92637 280 aa3.71□□□□□ -1.82
PRPF39-212ENST00000557477 CDKL2Q92772 493 aa3.71□□□□□ -1.82
PRPF39-212ENST00000557477 MCHR2Q969V1 340 aa3.71□□□□□ -1.82
PRPF39-212ENST00000557477 BIRC7Q96CA5 298 aa3.71□□□□□ -1.82
PRPF39-212ENST00000557477 CPXM1Q96SM3 734 aa3.71□□□□□ -1.82
PRPF39-212ENST00000557477 CCT7Q99832 543 aa3.71□□□□□ -1.82
PRPF39-212ENST00000557477 UPF3BQ9BZI7 483 aaKnown RBP3.71□□□□□ -1.82
PRPF39-212ENST00000557477 NMNAT2Q9BZQ4 307 aa3.71□□□□□ -1.82
PRPF39-212ENST00000557477 CCSER1Q9C0I3 900 aa3.71□□□□□ -1.82
PRPF39-212ENST00000557477 ADNPQ9H2P0 1102 aa3.71□□□□□ -1.82
PRPF39-212ENST00000557477 HEXA-AS1Q9H8Q6 139 aa3.71□□□□□ -1.82
PRPF39-212ENST00000557477 ADGRL4Q9HBW9 690 aa3.71□□□□□ -1.82
PRPF39-212ENST00000557477 YAE1D1Q9NRH1 226 aa3.71□□□□□ -1.82
PRPF39-212ENST00000557477 HPF1Q9NWY4 346 aa3.71□□□□□ -1.82
PRPF39-212ENST00000557477 TAS2R3Q9NYW6 316 aa3.71□□□□□ -1.82
PRPF39-212ENST00000557477 CIDEBQ9UHD4 219 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms