RNA–Protein interactions for RNA: ENST00000556102.6

CDKN3-209, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-209ENST00000556102 ZCCHC3Q9NUD5 404 aaKnown RBP16.82■□□□□ 0.28
CDKN3-209ENST00000556102 GPR52Q9Y2T5 361 aa16.82■□□□□ 0.28
CDKN3-209ENST00000556102 HIVEP2P31629 2446 aa16.82■□□□□ 0.28
CDKN3-209ENST00000556102 ZANQ9Y493 2812 aa16.82■□□□□ 0.28
CDKN3-209ENST00000556102 FREM1Q5H8C1 2179 aa16.81■□□□□ 0.28
CDKN3-209ENST00000556102 SMAD7O15105 426 aaKnown RBP16.81■□□□□ 0.28
CDKN3-209ENST00000556102 HMGN2P05204 90 aaKnown RBP16.81■□□□□ 0.28
CDKN3-209ENST00000556102 FGF4P08620 206 aa16.81■□□□□ 0.28
CDKN3-209ENST00000556102 LINGO3P0C6S8 592 aa16.81■□□□□ 0.28
CDKN3-209ENST00000556102 PSMB1P20618 241 aaKnown RBP16.81■□□□□ 0.28
CDKN3-209ENST00000556102 ELK4P28324 431 aa16.81■□□□□ 0.28
CDKN3-209ENST00000556102 HPCAL1P37235 193 aa16.81■□□□□ 0.28
CDKN3-209ENST00000556102 EIF1P41567 113 aaKnown RBP16.81■□□□□ 0.28
CDKN3-209ENST00000556102 CD226Q15762 336 aa16.81■□□□□ 0.28
CDKN3-209ENST00000556102 WFDC8Q8IUA0 241 aa16.81■□□□□ 0.28
CDKN3-209ENST00000556102 DDIASQ8IXT1 998 aa16.81■□□□□ 0.28
CDKN3-209ENST00000556102 LILRA2Q8N149 483 aa16.81■□□□□ 0.28
CDKN3-209ENST00000556102 TWIST2Q8WVJ9 160 aa16.81■□□□□ 0.28
CDKN3-209ENST00000556102 OSTF1Q92882 214 aa16.81■□□□□ 0.28
CDKN3-209ENST00000556102 PIGUQ9H490 435 aa16.81■□□□□ 0.28
CDKN3-209ENST00000556102 ATP6V1HQ9UI12 483 aa16.81■□□□□ 0.28
CDKN3-209ENST00000556102 TRIM64A6NGJ6 449 aa16.8■□□□□ 0.28
CDKN3-209ENST00000556102 TRIM64BA6NI03 449 aa16.8■□□□□ 0.28
CDKN3-209ENST00000556102 TMEM114B3SHH9 223 aa16.8■□□□□ 0.28
CDKN3-209ENST00000556102 SCAMP2O15127 329 aaKnown RBP16.8■□□□□ 0.28
CDKN3-209ENST00000556102 TMCC2O75069 709 aa16.8■□□□□ 0.28
CDKN3-209ENST00000556102 PABPC4LP0CB38 370 aaKnown RBP16.8■□□□□ 0.28
CDKN3-209ENST00000556102 PAX1P15863 534 aa16.8■□□□□ 0.28
CDKN3-209ENST00000556102 RPL3P39023 403 aaKnown RBP16.8■□□□□ 0.28
CDKN3-209ENST00000556102 CARD18P57730 90 aa16.8■□□□□ 0.28
CDKN3-209ENST00000556102 LASP1Q14847 261 aaKnown RBP16.8■□□□□ 0.28
CDKN3-209ENST00000556102 ZNF239Q16600 458 aaKnown RBP16.8■□□□□ 0.28
CDKN3-209ENST00000556102 MTERF4Q7Z6M4 381 aaKnown RBP16.8■□□□□ 0.28
CDKN3-209ENST00000556102 PHOSPHO1Q8TCT1 267 aa16.8■□□□□ 0.28
CDKN3-209ENST00000556102 NUDT8Q8WV74 236 aa16.8■□□□□ 0.28
CDKN3-209ENST00000556102 TMEM171Q8WVE6 324 aa16.8■□□□□ 0.28
CDKN3-209ENST00000556102 CDS1Q92903 461 aa16.8■□□□□ 0.28
CDKN3-209ENST00000556102 CHMP6Q96FZ7 201 aa16.8■□□□□ 0.28
CDKN3-209ENST00000556102 PLPPR2Q96GM1 343 aa16.8■□□□□ 0.28
CDKN3-209ENST00000556102 C12orf49Q9H741 205 aa16.8■□□□□ 0.28
CDKN3-209ENST00000556102 MKS1Q9NXB0 559 aa16.8■□□□□ 0.28
CDKN3-209ENST00000556102 GIN1Q9NXP7 522 aa16.8■□□□□ 0.28
CDKN3-209ENST00000556102 TRAF6Q9Y4K3 522 aa16.8■□□□□ 0.28
CDKN3-209ENST00000556102 TMEM233B4DJY2 109 aa16.79■□□□□ 0.28
CDKN3-209ENST00000556102 PIP5K1BO14986 540 aa16.79■□□□□ 0.28
CDKN3-209ENST00000556102 NPHS1O60500 1241 aa16.79■□□□□ 0.28
CDKN3-209ENST00000556102 PLAUP00749 431 aa16.79■□□□□ 0.28
CDKN3-209ENST00000556102 CHRNGP07510 517 aa16.79■□□□□ 0.28
CDKN3-209ENST00000556102 NID1P14543 1247 aa16.79■□□□□ 0.28
CDKN3-209ENST00000556102 ATP6V1C1P21283 382 aa16.79■□□□□ 0.28
CDKN3-209ENST00000556102 ADH6P28332 368 aa16.79■□□□□ 0.28
CDKN3-209ENST00000556102 MAPK1P28482 360 aa16.79■□□□□ 0.28
CDKN3-209ENST00000556102 SHC1P29353 583 aa16.79■□□□□ 0.28
CDKN3-209ENST00000556102 SFTPDP35247 375 aa16.79■□□□□ 0.28
CDKN3-209ENST00000556102 ZNF117Q03924 483 aa16.79■□□□□ 0.28
CDKN3-209ENST00000556102 FOXF1Q12946 379 aa16.79■□□□□ 0.28
CDKN3-209ENST00000556102 UGT3A2Q3SY77 523 aa16.79■□□□□ 0.28
CDKN3-209ENST00000556102 CDC73Q6P1J9 531 aa16.79■□□□□ 0.28
CDKN3-209ENST00000556102 ZNF527Q8NB42 609 aa16.79■□□□□ 0.28
CDKN3-209ENST00000556102 OR7A2PQ8NGA2 310 aa16.79■□□□□ 0.28
CDKN3-209ENST00000556102 RNF128Q8TEB7 428 aa16.79■□□□□ 0.28
CDKN3-209ENST00000556102 ROBO4Q8WZ75 1007 aa16.79■□□□□ 0.28
CDKN3-209ENST00000556102 CPNE4Q96A23 557 aaPredicted RBP16.79■□□□□ 0.28
CDKN3-209ENST00000556102 REXO5Q96IC2 774 aaKnown RBP16.79■□□□□ 0.28
CDKN3-209ENST00000556102 PPP3R2Q96LZ3 170 aa16.79■□□□□ 0.28
CDKN3-209ENST00000556102 TMEM204Q9BSN7 226 aa16.79■□□□□ 0.28
CDKN3-209ENST00000556102 HOXD1Q9GZZ0 328 aa16.79■□□□□ 0.28
CDKN3-209ENST00000556102 CXorf56Q9H5V9 222 aa16.79■□□□□ 0.28
CDKN3-209ENST00000556102 TIGARQ9NQ88 270 aa16.79■□□□□ 0.28
CDKN3-209ENST00000556102 ZNF701Q9NV72 531 aaPredicted RBP16.79■□□□□ 0.28
CDKN3-209ENST00000556102 SNX8Q9Y5X2 465 aa16.79■□□□□ 0.28
CDKN3-209ENST00000556102 HS3ST1O14792 307 aa16.78■□□□□ 0.28
CDKN3-209ENST00000556102 CNOT4O95628 575 aaKnown RBP16.78■□□□□ 0.28
CDKN3-209ENST00000556102 P2RX1P51575 399 aa16.78■□□□□ 0.28
CDKN3-209ENST00000556102 SUMO3P55854 103 aaPredicted RBP16.78■□□□□ 0.28
CDKN3-209ENST00000556102 ZNF844Q08AG5 666 aa16.78■□□□□ 0.28
CDKN3-209ENST00000556102 RNPS1Q15287 305 aaKnown RBP16.78■□□□□ 0.28
CDKN3-209ENST00000556102 ARL13AQ5H913 290 aaPredicted RBP16.78■□□□□ 0.28
CDKN3-209ENST00000556102 TMEM201Q5SNT2 666 aa16.78■□□□□ 0.28
CDKN3-209ENST00000556102 ZNF611Q8N823 705 aa16.78■□□□□ 0.28
CDKN3-209ENST00000556102 LRRN4CLQ8ND94 238 aa16.78■□□□□ 0.28
CDKN3-209ENST00000556102 STEAP2Q8NFT2 490 aa16.78■□□□□ 0.28
CDKN3-209ENST00000556102 OR56A1Q8NGH5 318 aa16.78■□□□□ 0.28
CDKN3-209ENST00000556102 PSMA8Q8TAA3 256 aa16.78■□□□□ 0.28
CDKN3-209ENST00000556102 ABHD3Q8WU67 409 aa16.78■□□□□ 0.28
CDKN3-209ENST00000556102 OR5P2Q8WZ92 322 aa16.78■□□□□ 0.28
CDKN3-209ENST00000556102 APOPT1Q96IL0 206 aa16.78■□□□□ 0.28
CDKN3-209ENST00000556102 ACTRT3Q9BYD9 372 aa16.78■□□□□ 0.28
CDKN3-209ENST00000556102 EML4Q9HC35 981 aaKnown RBP16.78■□□□□ 0.28
CDKN3-209ENST00000556102 GIMAP2Q9UG22 337 aa16.78■□□□□ 0.28
CDKN3-209ENST00000556102 ACTL7BQ9Y614 415 aa16.78■□□□□ 0.28
CDKN3-209ENST00000556102 NPIPA5A0A0B4J1W7 369 aa16.77■□□□□ 0.28
CDKN3-209ENST00000556102 GJE1A6NN92 205 aa16.77■□□□□ 0.28
CDKN3-209ENST00000556102 NPIPA7E9PJI5 369 aa16.77■□□□□ 0.28
CDKN3-209ENST00000556102 H3BNH8 94 aa16.77■□□□□ 0.28
CDKN3-209ENST00000556102 OIP5O43482 229 aa16.77■□□□□ 0.28
CDKN3-209ENST00000556102 EFNA2O43921 213 aa16.77■□□□□ 0.28
CDKN3-209ENST00000556102 SOX30O94993 753 aa16.77■□□□□ 0.28
CDKN3-209ENST00000556102 NUDT14O95848 222 aa16.77■□□□□ 0.28
CDKN3-209ENST00000556102 KRT16P08779 473 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms