RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 ZNF264O43296 627 aa15.86■□□□□ 0.13
SHMT2-225ENST00000556798 CSTAP01040 98 aa15.86■□□□□ 0.13
SHMT2-225ENST00000556798 NUDT2P50583 147 aa15.86■□□□□ 0.13
SHMT2-225ENST00000556798 PLAURQ03405 335 aa15.86■□□□□ 0.13
SHMT2-225ENST00000556798 SCARB2Q14108 478 aa15.86■□□□□ 0.13
SHMT2-225ENST00000556798 GNA13Q14344 377 aa15.86■□□□□ 0.13
SHMT2-225ENST00000556798 GANABQ14697 944 aaKnown RBP15.86■□□□□ 0.13
SHMT2-225ENST00000556798 RAET1LQ5VY80 246 aa15.86■□□□□ 0.13
SHMT2-225ENST00000556798 AP1ARQ63HQ0 302 aa15.86■□□□□ 0.13
SHMT2-225ENST00000556798 C3P1Q6ZMU1 363 aa15.86■□□□□ 0.13
SHMT2-225ENST00000556798 VRK2Q86Y07 508 aa15.86■□□□□ 0.13
SHMT2-225ENST00000556798 PTOV1Q86YD1 416 aa15.86■□□□□ 0.13
SHMT2-225ENST00000556798 PEX5LQ8IYB4 626 aa15.86■□□□□ 0.13
SHMT2-225ENST00000556798 ANKS4BQ8N8V4 417 aa15.86■□□□□ 0.13
SHMT2-225ENST00000556798 OR8J3Q8NGG0 315 aa15.86■□□□□ 0.13
SHMT2-225ENST00000556798 OR5M9Q8NGP3 310 aa15.86■□□□□ 0.13
SHMT2-225ENST00000556798 BBS10Q8TAM1 723 aa15.86■□□□□ 0.13
SHMT2-225ENST00000556798 FAM57AQ8TBR7 257 aa15.86■□□□□ 0.13
SHMT2-225ENST00000556798 CMTM5Q96DZ9 223 aa15.86■□□□□ 0.13
SHMT2-225ENST00000556798 DTNBP1Q96EV8 351 aa15.86■□□□□ 0.13
SHMT2-225ENST00000556798 SFXN2Q96NB2 322 aa15.86■□□□□ 0.13
SHMT2-225ENST00000556798 TMEM38AQ9H6F2 299 aa15.86■□□□□ 0.13
SHMT2-225ENST00000556798 PNPLA3Q9NST1 481 aa15.86■□□□□ 0.13
SHMT2-225ENST00000556798 SUCOQ9UBS9 1254 aaKnown RBP15.86■□□□□ 0.13
SHMT2-225ENST00000556798 ACAD8Q9UKU7 415 aa15.86■□□□□ 0.13
SHMT2-225ENST00000556798 ICAM5Q9UMF0 924 aa15.86■□□□□ 0.13
SHMT2-225ENST00000556798 KIAA1549Q9HCM3 1950 aa15.86■□□□□ 0.13
SHMT2-225ENST00000556798 A0A0G2JPF8 293 aa15.85■□□□□ 0.13
SHMT2-225ENST00000556798 OR14I1A6ND48 311 aa15.85■□□□□ 0.13
SHMT2-225ENST00000556798 HNRNPCL2B2RXH8 293 aa15.85■□□□□ 0.13
SHMT2-225ENST00000556798 HNRNPCL3B7ZW38 293 aa15.85■□□□□ 0.13
SHMT2-225ENST00000556798 NDUFAB1O14561 156 aa15.85■□□□□ 0.13
SHMT2-225ENST00000556798 PRRG2O14669 202 aa15.85■□□□□ 0.13
SHMT2-225ENST00000556798 HNRNPCL1O60812 293 aaKnown RBP15.85■□□□□ 0.13
SHMT2-225ENST00000556798 PGM3O95394 542 aa15.85■□□□□ 0.13
SHMT2-225ENST00000556798 NUDT14O95848 222 aa15.85■□□□□ 0.13
SHMT2-225ENST00000556798 NPPAP01160 153 aa15.85■□□□□ 0.13
SHMT2-225ENST00000556798 DBIP07108 87 aaKnown RBP15.85■□□□□ 0.13
SHMT2-225ENST00000556798 STSP08842 583 aa15.85■□□□□ 0.13
SHMT2-225ENST00000556798 HNRNPCL4P0DMR1 293 aa15.85■□□□□ 0.13
SHMT2-225ENST00000556798 IL7RP16871 459 aa15.85■□□□□ 0.13
SHMT2-225ENST00000556798 BMP7P18075 431 aa15.85■□□□□ 0.13
SHMT2-225ENST00000556798 SLC6A2P23975 617 aa15.85■□□□□ 0.13
SHMT2-225ENST00000556798 MSX1P28360 303 aa15.85■□□□□ 0.13
SHMT2-225ENST00000556798 AQP1P29972 269 aa15.85■□□□□ 0.13
SHMT2-225ENST00000556798 PRDX6P30041 224 aa15.85■□□□□ 0.13
SHMT2-225ENST00000556798 PGM1P36871 562 aa15.85■□□□□ 0.13
SHMT2-225ENST00000556798 P2RX1P51575 399 aa15.85■□□□□ 0.13
SHMT2-225ENST00000556798 B3GALT5-AS1P59052 145 aa15.85■□□□□ 0.13
SHMT2-225ENST00000556798 KCNJ10P78508 379 aa15.85■□□□□ 0.13
SHMT2-225ENST00000556798 CRYZQ08257 329 aaKnown RBP15.85■□□□□ 0.13
SHMT2-225ENST00000556798 SKP2Q13309 424 aa15.85■□□□□ 0.13
SHMT2-225ENST00000556798 ZNF836Q6ZNA1 936 aa15.85■□□□□ 0.13
SHMT2-225ENST00000556798 Q6ZPB1 254 aaPredicted RBP15.85■□□□□ 0.13
SHMT2-225ENST00000556798 EIF3MQ7L2H7 374 aaKnown RBP15.85■□□□□ 0.13
SHMT2-225ENST00000556798 ZZZ3Q8IYH5 903 aa15.85■□□□□ 0.13
SHMT2-225ENST00000556798 FAM71CQ8NEG0 241 aa15.85■□□□□ 0.13
SHMT2-225ENST00000556798 OR52P1PQ8NH57 321 aa15.85■□□□□ 0.13
SHMT2-225ENST00000556798 BCAS4Q8TDM0 211 aa15.85■□□□□ 0.13
SHMT2-225ENST00000556798 SARAFQ96BY9 339 aa15.85■□□□□ 0.13
SHMT2-225ENST00000556798 NPAS1Q99742 590 aa15.85■□□□□ 0.13
SHMT2-225ENST00000556798 UGT2B28Q9BY64 529 aa15.85■□□□□ 0.13
SHMT2-225ENST00000556798 EFCAB1Q9HAE3 211 aa15.85■□□□□ 0.13
SHMT2-225ENST00000556798 HHATLQ9HCP6 504 aa15.85■□□□□ 0.13
SHMT2-225ENST00000556798 BCL2L10Q9HD36 194 aa15.85■□□□□ 0.13
SHMT2-225ENST00000556798 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.85■□□□□ 0.13
SHMT2-225ENST00000556798 MED17Q9NVC6 651 aa15.85■□□□□ 0.13
SHMT2-225ENST00000556798 ARL8BQ9NVJ2 186 aa15.85■□□□□ 0.13
SHMT2-225ENST00000556798 USP22Q9UPT9 525 aa15.85■□□□□ 0.13
SHMT2-225ENST00000556798 ZNF443Q9Y2A4 671 aaPredicted RBP15.85■□□□□ 0.13
SHMT2-225ENST00000556798 MRPS18CQ9Y3D5 142 aaKnown RBP15.85■□□□□ 0.13
SHMT2-225ENST00000556798 FAM47E-STBD1D6RA91 191 aa15.84■□□□□ 0.13
SHMT2-225ENST00000556798 EIF4E2O60573 245 aaKnown RBP15.84■□□□□ 0.13
SHMT2-225ENST00000556798 SEMA7AO75326 666 aa15.84■□□□□ 0.13
SHMT2-225ENST00000556798 NID1P14543 1247 aa15.84■□□□□ 0.13
SHMT2-225ENST00000556798 ADH7P40394 386 aa15.84■□□□□ 0.13
SHMT2-225ENST00000556798 CA7P43166 264 aa15.84■□□□□ 0.13
SHMT2-225ENST00000556798 STARP49675 285 aa15.84■□□□□ 0.13
SHMT2-225ENST00000556798 GZMMP51124 257 aa15.84■□□□□ 0.13
SHMT2-225ENST00000556798 ZNF41P51814 821 aaPredicted RBP15.84■□□□□ 0.13
SHMT2-225ENST00000556798 GFRA1P56159 465 aa15.84■□□□□ 0.13
SHMT2-225ENST00000556798 KCNC4Q03721 635 aa15.84■□□□□ 0.13
SHMT2-225ENST00000556798 ART3Q13508 389 aa15.84■□□□□ 0.13
SHMT2-225ENST00000556798 TOMM34Q15785 309 aaPredicted RBP15.84■□□□□ 0.13
SHMT2-225ENST00000556798 PLPPR5Q32ZL2 321 aa15.84■□□□□ 0.13
SHMT2-225ENST00000556798 EMC4Q5J8M3 183 aa15.84■□□□□ 0.13
SHMT2-225ENST00000556798 MRPL2Q5T653 305 aaKnown RBP15.84■□□□□ 0.13
SHMT2-225ENST00000556798 PRAMEF8Q5VWM4 474 aa15.84■□□□□ 0.13
SHMT2-225ENST00000556798 PRAMEF7Q5VXH5 474 aa15.84■□□□□ 0.13
SHMT2-225ENST00000556798 REEP3Q6NUK4 255 aa15.84■□□□□ 0.13
SHMT2-225ENST00000556798 NET1Q7Z628 596 aaPredicted RBP15.84■□□□□ 0.13
SHMT2-225ENST00000556798 SERPINA11Q86U17 422 aa15.84■□□□□ 0.13
SHMT2-225ENST00000556798 FJX1Q86VR8 437 aa15.84■□□□□ 0.13
SHMT2-225ENST00000556798 DOLPP1Q86YN1 238 aa15.84■□□□□ 0.13
SHMT2-225ENST00000556798 FITM2Q8N6M3 262 aa15.84■□□□□ 0.13
SHMT2-225ENST00000556798 C11orf65Q8NCR3 313 aa15.84■□□□□ 0.13
SHMT2-225ENST00000556798 OIT3Q8WWZ8 545 aa15.84■□□□□ 0.13
SHMT2-225ENST00000556798 CNOT9Q92600 299 aaKnown RBP15.84■□□□□ 0.13
SHMT2-225ENST00000556798 ABTB1Q969K4 478 aaPredicted RBP15.84■□□□□ 0.13
SHMT2-225ENST00000556798 SH3GL1Q99961 368 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms