RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 PTGR1Q14914 329 aa6.62□□□□□ -1.35
SCFD1-222ENST00000556768 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.62□□□□□ -1.35
SCFD1-222ENST00000556768 PRSS53Q2L4Q9 553 aa6.62□□□□□ -1.35
SCFD1-222ENST00000556768 FLYWCH1Q4VC44 716 aa6.62□□□□□ -1.35
SCFD1-222ENST00000556768 XKR7Q5GH72 579 aa6.62□□□□□ -1.35
SCFD1-222ENST00000556768 DCST1Q5T197 706 aa6.62□□□□□ -1.35
SCFD1-222ENST00000556768 PDSS1Q5T2R2 415 aa6.62□□□□□ -1.35
SCFD1-222ENST00000556768 PPP4R4Q6NUP7 873 aa6.62□□□□□ -1.35
SCFD1-222ENST00000556768 MFSD12Q6NUT3 480 aa6.62□□□□□ -1.35
SCFD1-222ENST00000556768 LUZP2Q86TE4 346 aa6.62□□□□□ -1.35
SCFD1-222ENST00000556768 FADS6Q8N9I5 356 aa6.62□□□□□ -1.35
SCFD1-222ENST00000556768 OR2M3Q8NG83 312 aa6.62□□□□□ -1.35
SCFD1-222ENST00000556768 OR7A2PQ8NGA2 310 aa6.62□□□□□ -1.35
SCFD1-222ENST00000556768 OR4C3Q8NH37 302 aa6.62□□□□□ -1.35
SCFD1-222ENST00000556768 ARL8AQ96BM9 186 aa6.62□□□□□ -1.35
SCFD1-222ENST00000556768 FAM120BQ96EK7 910 aaKnown RBP6.62□□□□□ -1.35
SCFD1-222ENST00000556768 C1GALT1C1Q96EU7 318 aa6.62□□□□□ -1.35
SCFD1-222ENST00000556768 REXO5Q96IC2 774 aaKnown RBP6.62□□□□□ -1.35
SCFD1-222ENST00000556768 STACQ99469 402 aa6.62□□□□□ -1.35
SCFD1-222ENST00000556768 SLC39A3Q9BRY0 314 aa6.62□□□□□ -1.35
SCFD1-222ENST00000556768 YIPF4Q9BSR8 244 aa6.62□□□□□ -1.35
SCFD1-222ENST00000556768 DUSP26Q9BV47 211 aa6.62□□□□□ -1.35
SCFD1-222ENST00000556768 RBM24Q9BX46 236 aaKnown RBP6.62□□□□□ -1.35
SCFD1-222ENST00000556768 POLDIP3Q9BY77 421 aaKnown RBP6.62□□□□□ -1.35
SCFD1-222ENST00000556768 ACTRT3Q9BYD9 372 aa6.62□□□□□ -1.35
SCFD1-222ENST00000556768 PIGUQ9H490 435 aa6.62□□□□□ -1.35
SCFD1-222ENST00000556768 FANCFQ9NPI8 374 aa6.62□□□□□ -1.35
SCFD1-222ENST00000556768 GIN1Q9NXP7 522 aa6.62□□□□□ -1.35
SCFD1-222ENST00000556768 CRIM1Q9NZV1 1036 aa6.62□□□□□ -1.35
SCFD1-222ENST00000556768 PACSIN3Q9UKS6 424 aa6.62□□□□□ -1.35
SCFD1-222ENST00000556768 RAP2CQ9Y3L5 183 aa6.62□□□□□ -1.35
SCFD1-222ENST00000556768 ZNF337Q9Y3M9 751 aa6.62□□□□□ -1.35
SCFD1-222ENST00000556768 L3MBTL1Q9Y468 752 aa6.62□□□□□ -1.35
SCFD1-222ENST00000556768 AP4B1Q9Y6B7 739 aa6.62□□□□□ -1.35
SCFD1-222ENST00000556768 AKAP9Q99996 3911 aa6.62□□□□□ -1.35
SCFD1-222ENST00000556768 SPG11Q96JI7 2443 aa6.62□□□□□ -1.35
SCFD1-222ENST00000556768 PDZD2O15018 2839 aa6.62□□□□□ -1.35
SCFD1-222ENST00000556768 GXYLT2A0PJZ3 443 aa6.62□□□□□ -1.35
SCFD1-222ENST00000556768 OR2M5A3KFT3 312 aa6.62□□□□□ -1.35
SCFD1-222ENST00000556768 GTPBP1O00178 669 aaKnown RBP6.62□□□□□ -1.35
SCFD1-222ENST00000556768 SEC14L5O43304 696 aa6.62□□□□□ -1.35
SCFD1-222ENST00000556768 CTAG2O75638 210 aa6.62□□□□□ -1.35
SCFD1-222ENST00000556768 OXSR1O95747 527 aaPredicted RBP6.62□□□□□ -1.35
SCFD1-222ENST00000556768 PLGP00747 810 aaPredicted RBP6.62□□□□□ -1.35
SCFD1-222ENST00000556768 G6PDP11413 515 aa6.62□□□□□ -1.35
SCFD1-222ENST00000556768 EPXP11678 715 aa6.62□□□□□ -1.35
SCFD1-222ENST00000556768 EIF1P41567 113 aaKnown RBP6.62□□□□□ -1.35
SCFD1-222ENST00000556768 KCNJ5P48544 419 aa6.62□□□□□ -1.35
SCFD1-222ENST00000556768 DLX5P56178 289 aa6.62□□□□□ -1.35
SCFD1-222ENST00000556768 CLDN18P56856 261 aa6.62□□□□□ -1.35
SCFD1-222ENST00000556768 OCRLQ01968 901 aa6.62□□□□□ -1.35
SCFD1-222ENST00000556768 PDCD2Q16342 344 aaPredicted RBP6.62□□□□□ -1.35
SCFD1-222ENST00000556768 DUSP5Q16690 384 aa6.62□□□□□ -1.35
SCFD1-222ENST00000556768 GRAMD1BQ3KR37 738 aa6.62□□□□□ -1.35
SCFD1-222ENST00000556768 ZNF385BQ569K4 471 aa6.62□□□□□ -1.35
SCFD1-222ENST00000556768 ZBTB37Q5TC79 503 aa6.62□□□□□ -1.35
SCFD1-222ENST00000556768 ANXA8L1Q5VT79 327 aa6.62□□□□□ -1.35
SCFD1-222ENST00000556768 GTF2IRD2BQ6EKJ0 949 aa6.62□□□□□ -1.35
SCFD1-222ENST00000556768 GALNT10Q86SR1 603 aa6.62□□□□□ -1.35
SCFD1-222ENST00000556768 GTF2IRD2Q86UP8 949 aa6.62□□□□□ -1.35
SCFD1-222ENST00000556768 GCNT2Q8N0V5 402 aa6.62□□□□□ -1.35
SCFD1-222ENST00000556768 CNEP1R1Q8N9A8 125 aa6.62□□□□□ -1.35
SCFD1-222ENST00000556768 C9orf106Q8NAJ2 232 aa6.62□□□□□ -1.35
SCFD1-222ENST00000556768 FBXO30Q8TB52 745 aa6.62□□□□□ -1.35
SCFD1-222ENST00000556768 ACTRT2Q8TDY3 377 aa6.62□□□□□ -1.35
SCFD1-222ENST00000556768 NUDT8Q8WV74 236 aa6.62□□□□□ -1.35
SCFD1-222ENST00000556768 RNF138Q8WVD3 245 aa6.62□□□□□ -1.35
SCFD1-222ENST00000556768 SMPDL3BQ92485 455 aa6.62□□□□□ -1.35
SCFD1-222ENST00000556768 ZBTB8AQ96BR9 441 aa6.62□□□□□ -1.35
SCFD1-222ENST00000556768 COQ8BQ96D53 544 aa6.62□□□□□ -1.35
SCFD1-222ENST00000556768 PGM2Q96G03 612 aa6.62□□□□□ -1.35
SCFD1-222ENST00000556768 C16orf58Q96GQ5 468 aa6.62□□□□□ -1.35
SCFD1-222ENST00000556768 PKNOX2Q96KN3 472 aa6.62□□□□□ -1.35
SCFD1-222ENST00000556768 PPP1R36Q96LQ0 422 aa6.62□□□□□ -1.35
SCFD1-222ENST00000556768 C3orf30Q96M34 536 aa6.62□□□□□ -1.35
SCFD1-222ENST00000556768 DPY30Q9C005 99 aa6.62□□□□□ -1.35
SCFD1-222ENST00000556768 TIGARQ9NQ88 270 aa6.62□□□□□ -1.35
SCFD1-222ENST00000556768 RAB21Q9UL25 225 aa6.62□□□□□ -1.35
SCFD1-222ENST00000556768 VDAC3Q9Y277 283 aa6.62□□□□□ -1.35
SCFD1-222ENST00000556768 ANKHD1Q8IWZ3 2542 aaKnown RBP6.61□□□□□ -1.35
SCFD1-222ENST00000556768 ELOA3CA0A087WX78 387 aaPredicted RBP6.61□□□□□ -1.35
SCFD1-222ENST00000556768 IGLV3-32A0A0A0MS00 114 aa6.61□□□□□ -1.35
SCFD1-222ENST00000556768 A0A1W2PQD3 144 aa6.61□□□□□ -1.35
SCFD1-222ENST00000556768 ELOA3DA6NLF2 546 aaPredicted RBP6.61□□□□□ -1.35
SCFD1-222ENST00000556768 MSTNO14793 375 aa6.61□□□□□ -1.35
SCFD1-222ENST00000556768 TBX1O43435 398 aa6.61□□□□□ -1.35
SCFD1-222ENST00000556768 HCRTR2O43614 444 aa6.61□□□□□ -1.35
SCFD1-222ENST00000556768 GOSR1O95249 250 aa6.61□□□□□ -1.35
SCFD1-222ENST00000556768 SYNGR4O95473 234 aa6.61□□□□□ -1.35
SCFD1-222ENST00000556768 C6orf47O95873 294 aa6.61□□□□□ -1.35
SCFD1-222ENST00000556768 AGR2O95994 175 aa6.61□□□□□ -1.35
SCFD1-222ENST00000556768 PABPC4LP0CB38 370 aaKnown RBP6.61□□□□□ -1.35
SCFD1-222ENST00000556768 ZNF17P17021 662 aa6.61□□□□□ -1.35
SCFD1-222ENST00000556768 EFNA1P20827 205 aaPredicted RBP6.61□□□□□ -1.35
SCFD1-222ENST00000556768 NTF4P34130 210 aa6.61□□□□□ -1.35
SCFD1-222ENST00000556768 SOAT1P35610 550 aa6.61□□□□□ -1.35
SCFD1-222ENST00000556768 MAP3K8P41279 467 aa6.61□□□□□ -1.35
SCFD1-222ENST00000556768 CLDN8P56748 225 aa6.61□□□□□ -1.35
SCFD1-222ENST00000556768 KRTAP10-9P60411 292 aa6.61□□□□□ -1.35
SCFD1-222ENST00000556768 SNTB1Q13884 538 aaKnown RBP6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms