RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 KLF18A0A0U1RQI7 1052 aa2.06□□□□□ -2.08
SCFD1-218ENST00000556256 PEX11AO75192 247 aa2.06□□□□□ -2.08
SCFD1-218ENST00000556256 NEBLO76041 1014 aa2.06□□□□□ -2.08
SCFD1-218ENST00000556256 UFL1O94874 794 aa2.06□□□□□ -2.08
SCFD1-218ENST00000556256 IGHV3-23P01764 117 aa2.06□□□□□ -2.08
SCFD1-218ENST00000556256 CSF2P04141 144 aa2.06□□□□□ -2.08
SCFD1-218ENST00000556256 CLUP10909 449 aa2.06□□□□□ -2.08
SCFD1-218ENST00000556256 HSPA5P11021 654 aaKnown RBP2.06□□□□□ -2.08
SCFD1-218ENST00000556256 CPN1P15169 458 aa2.06□□□□□ -2.08
SCFD1-218ENST00000556256 GCFC2P16383 781 aaKnown RBP2.06□□□□□ -2.08
SCFD1-218ENST00000556256 DESP17661 470 aa2.06□□□□□ -2.08
SCFD1-218ENST00000556256 DRD5P21918 477 aa2.06□□□□□ -2.08
SCFD1-218ENST00000556256 ATP5A1P25705 553 aaKnown RBP2.06□□□□□ -2.08
SCFD1-218ENST00000556256 NF2P35240 595 aa2.06□□□□□ -2.08
SCFD1-218ENST00000556256 DLSTP36957 453 aa2.06□□□□□ -2.08
SCFD1-218ENST00000556256 NTHL1P78549 312 aa2.06□□□□□ -2.08
SCFD1-218ENST00000556256 BDH1Q02338 343 aa2.06□□□□□ -2.08
SCFD1-218ENST00000556256 CSTF1Q05048 431 aaKnown RBP2.06□□□□□ -2.08
SCFD1-218ENST00000556256 RGS1Q08116 209 aa2.06□□□□□ -2.08
SCFD1-218ENST00000556256 KLHL30Q0D2K2 578 aa2.06□□□□□ -2.08
SCFD1-218ENST00000556256 ELP6Q0PNE2 266 aa2.06□□□□□ -2.08
SCFD1-218ENST00000556256 OVGP1Q12889 678 aa2.06□□□□□ -2.08
SCFD1-218ENST00000556256 KIAA0040Q15053 153 aa2.06□□□□□ -2.08
SCFD1-218ENST00000556256 HSP90AA5PQ58FG0 334 aa2.06□□□□□ -2.08
SCFD1-218ENST00000556256 DNAJC21Q5F1R6 531 aaKnown RBP2.06□□□□□ -2.08
SCFD1-218ENST00000556256 METTL11BQ5VVY1 283 aa2.06□□□□□ -2.08
SCFD1-218ENST00000556256 CXCL17Q6UXB2 119 aa2.06□□□□□ -2.08
SCFD1-218ENST00000556256 LRRC70Q7Z2Q7 622 aa2.06□□□□□ -2.08
SCFD1-218ENST00000556256 DPY19L4Q7Z388 723 aa2.06□□□□□ -2.08
SCFD1-218ENST00000556256 TMEM17Q86X19 198 aa2.06□□□□□ -2.08
SCFD1-218ENST00000556256 C17orf82Q86X59 251 aaPredicted RBP2.06□□□□□ -2.08
SCFD1-218ENST00000556256 ZNF677Q86XU0 584 aa2.06□□□□□ -2.08
SCFD1-218ENST00000556256 APOBEC3FQ8IUX4 373 aaKnown RBP2.06□□□□□ -2.08
SCFD1-218ENST00000556256 UBQLNLQ8IYU4 475 aa2.06□□□□□ -2.08
SCFD1-218ENST00000556256 LINC01561Q8N1V8 128 aa2.06□□□□□ -2.08
SCFD1-218ENST00000556256 C15orf54Q8N8G6 183 aa2.06□□□□□ -2.08
SCFD1-218ENST00000556256 OR10T2Q8NGX3 314 aa2.06□□□□□ -2.08
SCFD1-218ENST00000556256 IL1F10Q8WWZ1 152 aa2.06□□□□□ -2.08
SCFD1-218ENST00000556256 RSPH1Q8WYR4 309 aa2.06□□□□□ -2.08
SCFD1-218ENST00000556256 PSMG2Q969U7 264 aa2.06□□□□□ -2.08
SCFD1-218ENST00000556256 SYAP1Q96A49 352 aaPredicted RBP2.06□□□□□ -2.08
SCFD1-218ENST00000556256 CTRCQ99895 268 aa2.06□□□□□ -2.08
SCFD1-218ENST00000556256 DUSP16Q9BY84 665 aa2.06□□□□□ -2.08
SCFD1-218ENST00000556256 GLT8D2Q9H1C3 349 aa2.06□□□□□ -2.08
SCFD1-218ENST00000556256 PPDPFQ9H3Y8 114 aa2.06□□□□□ -2.08
SCFD1-218ENST00000556256 TMEM9Q9P0T7 183 aa2.06□□□□□ -2.08
SCFD1-218ENST00000556256 CHRNA9Q9UGM1 479 aa2.06□□□□□ -2.08
SCFD1-218ENST00000556256 RIMS3Q9UJD0 308 aa2.06□□□□□ -2.08
SCFD1-218ENST00000556256 KIF3AQ9Y496 699 aa2.06□□□□□ -2.08
SCFD1-218ENST00000556256 AP1M2Q9Y6Q5 423 aa2.06□□□□□ -2.08
SCFD1-218ENST00000556256 ATP10DQ9P241 1426 aa2.06□□□□□ -2.08
SCFD1-218ENST00000556256 LOC100131303A0A0U1RQF7 123 aa2.05□□□□□ -2.08
SCFD1-218ENST00000556256 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.05□□□□□ -2.08
SCFD1-218ENST00000556256 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.05□□□□□ -2.08
SCFD1-218ENST00000556256 E7ENQ6 273 aa2.05□□□□□ -2.08
SCFD1-218ENST00000556256 E9PLD3 99 aa2.05□□□□□ -2.08
SCFD1-218ENST00000556256 PPIAL4DF5H284 164 aa2.05□□□□□ -2.08
SCFD1-218ENST00000556256 STX7O15400 261 aaKnown RBP2.05□□□□□ -2.08
SCFD1-218ENST00000556256 ZSCAN12O43309 604 aa2.05□□□□□ -2.08
SCFD1-218ENST00000556256 NOL3O60936 208 aaKnown RBP2.05□□□□□ -2.08
SCFD1-218ENST00000556256 GPX5O75715 221 aa2.05□□□□□ -2.08
SCFD1-218ENST00000556256 GUCA1CO95843 209 aa2.05□□□□□ -2.08
SCFD1-218ENST00000556256 F10P00742 488 aa2.05□□□□□ -2.08
SCFD1-218ENST00000556256 STSP08842 583 aa2.05□□□□□ -2.08
SCFD1-218ENST00000556256 ELK1P19419 428 aa2.05□□□□□ -2.08
SCFD1-218ENST00000556256 PSMA2P25787 234 aa2.05□□□□□ -2.08
SCFD1-218ENST00000556256 HPDP32754 393 aaPredicted RBP2.05□□□□□ -2.08
SCFD1-218ENST00000556256 CA8P35219 290 aa2.05□□□□□ -2.08
SCFD1-218ENST00000556256 MAGEA5P43359 124 aa2.05□□□□□ -2.08
SCFD1-218ENST00000556256 GNPDA1P46926 289 aa2.05□□□□□ -2.08
SCFD1-218ENST00000556256 RPL32P62910 135 aaKnown RBP2.05□□□□□ -2.08
SCFD1-218ENST00000556256 CNTN2Q02246 1040 aa2.05□□□□□ -2.08
SCFD1-218ENST00000556256 RIPPLY1Q0D2K3 151 aa2.05□□□□□ -2.08
SCFD1-218ENST00000556256 ST3GAL3Q11203 375 aa2.05□□□□□ -2.08
SCFD1-218ENST00000556256 LAGE3Q14657 143 aa2.05□□□□□ -2.08
SCFD1-218ENST00000556256 SLC5A12Q1EHB4 618 aa2.05□□□□□ -2.08
SCFD1-218ENST00000556256 XKR4Q5GH76 650 aa2.05□□□□□ -2.08
SCFD1-218ENST00000556256 C9orf129Q5T035 196 aaKnown RBP2.05□□□□□ -2.08
SCFD1-218ENST00000556256 OR8G2PQ6IF36 304 aa2.05□□□□□ -2.08
SCFD1-218ENST00000556256 PYHIN1Q6K0P9 492 aa2.05□□□□□ -2.08
SCFD1-218ENST00000556256 FAHD2BQ6P2I3 314 aaPredicted RBP2.05□□□□□ -2.08
SCFD1-218ENST00000556256 ARMCX2Q7L311 632 aa2.05□□□□□ -2.08
SCFD1-218ENST00000556256 MCOLN2Q8IZK6 566 aa2.05□□□□□ -2.08
SCFD1-218ENST00000556256 OR2T33Q8NG76 320 aa2.05□□□□□ -2.08
SCFD1-218ENST00000556256 OR2T34Q8NGX1 318 aa2.05□□□□□ -2.08
SCFD1-218ENST00000556256 RAET1EQ8TD07 263 aa2.05□□□□□ -2.08
SCFD1-218ENST00000556256 FAM3CQ92520 227 aa2.05□□□□□ -2.08
SCFD1-218ENST00000556256 RAB7BQ96AH8 199 aa2.05□□□□□ -2.08
SCFD1-218ENST00000556256 FAM122AQ96E09 287 aa2.05□□□□□ -2.08
SCFD1-218ENST00000556256 SDSLQ96GA7 329 aa2.05□□□□□ -2.08
SCFD1-218ENST00000556256 FAHD2AQ96GK7 314 aa2.05□□□□□ -2.08
SCFD1-218ENST00000556256 MCHR1Q99705 422 aa2.05□□□□□ -2.08
SCFD1-218ENST00000556256 TSSK1BQ9BXA7 367 aa2.05□□□□□ -2.08
SCFD1-218ENST00000556256 GSDMCQ9BYG8 508 aa2.05□□□□□ -2.08
SCFD1-218ENST00000556256 CAB39LQ9H9S4 337 aa2.05□□□□□ -2.08
SCFD1-218ENST00000556256 FLVCR1Q9Y5Y0 555 aa2.05□□□□□ -2.08
SCFD1-218ENST00000556256 A0A1W2PNV4 684 aa2.04□□□□□ -2.08
SCFD1-218ENST00000556256 GSAPA4D1B5 854 aa2.04□□□□□ -2.08
SCFD1-218ENST00000556256 EPOPA6NHQ4 379 aa2.04□□□□□ -2.08
SCFD1-218ENST00000556256 OR6C65A6NJZ3 312 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms