RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, human

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCFD1-223	ENST00000557076	CTAGE9	A4FU28	777 aa		4.14	□□□□□ -1.75
SCFD1-223	ENST00000557076	DNAJC9-AS1	A6NH13	148 aa		4.14	□□□□□ -1.75
SCFD1-223	ENST00000557076		E7EQL1	145 aa		4.14	□□□□□ -1.75
SCFD1-223	ENST00000557076	AKAP10	O43572	662 aa		4.14	□□□□□ -1.75
SCFD1-223	ENST00000557076	GCM2	O75603	506 aa	Predicted RBP	4.14	□□□□□ -1.75
SCFD1-223	ENST00000557076	AQP8	O94778	261 aa		4.14	□□□□□ -1.75
SCFD1-223	ENST00000557076	SCEL	O95171	688 aa		4.14	□□□□□ -1.75
SCFD1-223	ENST00000557076	GPANK1	O95872	356 aa		4.14	□□□□□ -1.75
SCFD1-223	ENST00000557076	SCGB1D2	O95969	90 aa		4.14	□□□□□ -1.75
SCFD1-223	ENST00000557076	GYPC	P04921	128 aa		4.14	□□□□□ -1.75
SCFD1-223	ENST00000557076	SLC35E2B	P0CK96	405 aa		4.14	□□□□□ -1.75
SCFD1-223	ENST00000557076	SLC35E2	P0CK97	266 aa		4.14	□□□□□ -1.75
SCFD1-223	ENST00000557076	PTN	P21246	168 aa		4.14	□□□□□ -1.75
SCFD1-223	ENST00000557076	HIST1H1T	P22492	207 aa	Predicted RBP	4.14	□□□□□ -1.75
SCFD1-223	ENST00000557076	CPN2	P22792	545 aa		4.14	□□□□□ -1.75
SCFD1-223	ENST00000557076	CERS1	P27544	350 aa		4.14	□□□□□ -1.75
SCFD1-223	ENST00000557076	ECHS1	P30084	290 aa		4.14	□□□□□ -1.75
SCFD1-223	ENST00000557076	TLX1	P31314	330 aa	Predicted RBP	4.14	□□□□□ -1.75
SCFD1-223	ENST00000557076	CTNNA1	P35221	906 aa	Known RBP	4.14	□□□□□ -1.75
SCFD1-223	ENST00000557076	PDLIM4	P50479	330 aa		4.14	□□□□□ -1.75
SCFD1-223	ENST00000557076	DVL1P1	P54792	670 aa	Predicted RBP	4.14	□□□□□ -1.75
SCFD1-223	ENST00000557076	CTBP2	P56545	445 aa		4.14	□□□□□ -1.75
SCFD1-223	ENST00000557076	DSCR4	P56555	118 aa	Predicted RBP	4.14	□□□□□ -1.75
SCFD1-223	ENST00000557076	RWDD2B	P57060	319 aa		4.14	□□□□□ -1.75
SCFD1-223	ENST00000557076	TIAL1	Q01085	375 aa	Known RBP eCLIP	4.14	□□□□□ -1.75
SCFD1-223	ENST00000557076	HMGCS1	Q01581	520 aa		4.14	□□□□□ -1.75
SCFD1-223	ENST00000557076	SLAMF1	Q13291	335 aa		4.14	□□□□□ -1.75
SCFD1-223	ENST00000557076	GGTLC2	Q14390	218 aa		4.14	□□□□□ -1.75
SCFD1-223	ENST00000557076	P2RY6	Q15077	328 aa		4.14	□□□□□ -1.75
SCFD1-223	ENST00000557076	PDCD1	Q15116	288 aa		4.14	□□□□□ -1.75
SCFD1-223	ENST00000557076	TAB1	Q15750	504 aa		4.14	□□□□□ -1.75
SCFD1-223	ENST00000557076	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	4.14	□□□□□ -1.75
SCFD1-223	ENST00000557076	ZSWIM7	Q19AV6	140 aa		4.14	□□□□□ -1.75
SCFD1-223	ENST00000557076	IQCC	Q4KMZ1	466 aa		4.14	□□□□□ -1.75
SCFD1-223	ENST00000557076	TMEM35A	Q53FP2	167 aa		4.14	□□□□□ -1.75
SCFD1-223	ENST00000557076	CT83	Q5H943	113 aa		4.14	□□□□□ -1.75
SCFD1-223	ENST00000557076	CES3	Q6UWW8	571 aa		4.14	□□□□□ -1.75
SCFD1-223	ENST00000557076		Q6ZSR9	355 aa		4.14	□□□□□ -1.75
SCFD1-223	ENST00000557076	ZBTB46	Q86UZ6	589 aa		4.14	□□□□□ -1.75
SCFD1-223	ENST00000557076	GABRG1	Q8N1C3	465 aa		4.14	□□□□□ -1.75
SCFD1-223	ENST00000557076	FBXL14	Q8N1E6	418 aa		4.14	□□□□□ -1.75
SCFD1-223	ENST00000557076	MUC15	Q8N387	334 aa		4.14	□□□□□ -1.75
SCFD1-223	ENST00000557076	METTL25	Q8N6Q8	603 aa		4.14	□□□□□ -1.75
SCFD1-223	ENST00000557076	ZNF615	Q8N8J6	731 aa		4.14	□□□□□ -1.75
SCFD1-223	ENST00000557076	GBP7	Q8N8V2	638 aa	Predicted RBP	4.14	□□□□□ -1.75
SCFD1-223	ENST00000557076	OR7G1	Q8NGA0	311 aa		4.14	□□□□□ -1.75
SCFD1-223	ENST00000557076	HTRA1	Q92743	480 aa		4.14	□□□□□ -1.75
SCFD1-223	ENST00000557076	MRPL24	Q96A35	216 aa	Known RBP	4.14	□□□□□ -1.75
SCFD1-223	ENST00000557076	CCDC42	Q96M95	316 aa		4.14	□□□□□ -1.75
SCFD1-223	ENST00000557076	F2RL3	Q96RI0	385 aa		4.14	□□□□□ -1.75
SCFD1-223	ENST00000557076	NODAL	Q96S42	347 aa		4.14	□□□□□ -1.75
SCFD1-223	ENST00000557076	AIFM2	Q9BRQ8	373 aa		4.14	□□□□□ -1.75
SCFD1-223	ENST00000557076	PIMREG	Q9BSJ6	248 aa		4.14	□□□□□ -1.75
SCFD1-223	ENST00000557076	OSBPL11	Q9BXB4	747 aa		4.14	□□□□□ -1.75
SCFD1-223	ENST00000557076	CAPS2	Q9BXY5	557 aa		4.14	□□□□□ -1.75
SCFD1-223	ENST00000557076	TSGA10	Q9BZW7	698 aa		4.14	□□□□□ -1.75
SCFD1-223	ENST00000557076	KLK15	Q9H2R5	256 aa		4.14	□□□□□ -1.75
SCFD1-223	ENST00000557076	GOLPH3	Q9H4A6	298 aa		4.14	□□□□□ -1.75
SCFD1-223	ENST00000557076	EHD1	Q9H4M9	534 aa		4.14	□□□□□ -1.75
SCFD1-223	ENST00000557076	METTL17	Q9H7H0	456 aa	Predicted RBP	4.14	□□□□□ -1.75
SCFD1-223	ENST00000557076	COPS7B	Q9H9Q2	264 aa	Predicted RBP	4.14	□□□□□ -1.75
SCFD1-223	ENST00000557076	CXorf21	Q9HAI6	301 aa		4.14	□□□□□ -1.75
SCFD1-223	ENST00000557076	FBXO34	Q9NWN3	711 aa		4.14	□□□□□ -1.75
SCFD1-223	ENST00000557076	MED29	Q9NX70	200 aa		4.14	□□□□□ -1.75
SCFD1-223	ENST00000557076	RNF7	Q9UBF6	113 aa		4.14	□□□□□ -1.75
SCFD1-223	ENST00000557076	FBXL2	Q9UKC9	423 aa		4.14	□□□□□ -1.75
SCFD1-223	ENST00000557076	ZNF490	Q9ULM2	529 aa	Predicted RBP	4.14	□□□□□ -1.75
SCFD1-223	ENST00000557076	MGAT4B	Q9UQ53	548 aa		4.14	□□□□□ -1.75
SCFD1-223	ENST00000557076	ZNF337	Q9Y3M9	751 aa		4.14	□□□□□ -1.75
SCFD1-223	ENST00000557076	AP4B1	Q9Y6B7	739 aa		4.14	□□□□□ -1.75
SCFD1-223	ENST00000557076	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	4.14	□□□□□ -1.75
SCFD1-223	ENST00000557076	OR6C70	A6NIJ9	312 aa		4.13	□□□□□ -1.75
SCFD1-223	ENST00000557076	AKR1B15	C9JRZ8	316 aa	Predicted RBP	4.13	□□□□□ -1.75
SCFD1-223	ENST00000557076		H0YC42	278 aa		4.13	□□□□□ -1.75
SCFD1-223	ENST00000557076	GOLGA8M	H3BSY2	632 aa		4.13	□□□□□ -1.75
SCFD1-223	ENST00000557076	ADAMDEC1	O15204	470 aa		4.13	□□□□□ -1.75
SCFD1-223	ENST00000557076	ACOX3	O15254	700 aa		4.13	□□□□□ -1.75
SCFD1-223	ENST00000557076	SS18L1	O75177	396 aa	Predicted RBP	4.13	□□□□□ -1.75
SCFD1-223	ENST00000557076	UGT2B11	O75310	529 aa		4.13	□□□□□ -1.75
SCFD1-223	ENST00000557076	ULK1	O75385	1050 aa		4.13	□□□□□ -1.75
SCFD1-223	ENST00000557076	HAUS5	O94927	633 aa		4.13	□□□□□ -1.75
SCFD1-223	ENST00000557076	PLG	P00747	810 aa	Predicted RBP	4.13	□□□□□ -1.75
SCFD1-223	ENST00000557076	S1PR1	P21453	382 aa		4.13	□□□□□ -1.75
SCFD1-223	ENST00000557076	DRD5	P21918	477 aa		4.13	□□□□□ -1.75
SCFD1-223	ENST00000557076	PTAFR	P25105	342 aa		4.13	□□□□□ -1.75
SCFD1-223	ENST00000557076	GIF	P27352	417 aa		4.13	□□□□□ -1.75
SCFD1-223	ENST00000557076	CASP2	P42575	452 aa		4.13	□□□□□ -1.75
SCFD1-223	ENST00000557076	SLC6A8	P48029	635 aa		4.13	□□□□□ -1.75
SCFD1-223	ENST00000557076	FABP6	P51161	128 aa		4.13	□□□□□ -1.75
SCFD1-223	ENST00000557076	GAS1	P54826	345 aa		4.13	□□□□□ -1.75
SCFD1-223	ENST00000557076	CDH11	P55287	796 aa		4.13	□□□□□ -1.75
SCFD1-223	ENST00000557076	TPD52	P55327	224 aa	Predicted RBP	4.13	□□□□□ -1.75
SCFD1-223	ENST00000557076	UBASH3A	P57075	661 aa		4.13	□□□□□ -1.75
SCFD1-223	ENST00000557076	SESN3	P58005	492 aa		4.13	□□□□□ -1.75
SCFD1-223	ENST00000557076	RPS3A	P61247	264 aa	Known RBP	4.13	□□□□□ -1.75
SCFD1-223	ENST00000557076	CDK16	Q00536	496 aa		4.13	□□□□□ -1.75
SCFD1-223	ENST00000557076	CHRNB3	Q05901	458 aa		4.13	□□□□□ -1.75
SCFD1-223	ENST00000557076	ITGAD	Q13349	1161 aa		4.13	□□□□□ -1.75
SCFD1-223	ENST00000557076	KLF1	Q13351	362 aa	Predicted RBP	4.13	□□□□□ -1.75
SCFD1-223	ENST00000557076	DOC2A	Q14183	400 aa		4.13	□□□□□ -1.75

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