RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 SLC35A4Q96G79 324 aa6.05□□□□□ -1.44
ATXN3-236ENST00000556220 ADOQ96SZ5 270 aa6.05□□□□□ -1.44
ATXN3-236ENST00000556220 DHRS9Q9BPW9 319 aa6.05□□□□□ -1.44
ATXN3-236ENST00000556220 CENPKQ9BS16 269 aa6.05□□□□□ -1.44
ATXN3-236ENST00000556220 TMEM79Q9BSE2 394 aa6.05□□□□□ -1.44
ATXN3-236ENST00000556220 DSN1Q9H410 356 aa6.05□□□□□ -1.44
ATXN3-236ENST00000556220 CNOT10Q9H9A5 744 aaKnown RBP6.05□□□□□ -1.44
ATXN3-236ENST00000556220 WDR41Q9HAD4 459 aa6.05□□□□□ -1.44
ATXN3-236ENST00000556220 LYARQ9NX58 379 aaKnown RBP6.05□□□□□ -1.44
ATXN3-236ENST00000556220 ARMCX1Q9P291 453 aa6.05□□□□□ -1.44
ATXN3-236ENST00000556220 XPR1Q9UBH6 696 aa6.05□□□□□ -1.44
ATXN3-236ENST00000556220 ASIC3Q9UHC3 531 aa6.05□□□□□ -1.44
ATXN3-236ENST00000556220 BCAP29Q9UHQ4 241 aa6.05□□□□□ -1.44
ATXN3-236ENST00000556220 CORO1CQ9ULV4 474 aaPredicted RBP6.05□□□□□ -1.44
ATXN3-236ENST00000556220 AP4B1Q9Y6B7 739 aa6.05□□□□□ -1.44
ATXN3-236ENST00000556220 A0A0A6YYD5 115 aa6.04□□□□□ -1.44
ATXN3-236ENST00000556220 C17orf51A8MQB3 221 aa6.04□□□□□ -1.44
ATXN3-236ENST00000556220 GOLGA8MH3BSY2 632 aa6.04□□□□□ -1.44
ATXN3-236ENST00000556220 NDUFS8O00217 210 aa6.04□□□□□ -1.44
ATXN3-236ENST00000556220 DYNC1I1O14576 645 aa6.04□□□□□ -1.44
ATXN3-236ENST00000556220 ABCD4O14678 606 aa6.04□□□□□ -1.44
ATXN3-236ENST00000556220 TBX1O43435 398 aa6.04□□□□□ -1.44
ATXN3-236ENST00000556220 EEDO75530 441 aaKnown RBP6.04□□□□□ -1.44
ATXN3-236ENST00000556220 NTN1O95631 604 aa6.04□□□□□ -1.44
ATXN3-236ENST00000556220 FAM58BPP0C7Q3 252 aa6.04□□□□□ -1.44
ATXN3-236ENST00000556220 PCNAP12004 261 aa6.04□□□□□ -1.44
ATXN3-236ENST00000556220 CPMP14384 443 aa6.04□□□□□ -1.44
ATXN3-236ENST00000556220 PORP16435 677 aaPredicted RBP6.04□□□□□ -1.44
ATXN3-236ENST00000556220 ZNF37AP17032 561 aaPredicted RBP6.04□□□□□ -1.44
ATXN3-236ENST00000556220 EPORP19235 508 aa6.04□□□□□ -1.44
ATXN3-236ENST00000556220 HSPA7P48741 367 aa6.04□□□□□ -1.44
ATXN3-236ENST00000556220 PDLIM4P50479 330 aa6.04□□□□□ -1.44
ATXN3-236ENST00000556220 RAP1GDS1P52306 607 aa6.04□□□□□ -1.44
ATXN3-236ENST00000556220 MGAT2Q10469 447 aa6.04□□□□□ -1.44
ATXN3-236ENST00000556220 CHIT1Q13231 466 aa6.04□□□□□ -1.44
ATXN3-236ENST00000556220 GANABQ14697 944 aaKnown RBP6.04□□□□□ -1.44
ATXN3-236ENST00000556220 FASTKD3Q14CZ7 662 aaKnown RBP6.04□□□□□ -1.44
ATXN3-236ENST00000556220 P2RY6Q15077 328 aa6.04□□□□□ -1.44
ATXN3-236ENST00000556220 TGFBIQ15582 683 aa6.04□□□□□ -1.44
ATXN3-236ENST00000556220 PDK4Q16654 411 aa6.04□□□□□ -1.44
ATXN3-236ENST00000556220 GLYR1Q49A26 553 aaPredicted RBP6.04□□□□□ -1.44
ATXN3-236ENST00000556220 MIDNQ504T8 468 aa6.04□□□□□ -1.44
ATXN3-236ENST00000556220 FBXO48Q5FWF7 155 aa6.04□□□□□ -1.44
ATXN3-236ENST00000556220 C6orf163Q5TEZ5 329 aa6.04□□□□□ -1.44
ATXN3-236ENST00000556220 STEAP3Q658P3 488 aa6.04□□□□□ -1.44
ATXN3-236ENST00000556220 OR52E8Q6IFG1 317 aa6.04□□□□□ -1.44
ATXN3-236ENST00000556220 PPP4R4Q6NUP7 873 aa6.04□□□□□ -1.44
ATXN3-236ENST00000556220 FAM111BQ6SJ93 734 aa6.04□□□□□ -1.44
ATXN3-236ENST00000556220 DEF8Q6ZN54 512 aa6.04□□□□□ -1.44
ATXN3-236ENST00000556220 Q6ZSR9 355 aa6.04□□□□□ -1.44
ATXN3-236ENST00000556220 ADAMTSL2Q86TH1 951 aa6.04□□□□□ -1.44
ATXN3-236ENST00000556220 CCDC25Q86WR0 208 aa6.04□□□□□ -1.44
ATXN3-236ENST00000556220 FBXL14Q8N1E6 418 aa6.04□□□□□ -1.44
ATXN3-236ENST00000556220 RNF175Q8N4F7 328 aa6.04□□□□□ -1.44
ATXN3-236ENST00000556220 LRRC17Q8N6Y2 441 aa6.04□□□□□ -1.44
ATXN3-236ENST00000556220 CEP112Q8N8E3 955 aa6.04□□□□□ -1.44
ATXN3-236ENST00000556220 OR2M3Q8NG83 312 aa6.04□□□□□ -1.44
ATXN3-236ENST00000556220 OR7G3Q8NG95 312 aa6.04□□□□□ -1.44
ATXN3-236ENST00000556220 HUS1BQ8NHY5 278 aa6.04□□□□□ -1.44
ATXN3-236ENST00000556220 KISS1RQ969F8 398 aaPredicted RBP6.04□□□□□ -1.44
ATXN3-236ENST00000556220 ESAMQ96AP7 390 aa6.04□□□□□ -1.44
ATXN3-236ENST00000556220 FOXN4Q96NZ1 517 aa6.04□□□□□ -1.44
ATXN3-236ENST00000556220 PIMREGQ9BSJ6 248 aa6.04□□□□□ -1.44
ATXN3-236ENST00000556220 ZNF717Q9BY31 904 aaPredicted RBP6.04□□□□□ -1.44
ATXN3-236ENST00000556220 POTEKPQ9BYX7 375 aa6.04□□□□□ -1.44
ATXN3-236ENST00000556220 DPH5Q9H2P9 285 aa6.04□□□□□ -1.44
ATXN3-236ENST00000556220 DDX31Q9H8H2 851 aaKnown RBP6.04□□□□□ -1.44
ATXN3-236ENST00000556220 PAQR5Q9NXK6 330 aaPredicted RBP6.04□□□□□ -1.44
ATXN3-236ENST00000556220 MED11Q9P086 117 aa6.04□□□□□ -1.44
ATXN3-236ENST00000556220 CTNNAL1Q9UBT7 734 aa6.04□□□□□ -1.44
ATXN3-236ENST00000556220 PRODH2Q9UF12 536 aa6.04□□□□□ -1.44
ATXN3-236ENST00000556220 ZNF639Q9UID6 485 aa6.04□□□□□ -1.44
ATXN3-236ENST00000556220 MCTS1Q9ULC4 181 aaKnown RBP6.04□□□□□ -1.44
ATXN3-236ENST00000556220 PLLPQ9Y342 182 aa6.04□□□□□ -1.44
ATXN3-236ENST00000556220 VWFP04275 2813 aa6.03□□□□□ -1.44
ATXN3-236ENST00000556220 GOLGA8QA0A0J9YX86 632 aa6.03□□□□□ -1.44
ATXN3-236ENST00000556220 TCRBV5S2A0A599 114 aa6.03□□□□□ -1.44
ATXN3-236ENST00000556220 GOLGA8OA6NCC3 632 aa6.03□□□□□ -1.44
ATXN3-236ENST00000556220 GOLGA8NF8WBI6 632 aa6.03□□□□□ -1.44
ATXN3-236ENST00000556220 GOLGA8RI6L899 631 aa6.03□□□□□ -1.44
ATXN3-236ENST00000556220 SMAD9O15198 467 aaKnown RBP6.03□□□□□ -1.44
ATXN3-236ENST00000556220 TSPAN2O60636 221 aa6.03□□□□□ -1.44
ATXN3-236ENST00000556220 LY6HO94772 140 aa6.03□□□□□ -1.44
ATXN3-236ENST00000556220 ADAP00813 363 aa6.03□□□□□ -1.44
ATXN3-236ENST00000556220 TUBBP07437 444 aa6.03□□□□□ -1.44
ATXN3-236ENST00000556220 ZNF23P17027 643 aa6.03□□□□□ -1.44
ATXN3-236ENST00000556220 PGAM1P18669 254 aa6.03□□□□□ -1.44
ATXN3-236ENST00000556220 PTX3P26022 381 aaPredicted RBP6.03□□□□□ -1.44
ATXN3-236ENST00000556220 AGTR1P30556 359 aa6.03□□□□□ -1.44
ATXN3-236ENST00000556220 BSGP35613 385 aa6.03□□□□□ -1.44
ATXN3-236ENST00000556220 PIK3CBP42338 1070 aa6.03□□□□□ -1.44
ATXN3-236ENST00000556220 VPS41P49754 854 aa6.03□□□□□ -1.44
ATXN3-236ENST00000556220 EMDP50402 254 aa6.03□□□□□ -1.44
ATXN3-236ENST00000556220 FABP6P51161 128 aa6.03□□□□□ -1.44
ATXN3-236ENST00000556220 GUCY2DQ02846 1103 aa6.03□□□□□ -1.44
ATXN3-236ENST00000556220 LGALS3BPQ08380 585 aa6.03□□□□□ -1.44
ATXN3-236ENST00000556220 ITGADQ13349 1161 aa6.03□□□□□ -1.44
ATXN3-236ENST00000556220 CRYMQ14894 314 aa6.03□□□□□ -1.44
ATXN3-236ENST00000556220 EXOSC7Q15024 291 aaKnown RBP6.03□□□□□ -1.44
ATXN3-236ENST00000556220 PRICKLE4Q2TBC4 344 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms