RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 PGAM2P15259 253 aa2.74□□□□□ -1.97
VRK1-207ENST00000557352 TIA1P31483 386 aaKnown RBP eCLIP2.74□□□□□ -1.97
VRK1-207ENST00000557352 CDH5P33151 784 aaPredicted RBP2.74□□□□□ -1.97
VRK1-207ENST00000557352 GCLMP48507 274 aa2.74□□□□□ -1.97
VRK1-207ENST00000557352 KLK7P49862 253 aa2.74□□□□□ -1.97
VRK1-207ENST00000557352 ACLYP53396 1101 aa2.74□□□□□ -1.97
VRK1-207ENST00000557352 UCNP55089 124 aa2.74□□□□□ -1.97
VRK1-207ENST00000557352 NLRP11P59045 1033 aaKnown RBP2.74□□□□□ -1.97
VRK1-207ENST00000557352 YWHAEP62258 255 aaKnown RBP2.74□□□□□ -1.97
VRK1-207ENST00000557352 NOP14P78316 857 aaKnown RBP2.74□□□□□ -1.97
VRK1-207ENST00000557352 MRPS6P82932 125 aaKnown RBP2.74□□□□□ -1.97
VRK1-207ENST00000557352 CKAP4Q07065 602 aaKnown RBP2.74□□□□□ -1.97
VRK1-207ENST00000557352 KLHL30Q0D2K2 578 aa2.74□□□□□ -1.97
VRK1-207ENST00000557352 INCA1Q0VD86 236 aa2.74□□□□□ -1.97
VRK1-207ENST00000557352 SPA17Q15506 151 aa2.74□□□□□ -1.97
VRK1-207ENST00000557352 ZBTB6Q15916 424 aa2.74□□□□□ -1.97
VRK1-207ENST00000557352 PKN2Q16513 984 aaKnown RBP2.74□□□□□ -1.97
VRK1-207ENST00000557352 C14orf28Q4W4Y0 310 aa2.74□□□□□ -1.97
VRK1-207ENST00000557352 NHSL2Q5HYW2 709 aa2.74□□□□□ -1.97
VRK1-207ENST00000557352 ABRAXAS1Q6UWZ7 409 aa2.74□□□□□ -1.97
VRK1-207ENST00000557352 HOOK3Q86VS8 718 aa2.74□□□□□ -1.97
VRK1-207ENST00000557352 TUSC5Q8IXB3 177 aa2.74□□□□□ -1.97
VRK1-207ENST00000557352 TMCO5AQ8N6Q1 288 aa2.74□□□□□ -1.97
VRK1-207ENST00000557352 METTL13Q8N6R0 699 aa2.74□□□□□ -1.97
VRK1-207ENST00000557352 LRRC52Q8N7C0 313 aa2.74□□□□□ -1.97
VRK1-207ENST00000557352 NKAIN3Q8N8D7 197 aa2.74□□□□□ -1.97
VRK1-207ENST00000557352 SMYD1Q8NB12 490 aa2.74□□□□□ -1.97
VRK1-207ENST00000557352 ATAD1Q8NBU5 361 aa2.74□□□□□ -1.97
VRK1-207ENST00000557352 RAET1EQ8TD07 263 aa2.74□□□□□ -1.97
VRK1-207ENST00000557352 CKAP2Q8WWK9 683 aa2.74□□□□□ -1.97
VRK1-207ENST00000557352 SEPT8Q92599 483 aa2.74□□□□□ -1.97
VRK1-207ENST00000557352 CORO2AQ92828 525 aa2.74□□□□□ -1.97
VRK1-207ENST00000557352 SGF29Q96ES7 293 aa2.74□□□□□ -1.97
VRK1-207ENST00000557352 EEF2KMTQ96G04 330 aa2.74□□□□□ -1.97
VRK1-207ENST00000557352 ANKRD36BP1Q96IX9 119 aa2.74□□□□□ -1.97
VRK1-207ENST00000557352 RPGRIP1Q96KN7 1286 aa2.74□□□□□ -1.97
VRK1-207ENST00000557352 CHP1Q99653 195 aa2.74□□□□□ -1.97
VRK1-207ENST00000557352 FAM213AQ9BRX8 229 aa2.74□□□□□ -1.97
VRK1-207ENST00000557352 CRACR2AQ9BSW2 395 aa2.74□□□□□ -1.97
VRK1-207ENST00000557352 MLPHQ9BV36 600 aaPredicted RBP2.74□□□□□ -1.97
VRK1-207ENST00000557352 CCDC94Q9BW85 323 aaPredicted RBP2.74□□□□□ -1.97
VRK1-207ENST00000557352 CYP3A43Q9HB55 503 aa2.74□□□□□ -1.97
VRK1-207ENST00000557352 TMEM161AQ9NX61 479 aa2.74□□□□□ -1.97
VRK1-207ENST00000557352 RNF14Q9UBS8 474 aa2.74□□□□□ -1.97
VRK1-207ENST00000557352 LEF1Q9UJU2 399 aaPredicted RBP2.74□□□□□ -1.97
VRK1-207ENST00000557352 DNAJC12Q9UKB3 198 aa2.74□□□□□ -1.97
VRK1-207ENST00000557352 KIAA1257Q9ULG3 409 aa2.74□□□□□ -1.97
VRK1-207ENST00000557352 ABCG2Q9UNQ0 655 aa2.74□□□□□ -1.97
VRK1-207ENST00000557352 ITM2BQ9Y287 266 aa2.74□□□□□ -1.97
VRK1-207ENST00000557352 TRANK1O15050 2925 aa2.74□□□□□ -1.97
VRK1-207ENST00000557352 DOCK8Q8NF50 2099 aa2.73□□□□□ -1.97
VRK1-207ENST00000557352 MYOFQ9NZM1 2061 aa2.73□□□□□ -1.97
VRK1-207ENST00000557352 PIKFYVEQ9Y2I7 2098 aa2.73□□□□□ -1.97
VRK1-207ENST00000557352 NYNRINQ9P2P1 1898 aaKnown RBP2.73□□□□□ -1.97
VRK1-207ENST00000557352 KIF26AQ9ULI4 1882 aaPredicted RBP2.73□□□□□ -1.97
VRK1-207ENST00000557352 GRIN2DO15399 1336 aa2.73□□□□□ -1.97
VRK1-207ENST00000557352 PTPRJQ12913 1337 aa2.73□□□□□ -1.97
VRK1-207ENST00000557352 BRWD1Q9NSI6 2320 aa2.73□□□□□ -1.97
VRK1-207ENST00000557352 C2orf16Q68DN1 1984 aa2.73□□□□□ -1.97
VRK1-207ENST00000557352 A0A087X0T9 212 aa2.73□□□□□ -1.97
VRK1-207ENST00000557352 GOLGA8IPA6NC78 632 aa2.73□□□□□ -1.97
VRK1-207ENST00000557352 EPOPA6NHQ4 379 aa2.73□□□□□ -1.97
VRK1-207ENST00000557352 SDR42E2A6NKP2 422 aa2.73□□□□□ -1.97
VRK1-207ENST00000557352 GOLGA8JA6NMD2 632 aa2.73□□□□□ -1.97
VRK1-207ENST00000557352 USP27XA6NNY8 438 aa2.73□□□□□ -1.97
VRK1-207ENST00000557352 H0Y626 953 aa2.73□□□□□ -1.97
VRK1-207ENST00000557352 B4GALT5O43286 388 aa2.73□□□□□ -1.97
VRK1-207ENST00000557352 RTN2O75298 545 aa2.73□□□□□ -1.97
VRK1-207ENST00000557352 ASGR1P07306 291 aa2.73□□□□□ -1.97
VRK1-207ENST00000557352 FAM228BP0C875 321 aa2.73□□□□□ -1.97
VRK1-207ENST00000557352 CXCL8P10145 99 aa2.73□□□□□ -1.97
VRK1-207ENST00000557352 CYP11B1P15538 503 aa2.73□□□□□ -1.97
VRK1-207ENST00000557352 TNNI1P19237 187 aa2.73□□□□□ -1.97
VRK1-207ENST00000557352 CCND3P30281 292 aaPredicted RBP2.73□□□□□ -1.97
VRK1-207ENST00000557352 TNFSF9P41273 254 aa2.73□□□□□ -1.97
VRK1-207ENST00000557352 ACOT2P49753 483 aa2.73□□□□□ -1.97
VRK1-207ENST00000557352 BEX3Q00994 111 aa2.73□□□□□ -1.97
VRK1-207ENST00000557352 FOLH1Q04609 750 aa2.73□□□□□ -1.97
VRK1-207ENST00000557352 CUL2Q13617 745 aa2.73□□□□□ -1.97
VRK1-207ENST00000557352 SLC17A1Q14916 467 aa2.73□□□□□ -1.97
VRK1-207ENST00000557352 CNPY1Q3B7I2 92 aa2.73□□□□□ -1.97
VRK1-207ENST00000557352 CCDC122Q5T0U0 273 aa2.73□□□□□ -1.97
VRK1-207ENST00000557352 ALKBH5Q6P6C2 394 aaKnown RBP2.73□□□□□ -1.97
VRK1-207ENST00000557352 ARCQ7LC44 396 aa2.73□□□□□ -1.97
VRK1-207ENST00000557352 CATSPER4Q7RTX7 472 aa2.73□□□□□ -1.97
VRK1-207ENST00000557352 ZNF571Q7Z3V5 609 aaPredicted RBP2.73□□□□□ -1.97
VRK1-207ENST00000557352 FAM228AQ86W67 206 aa2.73□□□□□ -1.97
VRK1-207ENST00000557352 UNC93AQ86WB7 457 aa2.73□□□□□ -1.97
VRK1-207ENST00000557352 PHF13Q86YI8 300 aaPredicted RBP2.73□□□□□ -1.97
VRK1-207ENST00000557352 EFCAB13Q8IY85 973 aa2.73□□□□□ -1.97
VRK1-207ENST00000557352 SYCE1Q8N0S2 351 aa2.73□□□□□ -1.97
VRK1-207ENST00000557352 OR5B17Q8NGF7 314 aa2.73□□□□□ -1.97
VRK1-207ENST00000557352 DNAJB3Q8WWF6 145 aa2.73□□□□□ -1.97
VRK1-207ENST00000557352 MR1Q95460 341 aa2.73□□□□□ -1.97
VRK1-207ENST00000557352 MAGEB18Q96M61 343 aa2.73□□□□□ -1.97
VRK1-207ENST00000557352 C16orf45Q96MC5 204 aaPredicted RBP2.73□□□□□ -1.97
VRK1-207ENST00000557352 ZNF560Q96MR9 790 aa2.73□□□□□ -1.97
VRK1-207ENST00000557352 GLT1D1Q96MS3 346 aa2.73□□□□□ -1.97
VRK1-207ENST00000557352 ALS2CR12Q96Q35 445 aa2.73□□□□□ -1.97
VRK1-207ENST00000557352 C17orf62Q9BQA9 187 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms