RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 SNRPGP62308 76 aaKnown RBP4.11□□□□□ -1.75
ATXN3-241ENST00000556374 PPP3R1P63098 170 aa4.11□□□□□ -1.75
ATXN3-241ENST00000556374 HBA1P69905 142 aa4.11□□□□□ -1.75
ATXN3-241ENST00000556374 PSPHP78330 225 aa4.11□□□□□ -1.75
ATXN3-241ENST00000556374 RAE1P78406 368 aaKnown RBP4.11□□□□□ -1.75
ATXN3-241ENST00000556374 SIM1P81133 766 aaPredicted RBP4.11□□□□□ -1.75
ATXN3-241ENST00000556374 IFITM3Q01628 133 aa4.11□□□□□ -1.75
ATXN3-241ENST00000556374 ZNF91Q05481 1191 aa4.11□□□□□ -1.75
ATXN3-241ENST00000556374 TMEM115Q12893 351 aaPredicted RBP4.11□□□□□ -1.75
ATXN3-241ENST00000556374 FOXD4Q12950 439 aaPredicted RBP4.11□□□□□ -1.75
ATXN3-241ENST00000556374 HSPB3Q12988 150 aa4.11□□□□□ -1.75
ATXN3-241ENST00000556374 MLLT11Q13015 90 aaPredicted RBP4.11□□□□□ -1.75
ATXN3-241ENST00000556374 MALLQ13021 153 aa4.11□□□□□ -1.75
ATXN3-241ENST00000556374 IRF3Q14653 427 aa4.11□□□□□ -1.75
ATXN3-241ENST00000556374 PTGES3Q15185 160 aaKnown RBP4.11□□□□□ -1.75
ATXN3-241ENST00000556374 SPHARQ15513 63 aa4.11□□□□□ -1.75
ATXN3-241ENST00000556374 TAB1Q15750 504 aa4.11□□□□□ -1.75
ATXN3-241ENST00000556374 KCNJ8Q15842 424 aa4.11□□□□□ -1.75
ATXN3-241ENST00000556374 BCL2A1Q16548 175 aa4.11□□□□□ -1.75
ATXN3-241ENST00000556374 KLHL22Q53GT1 634 aa4.11□□□□□ -1.75
ATXN3-241ENST00000556374 PYDC2Q56P42 97 aa4.11□□□□□ -1.75
ATXN3-241ENST00000556374 ZNF805Q5CZA5 627 aa4.11□□□□□ -1.75
ATXN3-241ENST00000556374 DDI2Q5TDH0 399 aa4.11□□□□□ -1.75
ATXN3-241ENST00000556374 LCN1P1Q5VSP4 162 aa4.11□□□□□ -1.75
ATXN3-241ENST00000556374 KIAA0895LQ68EN5 471 aa4.11□□□□□ -1.75
ATXN3-241ENST00000556374 THOC7Q6I9Y2 204 aaKnown RBP4.11□□□□□ -1.75
ATXN3-241ENST00000556374 FAM71E1Q6IPT2 247 aa4.11□□□□□ -1.75
ATXN3-241ENST00000556374 ANKRD54Q6NXT1 300 aa4.11□□□□□ -1.75
ATXN3-241ENST00000556374 TNFAIP8L2Q6P589 184 aaPredicted RBP4.11□□□□□ -1.75
ATXN3-241ENST00000556374 XKRXQ6PP77 449 aa4.11□□□□□ -1.75
ATXN3-241ENST00000556374 TMEM220Q6QAJ8 160 aa4.11□□□□□ -1.75
ATXN3-241ENST00000556374 KLHL17Q6TDP4 642 aa4.11□□□□□ -1.75
ATXN3-241ENST00000556374 PLET1Q6UQ28 207 aa4.11□□□□□ -1.75
ATXN3-241ENST00000556374 LCTLQ6UWM7 567 aa4.11□□□□□ -1.75
ATXN3-241ENST00000556374 TMIGD1Q6UXZ0 262 aa4.11□□□□□ -1.75
ATXN3-241ENST00000556374 Q6ZPB1 254 aaPredicted RBP4.11□□□□□ -1.75
ATXN3-241ENST00000556374 RFLNAQ6ZTI6 216 aa4.11□□□□□ -1.75
ATXN3-241ENST00000556374 RRM2BQ7LG56 351 aa4.11□□□□□ -1.75
ATXN3-241ENST00000556374 ZNF551Q7Z340 670 aaPredicted RBP4.11□□□□□ -1.75
ATXN3-241ENST00000556374 HSD11B1LQ7Z5J1 315 aa4.11□□□□□ -1.75
ATXN3-241ENST00000556374 CCDC71Q8IV32 467 aaPredicted RBP4.11□□□□□ -1.75
ATXN3-241ENST00000556374 LAS2Q8IYD9 372 aa4.11□□□□□ -1.75
ATXN3-241ENST00000556374 GPR65Q8IYL9 337 aa4.11□□□□□ -1.75
ATXN3-241ENST00000556374 CFAP206Q8IYR0 622 aa4.11□□□□□ -1.75
ATXN3-241ENST00000556374 CLDN22Q8N7P3 220 aa4.11□□□□□ -1.75
ATXN3-241ENST00000556374 RASGEF1AQ8N9B8 481 aa4.11□□□□□ -1.75
ATXN3-241ENST00000556374 C19orf18Q8NEA5 215 aa4.11□□□□□ -1.75
ATXN3-241ENST00000556374 TTLQ8NG68 377 aa4.11□□□□□ -1.75
ATXN3-241ENST00000556374 OR8J1Q8NGP2 316 aa4.11□□□□□ -1.75
ATXN3-241ENST00000556374 VANGL1Q8TAA9 524 aaPredicted RBP4.11□□□□□ -1.75
ATXN3-241ENST00000556374 HCAR2Q8TDS4 363 aa4.11□□□□□ -1.75
ATXN3-241ENST00000556374 GPR151Q8TDV0 419 aa4.11□□□□□ -1.75
ATXN3-241ENST00000556374 CXorf40AQ8TE69 158 aa4.11□□□□□ -1.75
ATXN3-241ENST00000556374 SETD7Q8WTS6 366 aaKnown RBP4.11□□□□□ -1.75
ATXN3-241ENST00000556374 OR8D1Q8WZ84 308 aa4.11□□□□□ -1.75
ATXN3-241ENST00000556374 SMPDL3AQ92484 453 aa4.11□□□□□ -1.75
ATXN3-241ENST00000556374 RFKQ969G6 155 aa4.11□□□□□ -1.75
ATXN3-241ENST00000556374 NEIL2Q969S2 332 aa4.11□□□□□ -1.75
ATXN3-241ENST00000556374 CIDECQ96AQ7 238 aaPredicted RBP4.11□□□□□ -1.75
ATXN3-241ENST00000556374 KIAA1143Q96AT1 154 aaPredicted RBP4.11□□□□□ -1.75
ATXN3-241ENST00000556374 RAD51AP1Q96B01 352 aa4.11□□□□□ -1.75
ATXN3-241ENST00000556374 MOAP1Q96BY2 351 aa4.11□□□□□ -1.75
ATXN3-241ENST00000556374 ZNF689Q96CS4 500 aaPredicted RBP4.11□□□□□ -1.75
ATXN3-241ENST00000556374 OTUB2Q96DC9 234 aa4.11□□□□□ -1.75
ATXN3-241ENST00000556374 NEURL3Q96EH8 262 aa4.11□□□□□ -1.75
ATXN3-241ENST00000556374 WDR34Q96EX3 536 aa4.11□□□□□ -1.75
ATXN3-241ENST00000556374 TMEM19Q96HH6 336 aa4.11□□□□□ -1.75
ATXN3-241ENST00000556374 ZNF354BQ96LW1 612 aa4.11□□□□□ -1.75
ATXN3-241ENST00000556374 CAMK1GQ96NX5 476 aa4.11□□□□□ -1.75
ATXN3-241ENST00000556374 WDFY2Q96P53 400 aa4.11□□□□□ -1.75
ATXN3-241ENST00000556374 SLC22A12Q96S37 553 aa4.11□□□□□ -1.75
ATXN3-241ENST00000556374 NELL2Q99435 816 aa4.11□□□□□ -1.75
ATXN3-241ENST00000556374 CTRCQ99895 268 aa4.11□□□□□ -1.75
ATXN3-241ENST00000556374 CENPOQ9BU64 300 aa4.11□□□□□ -1.75
ATXN3-241ENST00000556374 WRAP53Q9BUR4 548 aaKnown RBP4.11□□□□□ -1.75
ATXN3-241ENST00000556374 FNDC11Q9BVV2 318 aa4.11□□□□□ -1.75
ATXN3-241ENST00000556374 TSSK6Q9BXA6 273 aa4.11□□□□□ -1.75
ATXN3-241ENST00000556374 POLR2J2Q9GZM3 115 aaKnown RBP4.11□□□□□ -1.75
ATXN3-241ENST00000556374 NDEL1Q9GZM8 345 aa4.11□□□□□ -1.75
ATXN3-241ENST00000556374 HOXD1Q9GZZ0 328 aa4.11□□□□□ -1.75
ATXN3-241ENST00000556374 BTBD1Q9H0C5 482 aa4.11□□□□□ -1.75
ATXN3-241ENST00000556374 POLR2J3Q9H1A7 115 aaKnown RBP4.11□□□□□ -1.75
ATXN3-241ENST00000556374 S1PR5Q9H228 398 aa4.11□□□□□ -1.75
ATXN3-241ENST00000556374 ANKRA2Q9H9E1 313 aa4.11□□□□□ -1.75
ATXN3-241ENST00000556374 PELI2Q9HAT8 420 aa4.11□□□□□ -1.75
ATXN3-241ENST00000556374 AMBNQ9NP70 447 aa4.11□□□□□ -1.75
ATXN3-241ENST00000556374 SNTG1Q9NSN8 517 aa4.11□□□□□ -1.75
ATXN3-241ENST00000556374 KLHL28Q9NXS3 571 aa4.11□□□□□ -1.75
ATXN3-241ENST00000556374 ZNF226Q9NYT6 803 aa4.11□□□□□ -1.75
ATXN3-241ENST00000556374 DNAJC27Q9NZQ0 273 aa4.11□□□□□ -1.75
ATXN3-241ENST00000556374 LRIT1Q9P2V4 623 aa4.11□□□□□ -1.75
ATXN3-241ENST00000556374 DKK3Q9UBP4 350 aa4.11□□□□□ -1.75
ATXN3-241ENST00000556374 ASF1AQ9Y294 204 aa4.11□□□□□ -1.75
ATXN3-241ENST00000556374 TRAPPC4Q9Y296 219 aa4.11□□□□□ -1.75
ATXN3-241ENST00000556374 RBMX2Q9Y388 322 aaKnown RBP4.11□□□□□ -1.75
ATXN3-241ENST00000556374 EXOSC1Q9Y3B2 195 aaKnown RBP4.11□□□□□ -1.75
ATXN3-241ENST00000556374 PCDHGB2Q9Y5G2 931 aa4.11□□□□□ -1.75
ATXN3-241ENST00000556374 ITPR1Q14643 2758 aa4.11□□□□□ -1.75
ATXN3-241ENST00000556374 TICRRQ7Z2Z1 1910 aa4.11□□□□□ -1.75
ATXN3-241ENST00000556374 ANAPC1Q9H1A4 1944 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms