RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 SCGB1D1O95968 90 aa5.24□□□□□ -1.57
VPS33B-207ENST00000557470 SOD3P08294 240 aa5.24□□□□□ -1.57
VPS33B-207ENST00000557470 ITGA5P08648 1049 aa5.24□□□□□ -1.57
VPS33B-207ENST00000557470 PPP3CBP16298 524 aa5.24□□□□□ -1.57
VPS33B-207ENST00000557470 DPP4P27487 766 aa5.24□□□□□ -1.57
VPS33B-207ENST00000557470 ACVR1BP36896 505 aa5.24□□□□□ -1.57
VPS33B-207ENST00000557470 SUCLG1P53597 346 aaKnown RBP5.24□□□□□ -1.57
VPS33B-207ENST00000557470 RPS4XP62701 263 aaKnown RBP5.24□□□□□ -1.57
VPS33B-207ENST00000557470 PHEXP78562 749 aa5.24□□□□□ -1.57
VPS33B-207ENST00000557470 DUSP2Q05923 314 aa5.24□□□□□ -1.57
VPS33B-207ENST00000557470 DLG1Q12959 904 aa5.24□□□□□ -1.57
VPS33B-207ENST00000557470 LSAMPQ13449 338 aa5.24□□□□□ -1.57
VPS33B-207ENST00000557470 CUL3Q13618 768 aa5.24□□□□□ -1.57
VPS33B-207ENST00000557470 MORF4L2Q15014 288 aa5.24□□□□□ -1.57
VPS33B-207ENST00000557470 PON3Q15166 354 aa5.24□□□□□ -1.57
VPS33B-207ENST00000557470 BCL2A1Q16548 175 aa5.24□□□□□ -1.57
VPS33B-207ENST00000557470 CPSF6Q16630 551 aaKnown RBP eCLIP5.24□□□□□ -1.57
VPS33B-207ENST00000557470 PRICKLE4Q2TBC4 344 aa5.24□□□□□ -1.57
VPS33B-207ENST00000557470 KRTAP24-1Q3LI83 254 aa5.24□□□□□ -1.57
VPS33B-207ENST00000557470 ZNF362Q5T0B9 420 aaPredicted RBP5.24□□□□□ -1.57
VPS33B-207ENST00000557470 FAM111BQ6SJ93 734 aa5.24□□□□□ -1.57
VPS33B-207ENST00000557470 KLHL17Q6TDP4 642 aa5.24□□□□□ -1.57
VPS33B-207ENST00000557470 STAC2Q6ZMT1 411 aa5.24□□□□□ -1.57
VPS33B-207ENST00000557470 CHMP1BQ7LBR1 199 aa5.24□□□□□ -1.57
VPS33B-207ENST00000557470 KRTAP19-1Q8IUB9 90 aa5.24□□□□□ -1.57
VPS33B-207ENST00000557470 FBXO36Q8NEA4 188 aa5.24□□□□□ -1.57
VPS33B-207ENST00000557470 OR4K14Q8NGD5 310 aa5.24□□□□□ -1.57
VPS33B-207ENST00000557470 OR52R1Q8NGF1 315 aa5.24□□□□□ -1.57
VPS33B-207ENST00000557470 ACTRT1Q8TDG2 376 aa5.24□□□□□ -1.57
VPS33B-207ENST00000557470 TSPEARQ8WU66 669 aa5.24□□□□□ -1.57
VPS33B-207ENST00000557470 AKAP1Q92667 903 aaKnown RBP eCLIP5.24□□□□□ -1.57
VPS33B-207ENST00000557470 ZBED6CLQ96FA7 236 aaPredicted RBP5.24□□□□□ -1.57
VPS33B-207ENST00000557470 TSPAN17Q96FV3 270 aa5.24□□□□□ -1.57
VPS33B-207ENST00000557470 SLC35A4Q96G79 324 aa5.24□□□□□ -1.57
VPS33B-207ENST00000557470 LCORQ96JN0 433 aaPredicted RBP5.24□□□□□ -1.57
VPS33B-207ENST00000557470 C16orf92Q96LL3 132 aa5.24□□□□□ -1.57
VPS33B-207ENST00000557470 COL21A1Q96P44 957 aa5.24□□□□□ -1.57
VPS33B-207ENST00000557470 ATOH8Q96SQ7 321 aa5.24□□□□□ -1.57
VPS33B-207ENST00000557470 GPR22Q99680 433 aa5.24□□□□□ -1.57
VPS33B-207ENST00000557470 DDX47Q9H0S4 455 aaKnown RBP5.24□□□□□ -1.57
VPS33B-207ENST00000557470 ACSS3Q9H6R3 686 aa5.24□□□□□ -1.57
VPS33B-207ENST00000557470 MAT2BQ9NZL9 334 aa5.24□□□□□ -1.57
VPS33B-207ENST00000557470 BCAP29Q9UHQ4 241 aa5.24□□□□□ -1.57
VPS33B-207ENST00000557470 ZNF639Q9UID6 485 aa5.24□□□□□ -1.57
VPS33B-207ENST00000557470 PCDHGB4Q9UN71 923 aa5.24□□□□□ -1.57
VPS33B-207ENST00000557470 PROCRQ9UNN8 238 aa5.24□□□□□ -1.57
VPS33B-207ENST00000557470 CFL2Q9Y281 166 aa5.24□□□□□ -1.57
VPS33B-207ENST00000557470 PLLPQ9Y342 182 aa5.24□□□□□ -1.57
VPS33B-207ENST00000557470 RRP15Q9Y3B9 282 aaKnown RBP5.24□□□□□ -1.57
VPS33B-207ENST00000557470 MRPS18CQ9Y3D5 142 aaKnown RBP5.24□□□□□ -1.57
VPS33B-207ENST00000557470 TSC22D4Q9Y3Q8 395 aa5.24□□□□□ -1.57
VPS33B-207ENST00000557470 PCDHGB5Q9Y5G0 923 aa5.24□□□□□ -1.57
VPS33B-207ENST00000557470 V9GYY5 206 aaPredicted RBP5.24□□□□□ -1.57
VPS33B-207ENST00000557470 MEGF8Q7Z7M0 2845 aa5.23□□□□□ -1.57
VPS33B-207ENST00000557470 A8MV72 311 aaPredicted RBP5.23□□□□□ -1.57
VPS33B-207ENST00000557470 CXorf49A8MYA2 514 aaPredicted RBP5.23□□□□□ -1.57
VPS33B-207ENST00000557470 FOXE1O00358 373 aaPredicted RBP5.23□□□□□ -1.57
VPS33B-207ENST00000557470 TO15178 435 aa5.23□□□□□ -1.57
VPS33B-207ENST00000557470 TP73O15350 636 aa5.23□□□□□ -1.57
VPS33B-207ENST00000557470 SEC14L5O43304 696 aa5.23□□□□□ -1.57
VPS33B-207ENST00000557470 KERAO60938 352 aa5.23□□□□□ -1.57
VPS33B-207ENST00000557470 NDUFS7O75251 213 aa5.23□□□□□ -1.57
VPS33B-207ENST00000557470 NME6O75414 186 aaPredicted RBP5.23□□□□□ -1.57
VPS33B-207ENST00000557470 REM1O75628 298 aa5.23□□□□□ -1.57
VPS33B-207ENST00000557470 SEMA3DO95025 777 aa5.23□□□□□ -1.57
VPS33B-207ENST00000557470 TNFRSF6BO95407 300 aa5.23□□□□□ -1.57
VPS33B-207ENST00000557470 IGHV4-39P01824 125 aa5.23□□□□□ -1.57
VPS33B-207ENST00000557470 ATP1B1P05026 303 aa5.23□□□□□ -1.57
VPS33B-207ENST00000557470 KLK1P06870 262 aa5.23□□□□□ -1.57
VPS33B-207ENST00000557470 DANCRP0C864 163 aa5.23□□□□□ -1.57
VPS33B-207ENST00000557470 FAM157CP0CG43 387 aa5.23□□□□□ -1.57
VPS33B-207ENST00000557470 PEPDP12955 493 aa5.23□□□□□ -1.57
VPS33B-207ENST00000557470 DRD5P21918 477 aa5.23□□□□□ -1.57
VPS33B-207ENST00000557470 IDUAP35475 653 aa5.23□□□□□ -1.57
VPS33B-207ENST00000557470 CDKN1AP38936 164 aa5.23□□□□□ -1.57
VPS33B-207ENST00000557470 FEN1P39748 380 aaKnown RBP5.23□□□□□ -1.57
VPS33B-207ENST00000557470 PPICP45877 212 aa5.23□□□□□ -1.57
VPS33B-207ENST00000557470 SLC6A8P48029 635 aa5.23□□□□□ -1.57
VPS33B-207ENST00000557470 PIK3CGP48736 1102 aa5.23□□□□□ -1.57
VPS33B-207ENST00000557470 EMDP50402 254 aa5.23□□□□□ -1.57
VPS33B-207ENST00000557470 GAS1P54826 345 aa5.23□□□□□ -1.57
VPS33B-207ENST00000557470 LGALS4P56470 323 aa5.23□□□□□ -1.57
VPS33B-207ENST00000557470 DSCR4P56555 118 aaPredicted RBP5.23□□□□□ -1.57
VPS33B-207ENST00000557470 CLDN20P56880 219 aa5.23□□□□□ -1.57
VPS33B-207ENST00000557470 CORO7P57737 925 aa5.23□□□□□ -1.57
VPS33B-207ENST00000557470 GPX6P59796 221 aa5.23□□□□□ -1.57
VPS33B-207ENST00000557470 ZNF844Q08AG5 666 aa5.23□□□□□ -1.57
VPS33B-207ENST00000557470 MALLQ13021 153 aa5.23□□□□□ -1.57
VPS33B-207ENST00000557470 PDIA2Q13087 525 aaKnown RBP5.23□□□□□ -1.57
VPS33B-207ENST00000557470 FGFBP1Q14512 234 aa5.23□□□□□ -1.57
VPS33B-207ENST00000557470 SLMAPQ14BN4 828 aa5.23□□□□□ -1.57
VPS33B-207ENST00000557470 LTB4RQ15722 352 aa5.23□□□□□ -1.57
VPS33B-207ENST00000557470 ETFDHQ16134 617 aa5.23□□□□□ -1.57
VPS33B-207ENST00000557470 MMEL1Q495T6 779 aa5.23□□□□□ -1.57
VPS33B-207ENST00000557470 TRMT12Q53H54 448 aaKnown RBP5.23□□□□□ -1.57
VPS33B-207ENST00000557470 RAET1LQ5VY80 246 aa5.23□□□□□ -1.57
VPS33B-207ENST00000557470 LIPJQ5W064 366 aa5.23□□□□□ -1.57
VPS33B-207ENST00000557470 SLC48A1Q6P1K1 146 aa5.23□□□□□ -1.57
VPS33B-207ENST00000557470 SEZ6L2Q6UXD5 910 aa5.23□□□□□ -1.57
VPS33B-207ENST00000557470 DNM1P46Q6ZS02 220 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms