RNA–Protein interactions for RNA: ENST00000555563.5

SHMT2-219, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-219ENST00000555563 H0YC42 278 aa12.38□□□□□ -0.43
SHMT2-219ENST00000555563 LINC01387J3KSC0 135 aa12.38□□□□□ -0.43
SHMT2-219ENST00000555563 UGT2B17O75795 530 aa12.38□□□□□ -0.43
SHMT2-219ENST00000555563 IL2RAP01589 272 aa12.38□□□□□ -0.43
SHMT2-219ENST00000555563 UBL4AP11441 157 aa12.38□□□□□ -0.43
SHMT2-219ENST00000555563 PEPDP12955 493 aa12.38□□□□□ -0.43
SHMT2-219ENST00000555563 PRF1P14222 555 aa12.38□□□□□ -0.43
SHMT2-219ENST00000555563 COX6B1P14854 86 aa12.38□□□□□ -0.43
SHMT2-219ENST00000555563 BMP5P22003 454 aa12.38□□□□□ -0.43
SHMT2-219ENST00000555563 ZNF136P52737 540 aa12.38□□□□□ -0.43
SHMT2-219ENST00000555563 SUCLG1P53597 346 aaKnown RBP12.38□□□□□ -0.43
SHMT2-219ENST00000555563 TPD52P55327 224 aaPredicted RBP12.38□□□□□ -0.43
SHMT2-219ENST00000555563 SUMO3P55854 103 aaPredicted RBP12.38□□□□□ -0.43
SHMT2-219ENST00000555563 CLDN15P56746 228 aa12.38□□□□□ -0.43
SHMT2-219ENST00000555563 CLDN20P56880 219 aa12.38□□□□□ -0.43
SHMT2-219ENST00000555563 ZNF141Q15928 474 aa12.38□□□□□ -0.43
SHMT2-219ENST00000555563 SLC25A35Q3KQZ1 300 aa12.38□□□□□ -0.43
SHMT2-219ENST00000555563 COX20Q5RI15 118 aa12.38□□□□□ -0.43
SHMT2-219ENST00000555563 C6orf10Q5SRN2 563 aa12.38□□□□□ -0.43
SHMT2-219ENST00000555563 TYW3Q6IPR3 259 aaKnown RBP12.38□□□□□ -0.43
SHMT2-219ENST00000555563 FRRS1Q6ZNA5 592 aa12.38□□□□□ -0.43
SHMT2-219ENST00000555563 GTPBP8Q8N3Z3 284 aaPredicted RBP12.38□□□□□ -0.43
SHMT2-219ENST00000555563 MEIOBQ8N635 442 aa12.38□□□□□ -0.43
SHMT2-219ENST00000555563 ACBD4Q8NC06 268 aa12.38□□□□□ -0.43
SHMT2-219ENST00000555563 ZFP90Q8TF47 636 aa12.38□□□□□ -0.43
SHMT2-219ENST00000555563 ZBTB8AQ96BR9 441 aa12.38□□□□□ -0.43
SHMT2-219ENST00000555563 ITCHQ96J02 903 aa12.38□□□□□ -0.43
SHMT2-219ENST00000555563 RNF145Q96MT1 663 aa12.38□□□□□ -0.43
SHMT2-219ENST00000555563 UCN2Q96RP3 112 aa12.38□□□□□ -0.43
SHMT2-219ENST00000555563 NPHS2Q9NP85 383 aa12.38□□□□□ -0.43
SHMT2-219ENST00000555563 POLE3Q9NRF9 147 aa12.38□□□□□ -0.43
SHMT2-219ENST00000555563 ICAM5Q9UMF0 924 aa12.38□□□□□ -0.43
SHMT2-219ENST00000555563 HCFC1P51610 2035 aa12.38□□□□□ -0.43
SHMT2-219ENST00000555563 UNC79Q9P2D8 2635 aa12.38□□□□□ -0.43
SHMT2-219ENST00000555563 DOCK7Q96N67 2140 aa12.37□□□□□ -0.43
SHMT2-219ENST00000555563 CREBBPQ92793 2442 aa12.37□□□□□ -0.43
SHMT2-219ENST00000555563 MYO9AB2RTY4 2548 aa12.37□□□□□ -0.43
SHMT2-219ENST00000555563 SERINC4A6NH21 518 aa12.37□□□□□ -0.43
SHMT2-219ENST00000555563 NR5A2O00482 541 aa12.37□□□□□ -0.43
SHMT2-219ENST00000555563 DVL2O14641 736 aa12.37□□□□□ -0.43
SHMT2-219ENST00000555563 H6PDO95479 791 aa12.37□□□□□ -0.43
SHMT2-219ENST00000555563 KRT75O95678 551 aa12.37□□□□□ -0.43
SHMT2-219ENST00000555563 GUSBP08236 651 aa12.37□□□□□ -0.43
SHMT2-219ENST00000555563 LINGO3P0C6S8 592 aa12.37□□□□□ -0.43
SHMT2-219ENST00000555563 ZCCHC18P0CG32 403 aa12.37□□□□□ -0.43
SHMT2-219ENST00000555563 IGFBP2P18065 325 aa12.37□□□□□ -0.43
SHMT2-219ENST00000555563 PSMA4P25789 261 aaKnown RBP12.37□□□□□ -0.43
SHMT2-219ENST00000555563 ANXA11P50995 505 aaKnown RBP12.37□□□□□ -0.43
SHMT2-219ENST00000555563 P2RX1P51575 399 aa12.37□□□□□ -0.43
SHMT2-219ENST00000555563 MVDP53602 400 aa12.37□□□□□ -0.43
SHMT2-219ENST00000555563 TXNL4AP83876 142 aaKnown RBP12.37□□□□□ -0.43
SHMT2-219ENST00000555563 HPCAP84074 193 aa12.37□□□□□ -0.43
SHMT2-219ENST00000555563 FOXF1Q12946 379 aa12.37□□□□□ -0.43
SHMT2-219ENST00000555563 MAPK14Q16539 360 aa12.37□□□□□ -0.43
SHMT2-219ENST00000555563 GPAT3Q53EU6 434 aa12.37□□□□□ -0.43
SHMT2-219ENST00000555563 POMZP3Q6PJE2 187 aa12.37□□□□□ -0.43
SHMT2-219ENST00000555563 SLC2A7Q6PXP3 512 aa12.37□□□□□ -0.43
SHMT2-219ENST00000555563 HMGN2P46Q86SG4 172 aa12.37□□□□□ -0.43
SHMT2-219ENST00000555563 GGNQ86UU5 652 aa12.37□□□□□ -0.43
SHMT2-219ENST00000555563 GRAMD2AQ8IUY3 354 aa12.37□□□□□ -0.43
SHMT2-219ENST00000555563 FUNDC1Q8IVP5 155 aa12.37□□□□□ -0.43
SHMT2-219ENST00000555563 TMCO5AQ8N6Q1 288 aa12.37□□□□□ -0.43
SHMT2-219ENST00000555563 ANKFN1Q8N957 763 aa12.37□□□□□ -0.43
SHMT2-219ENST00000555563 RFWD2Q8NHY2 731 aa12.37□□□□□ -0.43
SHMT2-219ENST00000555563 POC1BQ8TC44 478 aa12.37□□□□□ -0.43
SHMT2-219ENST00000555563 STON2Q8WXE9 905 aa12.37□□□□□ -0.43
SHMT2-219ENST00000555563 WNT2BQ93097 391 aa12.37□□□□□ -0.43
SHMT2-219ENST00000555563 AURKBQ96GD4 344 aaPredicted RBP12.37□□□□□ -0.43
SHMT2-219ENST00000555563 ENKD1Q9H0I2 346 aa12.37□□□□□ -0.43
SHMT2-219ENST00000555563 QRSL1Q9H0R6 528 aaKnown RBP12.37□□□□□ -0.43
SHMT2-219ENST00000555563 DCTN4Q9UJW0 460 aa12.37□□□□□ -0.43
SHMT2-219ENST00000555563 L3MBTL1Q9Y468 752 aa12.37□□□□□ -0.43
SHMT2-219ENST00000555563 AP4B1Q9Y6B7 739 aa12.37□□□□□ -0.43
SHMT2-219ENST00000555563 GTPBP1O00178 669 aaKnown RBP12.36□□□□□ -0.43
SHMT2-219ENST00000555563 ZNF264O43296 627 aa12.36□□□□□ -0.43
SHMT2-219ENST00000555563 ANP32DO95626 131 aa12.36□□□□□ -0.43
SHMT2-219ENST00000555563 NUDT14O95848 222 aa12.36□□□□□ -0.43
SHMT2-219ENST00000555563 TGM6O95932 706 aa12.36□□□□□ -0.43
SHMT2-219ENST00000555563 CHRM4P08173 479 aa12.36□□□□□ -0.43
SHMT2-219ENST00000555563 TMIGD3P0DMS9 266 aaPredicted RBP12.36□□□□□ -0.43
SHMT2-219ENST00000555563 CAPN3P20807 821 aa12.36□□□□□ -0.43
SHMT2-219ENST00000555563 ATP4BP51164 291 aa12.36□□□□□ -0.43
SHMT2-219ENST00000555563 CCR4P51679 360 aa12.36□□□□□ -0.43
SHMT2-219ENST00000555563 AGFG1P52594 562 aaKnown RBP12.36□□□□□ -0.43
SHMT2-219ENST00000555563 CHRNEQ04844 493 aa12.36□□□□□ -0.43
SHMT2-219ENST00000555563 FOXF2Q12947 444 aa12.36□□□□□ -0.43
SHMT2-219ENST00000555563 SKP2Q13309 424 aa12.36□□□□□ -0.43
SHMT2-219ENST00000555563 SQLEQ14534 574 aa12.36□□□□□ -0.43
SHMT2-219ENST00000555563 SYPL1Q16563 259 aa12.36□□□□□ -0.43
SHMT2-219ENST00000555563 BLOC1S3Q6QNY0 202 aa12.36□□□□□ -0.43
SHMT2-219ENST00000555563 MEX3BQ6ZN04 569 aaKnown RBP12.36□□□□□ -0.43
SHMT2-219ENST00000555563 CHMP1BQ7LBR1 199 aa12.36□□□□□ -0.43
SHMT2-219ENST00000555563 MCEMP1Q8IX19 187 aa12.36□□□□□ -0.43
SHMT2-219ENST00000555563 GCNT2Q8N0V5 402 aa12.36□□□□□ -0.43
SHMT2-219ENST00000555563 ZNF619Q8N2I2 560 aa12.36□□□□□ -0.43
SHMT2-219ENST00000555563 METTL25Q8N6Q8 603 aa12.36□□□□□ -0.43
SHMT2-219ENST00000555563 GTF2H4Q92759 462 aa12.36□□□□□ -0.43
SHMT2-219ENST00000555563 ARSGQ96EG1 525 aa12.36□□□□□ -0.43
SHMT2-219ENST00000555563 ZNF845Q96IR2 970 aaPredicted RBP12.36□□□□□ -0.43
SHMT2-219ENST00000555563 TRNT1Q96Q11 434 aaKnown RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms