RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 CXCR6O00574 342 aa6.96□□□□□ -1.3
TDP1-214ENST00000556063 DNAJC8O75937 253 aaPredicted RBP6.96□□□□□ -1.3
TDP1-214ENST00000556063 GLSO94925 669 aaPredicted RBP6.96□□□□□ -1.3
TDP1-214ENST00000556063 MFN2O95140 757 aa6.96□□□□□ -1.3
TDP1-214ENST00000556063 ZIC2O95409 532 aaPredicted RBP6.96□□□□□ -1.3
TDP1-214ENST00000556063 C8BP07358 591 aa6.96□□□□□ -1.3
TDP1-214ENST00000556063 LINGO3P0C6S8 592 aa6.96□□□□□ -1.3
TDP1-214ENST00000556063 PABPC4LP0CB38 370 aaKnown RBP6.96□□□□□ -1.3
TDP1-214ENST00000556063 UBTFL6P0CB48 400 aaPredicted RBP6.96□□□□□ -1.3
TDP1-214ENST00000556063 PGCP20142 388 aa6.96□□□□□ -1.3
TDP1-214ENST00000556063 RPS4Y1P22090 263 aaKnown RBP6.96□□□□□ -1.3
TDP1-214ENST00000556063 ME2P23368 584 aa6.96□□□□□ -1.3
TDP1-214ENST00000556063 DPP4P27487 766 aa6.96□□□□□ -1.3
TDP1-214ENST00000556063 SRD5A2P31213 254 aa6.96□□□□□ -1.3
TDP1-214ENST00000556063 KDELR2P33947 212 aa6.96□□□□□ -1.3
TDP1-214ENST00000556063 P2RX1P51575 399 aa6.96□□□□□ -1.3
TDP1-214ENST00000556063 CCR4P51679 360 aa6.96□□□□□ -1.3
TDP1-214ENST00000556063 ZNF41P51814 821 aaPredicted RBP6.96□□□□□ -1.3
TDP1-214ENST00000556063 DSCR4P56555 118 aaPredicted RBP6.96□□□□□ -1.3
TDP1-214ENST00000556063 PCBP3P57721 371 aaKnown RBP6.96□□□□□ -1.3
TDP1-214ENST00000556063 COPZ1P61923 177 aa6.96□□□□□ -1.3
TDP1-214ENST00000556063 INPP5JQ15735 1006 aaPredicted RBP6.96□□□□□ -1.3
TDP1-214ENST00000556063 MAPK11Q15759 364 aa6.96□□□□□ -1.3
TDP1-214ENST00000556063 CD226Q15762 336 aa6.96□□□□□ -1.3
TDP1-214ENST00000556063 MAPK14Q16539 360 aa6.96□□□□□ -1.3
TDP1-214ENST00000556063 MRPL2Q5T653 305 aaKnown RBP6.96□□□□□ -1.3
TDP1-214ENST00000556063 FNDC7Q5VTL7 733 aa6.96□□□□□ -1.3
TDP1-214ENST00000556063 OR5M10Q6IEU7 315 aa6.96□□□□□ -1.3
TDP1-214ENST00000556063 DHRS4L2Q6PKH6 230 aa6.96□□□□□ -1.3
TDP1-214ENST00000556063 APOOLQ6UXV4 268 aa6.96□□□□□ -1.3
TDP1-214ENST00000556063 OLIG3Q7RTU3 272 aa6.96□□□□□ -1.3
TDP1-214ENST00000556063 TMEM251Q8N6I4 163 aa6.96□□□□□ -1.3
TDP1-214ENST00000556063 RNF148Q8N7C7 305 aa6.96□□□□□ -1.3
TDP1-214ENST00000556063 FADS6Q8N9I5 356 aa6.96□□□□□ -1.3
TDP1-214ENST00000556063 WDSUB1Q8N9V3 476 aa6.96□□□□□ -1.3
TDP1-214ENST00000556063 Q8NA96 180 aa6.96□□□□□ -1.3
TDP1-214ENST00000556063 OR2M3Q8NG83 312 aa6.96□□□□□ -1.3
TDP1-214ENST00000556063 OR5W2Q8NH69 310 aa6.96□□□□□ -1.3
TDP1-214ENST00000556063 FBXO27Q8NI29 283 aa6.96□□□□□ -1.3
TDP1-214ENST00000556063 FAR1Q8WVX9 515 aa6.96□□□□□ -1.3
TDP1-214ENST00000556063 TMEM234Q8WY98 164 aa6.96□□□□□ -1.3
TDP1-214ENST00000556063 FIG4Q92562 907 aa6.96□□□□□ -1.3
TDP1-214ENST00000556063 NR4A3Q92570 626 aa6.96□□□□□ -1.3
TDP1-214ENST00000556063 PROX1Q92786 737 aa6.96□□□□□ -1.3
TDP1-214ENST00000556063 FAM162AQ96A26 154 aa6.96□□□□□ -1.3
TDP1-214ENST00000556063 NTNG2Q96CW9 530 aa6.96□□□□□ -1.3
TDP1-214ENST00000556063 ZG16BQ96DA0 208 aa6.96□□□□□ -1.3
TDP1-214ENST00000556063 SH3YL1Q96HL8 342 aaPredicted RBP6.96□□□□□ -1.3
TDP1-214ENST00000556063 GNRHR2Q96P88 292 aa6.96□□□□□ -1.3
TDP1-214ENST00000556063 THTPAQ9BU02 230 aa6.96□□□□□ -1.3
TDP1-214ENST00000556063 PINK1Q9BXM7 581 aa6.96□□□□□ -1.3
TDP1-214ENST00000556063 QRSL1Q9H0R6 528 aaKnown RBP6.96□□□□□ -1.3
TDP1-214ENST00000556063 MMADHCQ9H3L0 296 aaPredicted RBP6.96□□□□□ -1.3
TDP1-214ENST00000556063 LDAHQ9H6V9 325 aa6.96□□□□□ -1.3
TDP1-214ENST00000556063 EXO5Q9H790 373 aa6.96□□□□□ -1.3
TDP1-214ENST00000556063 ACKR4Q9NPB9 350 aa6.96□□□□□ -1.3
TDP1-214ENST00000556063 EXOSC3Q9NQT5 275 aaKnown RBP6.96□□□□□ -1.3
TDP1-214ENST00000556063 MED11Q9P086 117 aa6.96□□□□□ -1.3
TDP1-214ENST00000556063 STOML1Q9UBI4 398 aa6.96□□□□□ -1.3
TDP1-214ENST00000556063 MAGEL2Q9UJ55 1249 aa6.96□□□□□ -1.3
TDP1-214ENST00000556063 KCNE5Q9UJ90 142 aa6.96□□□□□ -1.3
TDP1-214ENST00000556063 RPS6KA6Q9UK32 745 aa6.96□□□□□ -1.3
TDP1-214ENST00000556063 DKKL1Q9UK85 242 aa6.96□□□□□ -1.3
TDP1-214ENST00000556063 SLC9A8Q9Y2E8 581 aa6.96□□□□□ -1.3
TDP1-214ENST00000556063 CARD8Q9Y2G2 431 aa6.96□□□□□ -1.3
TDP1-214ENST00000556063 MRPS18CQ9Y3D5 142 aaKnown RBP6.96□□□□□ -1.3
TDP1-214ENST00000556063 PCNX3Q9H6A9 2034 aa6.96□□□□□ -1.3
TDP1-214ENST00000556063 TRGV5A0A0B4J1U4 118 aa6.95□□□□□ -1.3
TDP1-214ENST00000556063 CDHR4A6H8M9 788 aa6.95□□□□□ -1.3
TDP1-214ENST00000556063 ANKUB1A6NFN9 424 aa6.95□□□□□ -1.3
TDP1-214ENST00000556063 CFAP73A6NFT4 308 aa6.95□□□□□ -1.3
TDP1-214ENST00000556063 LRRC3CA6NJW4 275 aa6.95□□□□□ -1.3
TDP1-214ENST00000556063 B8ZZF3 427 aa6.95□□□□□ -1.3
TDP1-214ENST00000556063 NPIPA5E9PKD4 350 aa6.95□□□□□ -1.3
TDP1-214ENST00000556063 LINC01387J3KSC0 135 aa6.95□□□□□ -1.3
TDP1-214ENST00000556063 SUV39H1O43463 412 aa6.95□□□□□ -1.3
TDP1-214ENST00000556063 HCN1O60741 890 aa6.95□□□□□ -1.3
TDP1-214ENST00000556063 HK1P19367 917 aa6.95□□□□□ -1.3
TDP1-214ENST00000556063 GGT1P19440 569 aa6.95□□□□□ -1.3
TDP1-214ENST00000556063 TCN1P20061 433 aaPredicted RBP6.95□□□□□ -1.3
TDP1-214ENST00000556063 PGM1P36871 562 aa6.95□□□□□ -1.3
TDP1-214ENST00000556063 RFC3P40938 356 aa6.95□□□□□ -1.3
TDP1-214ENST00000556063 EIF1P41567 113 aaKnown RBP6.95□□□□□ -1.3
TDP1-214ENST00000556063 NCALDP61601 193 aa6.95□□□□□ -1.3
TDP1-214ENST00000556063 EEF1A1P68104 462 aaKnown RBP6.95□□□□□ -1.3
TDP1-214ENST00000556063 PMP22Q01453 160 aa6.95□□□□□ -1.3
TDP1-214ENST00000556063 ZNF117Q03924 483 aa6.95□□□□□ -1.3
TDP1-214ENST00000556063 RBPJQ06330 500 aa6.95□□□□□ -1.3
TDP1-214ENST00000556063 SKP2Q13309 424 aa6.95□□□□□ -1.3
TDP1-214ENST00000556063 CBFBQ13951 182 aa6.95□□□□□ -1.3
TDP1-214ENST00000556063 GLYR1Q49A26 553 aaPredicted RBP6.95□□□□□ -1.3
TDP1-214ENST00000556063 LRRC23Q53EV4 343 aaPredicted RBP6.95□□□□□ -1.3
TDP1-214ENST00000556063 GLYATQ6IB77 296 aa6.95□□□□□ -1.3
TDP1-214ENST00000556063 AAGABQ6PD74 315 aa6.95□□□□□ -1.3
TDP1-214ENST00000556063 ZNF836Q6ZNA1 936 aa6.95□□□□□ -1.3
TDP1-214ENST00000556063 HMGN2P46Q86SG4 172 aa6.95□□□□□ -1.3
TDP1-214ENST00000556063 VRK2Q86Y07 508 aa6.95□□□□□ -1.3
TDP1-214ENST00000556063 GRAMD2AQ8IUY3 354 aa6.95□□□□□ -1.3
TDP1-214ENST00000556063 EID3Q8N140 333 aa6.95□□□□□ -1.3
TDP1-214ENST00000556063 GHDCQ8N2G8 530 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms