RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 DNASE1P24855 282 aa15.88■□□□□ 0.13
PPP4R3A-208ENST00000555462 HTRA3P83110 453 aa15.88■□□□□ 0.13
PPP4R3A-208ENST00000555462 ZNF33BQ06732 778 aa15.88■□□□□ 0.13
PPP4R3A-208ENST00000555462 ST3GAL3Q11203 375 aa15.88■□□□□ 0.13
PPP4R3A-208ENST00000555462 LINGO2Q7L985 606 aa15.88■□□□□ 0.13
PPP4R3A-208ENST00000555462 GLRX5Q86SX6 157 aa15.88■□□□□ 0.13
PPP4R3A-208ENST00000555462 OR2T33Q8NG76 320 aa15.88■□□□□ 0.13
PPP4R3A-208ENST00000555462 OR2L2Q8NH16 312 aa15.88■□□□□ 0.13
PPP4R3A-208ENST00000555462 THAP4Q8WY91 577 aa15.88■□□□□ 0.13
PPP4R3A-208ENST00000555462 GHSRQ92847 366 aa15.88■□□□□ 0.13
PPP4R3A-208ENST00000555462 METTL2AQ96IZ6 378 aaKnown RBP15.88■□□□□ 0.13
PPP4R3A-208ENST00000555462 PTCHD1Q96NR3 888 aa15.88■□□□□ 0.13
PPP4R3A-208ENST00000555462 ZFP64Q9NPA5 681 aa15.88■□□□□ 0.13
PPP4R3A-208ENST00000555462 STK25O00506 426 aa15.88■□□□□ 0.13
PPP4R3A-208ENST00000555462 GMDSO60547 372 aa15.88■□□□□ 0.13
PPP4R3A-208ENST00000555462 SLC43A1O75387 559 aa15.88■□□□□ 0.13
PPP4R3A-208ENST00000555462 PPP1R3DO95685 299 aa15.88■□□□□ 0.13
PPP4R3A-208ENST00000555462 PDGFAP04085 211 aa15.88■□□□□ 0.13
PPP4R3A-208ENST00000555462 TRMT12Q53H54 448 aaKnown RBP15.88■□□□□ 0.13
PPP4R3A-208ENST00000555462 TMEM255AQ5JRV8 349 aa15.88■□□□□ 0.13
PPP4R3A-208ENST00000555462 ZBTB37Q5TC79 503 aa15.88■□□□□ 0.13
PPP4R3A-208ENST00000555462 PRPF38BQ5VTL8 546 aaKnown RBP15.88■□□□□ 0.13
PPP4R3A-208ENST00000555462 TEX261Q6UWH6 196 aa15.88■□□□□ 0.13
PPP4R3A-208ENST00000555462 FTMTQ8N4E7 242 aa15.88■□□□□ 0.13
PPP4R3A-208ENST00000555462 BOLLQ8N9W6 283 aaKnown RBP15.88■□□□□ 0.13
PPP4R3A-208ENST00000555462 DUSP18Q8NEJ0 188 aa15.88■□□□□ 0.13
PPP4R3A-208ENST00000555462 MED30Q96HR3 178 aa15.88■□□□□ 0.13
PPP4R3A-208ENST00000555462 BABAM2Q9NXR7 383 aa15.88■□□□□ 0.13
PPP4R3A-208ENST00000555462 ACAD8Q9UKU7 415 aa15.88■□□□□ 0.13
PPP4R3A-208ENST00000555462 U3KQ87 197 aa15.88■□□□□ 0.13
PPP4R3A-208ENST00000555462 CDHR4A6H8M9 788 aa15.87■□□□□ 0.13
PPP4R3A-208ENST00000555462 ARRDC5A6NEK1 342 aa15.87■□□□□ 0.13
PPP4R3A-208ENST00000555462 MAN2B1O00754 1011 aa15.87■□□□□ 0.13
PPP4R3A-208ENST00000555462 PAPLNO95428 1278 aa15.87■□□□□ 0.13
PPP4R3A-208ENST00000555462 MPC2O95563 127 aa15.87■□□□□ 0.13
PPP4R3A-208ENST00000555462 SLC6A1P30531 599 aa15.87■□□□□ 0.13
PPP4R3A-208ENST00000555462 RPS27P42677 84 aaKnown RBP15.87■□□□□ 0.13
PPP4R3A-208ENST00000555462 PER3P56645 1201 aa15.87■□□□□ 0.13
PPP4R3A-208ENST00000555462 EXOSC2Q13868 293 aaKnown RBP15.87■□□□□ 0.13
PPP4R3A-208ENST00000555462 KCNAB1Q14722 419 aa15.87■□□□□ 0.13
PPP4R3A-208ENST00000555462 IKBIPQ70UQ0 350 aa15.87■□□□□ 0.13
PPP4R3A-208ENST00000555462 OR4K13Q8NH42 304 aa15.87■□□□□ 0.13
PPP4R3A-208ENST00000555462 CXorf40AQ8TE69 158 aa15.87■□□□□ 0.13
PPP4R3A-208ENST00000555462 HYLS1Q96M11 299 aa15.87■□□□□ 0.13
PPP4R3A-208ENST00000555462 COQ10AQ96MF6 247 aa15.87■□□□□ 0.13
PPP4R3A-208ENST00000555462 DDOQ99489 341 aa15.87■□□□□ 0.13
PPP4R3A-208ENST00000555462 BTBD1Q9H0C5 482 aa15.87■□□□□ 0.13
PPP4R3A-208ENST00000555462 RNF208Q9H0X6 261 aa15.87■□□□□ 0.13
PPP4R3A-208ENST00000555462 SLCO1C1Q9NYB5 712 aa15.87■□□□□ 0.13
PPP4R3A-208ENST00000555462 CA5BQ9Y2D0 317 aa15.87■□□□□ 0.13
PPP4R3A-208ENST00000555462 A0A1W2PPV9 198 aa15.87■□□□□ 0.13
PPP4R3A-208ENST00000555462 ACOD1A6NK06 481 aa15.87■□□□□ 0.13
PPP4R3A-208ENST00000555462 RPP14O95059 124 aaKnown RBP15.87■□□□□ 0.13
PPP4R3A-208ENST00000555462 CLTBP09497 229 aa15.87■□□□□ 0.13
PPP4R3A-208ENST00000555462 NDUFV2P19404 249 aa15.87■□□□□ 0.13
PPP4R3A-208ENST00000555462 ACSL1P33121 698 aa15.87■□□□□ 0.13
PPP4R3A-208ENST00000555462 BTCP35070 178 aa15.87■□□□□ 0.13
PPP4R3A-208ENST00000555462 CRMP1Q14194 572 aa15.87■□□□□ 0.13
PPP4R3A-208ENST00000555462 ELOAQ14241 798 aaKnown RBP15.87■□□□□ 0.13
PPP4R3A-208ENST00000555462 ACSM3Q53FZ2 586 aa15.87■□□□□ 0.13
PPP4R3A-208ENST00000555462 SLC25A25Q6KCM7 469 aa15.87■□□□□ 0.13
PPP4R3A-208ENST00000555462 KIAA0907Q7Z7F0 614 aaPredicted RBP15.87■□□□□ 0.13
PPP4R3A-208ENST00000555462 LUZP2Q86TE4 346 aa15.87■□□□□ 0.13
PPP4R3A-208ENST00000555462 OR7G2Q8NG99 324 aa15.87■□□□□ 0.13
PPP4R3A-208ENST00000555462 FANK1Q8TC84 345 aa15.87■□□□□ 0.13
PPP4R3A-208ENST00000555462 DIO2Q92813 273 aa15.87■□□□□ 0.13
PPP4R3A-208ENST00000555462 RFKQ969G6 155 aa15.87■□□□□ 0.13
PPP4R3A-208ENST00000555462 OTUB2Q96DC9 234 aa15.87■□□□□ 0.13
PPP4R3A-208ENST00000555462 PPP1R16AQ96I34 528 aa15.87■□□□□ 0.13
PPP4R3A-208ENST00000555462 FGF20Q9NP95 211 aaPredicted RBP15.87■□□□□ 0.13
PPP4R3A-208ENST00000555462 NDOR1Q9UHB4 597 aa15.87■□□□□ 0.13
PPP4R3A-208ENST00000555462 WDR45Q9Y484 360 aa15.87■□□□□ 0.13
PPP4R3A-208ENST00000555462 KIAA1671Q9BY89 1806 aa15.87■□□□□ 0.13
PPP4R3A-208ENST00000555462 RGS9O75916 674 aaPredicted RBP15.87■□□□□ 0.13
PPP4R3A-208ENST00000555462 ASGR2P07307 311 aa15.87■□□□□ 0.13
PPP4R3A-208ENST00000555462 VEGFCP49767 419 aa15.87■□□□□ 0.13
PPP4R3A-208ENST00000555462 EFNB1P98172 346 aa15.87■□□□□ 0.13
PPP4R3A-208ENST00000555462 TNK1Q13470 666 aa15.87■□□□□ 0.13
PPP4R3A-208ENST00000555462 MLF2Q15773 248 aaPredicted RBP15.87■□□□□ 0.13
PPP4R3A-208ENST00000555462 LGALSLQ3ZCW2 172 aaPredicted RBP15.87■□□□□ 0.13
PPP4R3A-208ENST00000555462 TMEM31Q5JXX7 168 aa15.87■□□□□ 0.13
PPP4R3A-208ENST00000555462 SDR9C7Q8NEX9 313 aa15.87■□□□□ 0.13
PPP4R3A-208ENST00000555462 DNAJA4Q8WW22 397 aaPredicted RBP15.87■□□□□ 0.13
PPP4R3A-208ENST00000555462 OR14A2Q96R54 314 aa15.87■□□□□ 0.13
PPP4R3A-208ENST00000555462 RDH8Q9NYR8 311 aa15.87■□□□□ 0.13
PPP4R3A-208ENST00000555462 KLK11Q9UBX7 282 aa15.87■□□□□ 0.13
PPP4R3A-208ENST00000555462 LRRC72A6NJI9 287 aa15.86■□□□□ 0.13
PPP4R3A-208ENST00000555462 TRAPPC2P0DI81 140 aa15.86■□□□□ 0.13
PPP4R3A-208ENST00000555462 TRAPPC2BP0DI82 140 aa15.86■□□□□ 0.13
PPP4R3A-208ENST00000555462 CEBPBP17676 345 aa15.86■□□□□ 0.13
PPP4R3A-208ENST00000555462 BMP7P18075 431 aa15.86■□□□□ 0.13
PPP4R3A-208ENST00000555462 ATF1P18846 271 aa15.86■□□□□ 0.13
PPP4R3A-208ENST00000555462 EXOSC7Q15024 291 aaKnown RBP15.86■□□□□ 0.13
PPP4R3A-208ENST00000555462 GET4Q7L5D6 327 aaPredicted RBP15.86■□□□□ 0.13
PPP4R3A-208ENST00000555462 ZNF485Q8NCK3 441 aa15.86■□□□□ 0.13
PPP4R3A-208ENST00000555462 ABHD4Q8TB40 342 aa15.86■□□□□ 0.13
PPP4R3A-208ENST00000555462 FGF11Q92914 225 aa15.86■□□□□ 0.13
PPP4R3A-208ENST00000555462 PTP4A1Q93096 173 aa15.86■□□□□ 0.13
PPP4R3A-208ENST00000555462 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.86■□□□□ 0.13
PPP4R3A-208ENST00000555462 STARD5Q9NSY2 213 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms