RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 PLPPR5Q32ZL2 321 aa12.33□□□□□ -0.44
SNX6-203ENST00000555416 TIGD2Q4W5G0 525 aa12.33□□□□□ -0.44
SNX6-203ENST00000555416 MEX3BQ6ZN04 569 aaKnown RBP12.33□□□□□ -0.44
SNX6-203ENST00000555416 ZNF621Q6ZSS3 439 aa12.33□□□□□ -0.44
SNX6-203ENST00000555416 GGNQ86UU5 652 aa12.33□□□□□ -0.44
SNX6-203ENST00000555416 MED12LQ86YW9 2145 aa12.33□□□□□ -0.44
SNX6-203ENST00000555416 FUNDC1Q8IVP5 155 aa12.33□□□□□ -0.44
SNX6-203ENST00000555416 ZNF614Q8N883 585 aa12.33□□□□□ -0.44
SNX6-203ENST00000555416 GLB1L3Q8NCI6 653 aaPredicted RBP12.33□□□□□ -0.44
SNX6-203ENST00000555416 B4GALNT2Q8NHY0 566 aa12.33□□□□□ -0.44
SNX6-203ENST00000555416 RFWD2Q8NHY2 731 aa12.33□□□□□ -0.44
SNX6-203ENST00000555416 SMPDL3BQ92485 455 aa12.33□□□□□ -0.44
SNX6-203ENST00000555416 AURKBQ96GD4 344 aaPredicted RBP12.33□□□□□ -0.44
SNX6-203ENST00000555416 ZNF845Q96IR2 970 aaPredicted RBP12.33□□□□□ -0.44
SNX6-203ENST00000555416 ZBTB18Q99592 522 aa12.33□□□□□ -0.44
SNX6-203ENST00000555416 TCF7L2Q9NQB0 619 aa12.33□□□□□ -0.44
SNX6-203ENST00000555416 ICAM5Q9UMF0 924 aa12.33□□□□□ -0.44
SNX6-203ENST00000555416 DTNAQ9Y4J8 743 aa12.33□□□□□ -0.44
SNX6-203ENST00000555416 DUXAA6NLW8 204 aa12.32□□□□□ -0.44
SNX6-203ENST00000555416 HSPB2A8KAH6 182 aa12.32□□□□□ -0.44
SNX6-203ENST00000555416 STX11O75558 287 aa12.32□□□□□ -0.44
SNX6-203ENST00000555416 UGT2B17O75795 530 aa12.32□□□□□ -0.44
SNX6-203ENST00000555416 TGDSO95455 350 aa12.32□□□□□ -0.44
SNX6-203ENST00000555416 IL2RAP01589 272 aa12.32□□□□□ -0.44
SNX6-203ENST00000555416 IL6P05231 212 aa12.32□□□□□ -0.44
SNX6-203ENST00000555416 LINGO3P0C6S8 592 aa12.32□□□□□ -0.44
SNX6-203ENST00000555416 SHC1P29353 583 aa12.32□□□□□ -0.44
SNX6-203ENST00000555416 ZNF141Q15928 474 aa12.32□□□□□ -0.44
SNX6-203ENST00000555416 HSPB2Q16082 182 aa12.32□□□□□ -0.44
SNX6-203ENST00000555416 SYPL1Q16563 259 aa12.32□□□□□ -0.44
SNX6-203ENST00000555416 GLYR1Q49A26 553 aaPredicted RBP12.32□□□□□ -0.44
SNX6-203ENST00000555416 TYW3Q6IPR3 259 aaKnown RBP12.32□□□□□ -0.44
SNX6-203ENST00000555416 FRRS1Q6ZNA5 592 aa12.32□□□□□ -0.44
SNX6-203ENST00000555416 C16orf62Q7Z3J2 963 aa12.32□□□□□ -0.44
SNX6-203ENST00000555416 GCNT2Q8N0V5 402 aa12.32□□□□□ -0.44
SNX6-203ENST00000555416 MIER2Q8N344 545 aa12.32□□□□□ -0.44
SNX6-203ENST00000555416 GTPBP8Q8N3Z3 284 aaPredicted RBP12.32□□□□□ -0.44
SNX6-203ENST00000555416 ANKFN1Q8N957 763 aa12.32□□□□□ -0.44
SNX6-203ENST00000555416 FIG4Q92562 907 aa12.32□□□□□ -0.44
SNX6-203ENST00000555416 ROPN1LQ96C74 230 aa12.32□□□□□ -0.44
SNX6-203ENST00000555416 MAGEB18Q96M61 343 aa12.32□□□□□ -0.44
SNX6-203ENST00000555416 RNF145Q96MT1 663 aa12.32□□□□□ -0.44
SNX6-203ENST00000555416 UCN2Q96RP3 112 aa12.32□□□□□ -0.44
SNX6-203ENST00000555416 SPOCK3Q9BQ16 436 aa12.32□□□□□ -0.44
SNX6-203ENST00000555416 PIGQQ9BRB3 760 aa12.32□□□□□ -0.44
SNX6-203ENST00000555416 NMUR2Q9GZQ4 415 aa12.32□□□□□ -0.44
SNX6-203ENST00000555416 HOXD1Q9GZZ0 328 aa12.32□□□□□ -0.44
SNX6-203ENST00000555416 QRSL1Q9H0R6 528 aaKnown RBP12.32□□□□□ -0.44
SNX6-203ENST00000555416 SLC52A3Q9NQ40 469 aa12.32□□□□□ -0.44
SNX6-203ENST00000555416 HEATR5AQ86XA9 2040 aa12.32□□□□□ -0.44
SNX6-203ENST00000555416 FAM234BA2RU67 622 aa12.31□□□□□ -0.44
SNX6-203ENST00000555416 SERINC4A6NH21 518 aa12.31□□□□□ -0.44
SNX6-203ENST00000555416 CLDN24A6NM45 220 aa12.31□□□□□ -0.44
SNX6-203ENST00000555416 RFXANKO14593 260 aa12.31□□□□□ -0.44
SNX6-203ENST00000555416 POLR3GO15318 223 aaPredicted RBP12.31□□□□□ -0.44
SNX6-203ENST00000555416 KIAA0513O60268 411 aa12.31□□□□□ -0.44
SNX6-203ENST00000555416 SOX30O94993 753 aa12.31□□□□□ -0.44
SNX6-203ENST00000555416 CHRM4P08173 479 aa12.31□□□□□ -0.44
SNX6-203ENST00000555416 TMIGD3P0DMS9 266 aaPredicted RBP12.31□□□□□ -0.44
SNX6-203ENST00000555416 PEPDP12955 493 aa12.31□□□□□ -0.44
SNX6-203ENST00000555416 HOXB9P17482 250 aaPredicted RBP12.31□□□□□ -0.44
SNX6-203ENST00000555416 MRPL19P49406 292 aaKnown RBP12.31□□□□□ -0.44
SNX6-203ENST00000555416 KHKP50053 298 aa12.31□□□□□ -0.44
SNX6-203ENST00000555416 CHRNEQ04844 493 aa12.31□□□□□ -0.44
SNX6-203ENST00000555416 FOXF1Q12946 379 aa12.31□□□□□ -0.44
SNX6-203ENST00000555416 CTU2Q2VPK5 515 aaKnown RBP12.31□□□□□ -0.44
SNX6-203ENST00000555416 SLC25A35Q3KQZ1 300 aa12.31□□□□□ -0.44
SNX6-203ENST00000555416 SLC2A7Q6PXP3 512 aa12.31□□□□□ -0.44
SNX6-203ENST00000555416 MTERF4Q7Z6M4 381 aaKnown RBP12.31□□□□□ -0.44
SNX6-203ENST00000555416 MISPQ8IVT2 679 aa12.31□□□□□ -0.44
SNX6-203ENST00000555416 DMRTC2Q8IXT2 367 aaPredicted RBP12.31□□□□□ -0.44
SNX6-203ENST00000555416 ZNF527Q8NB42 609 aa12.31□□□□□ -0.44
SNX6-203ENST00000555416 GPR119Q8TDV5 335 aa12.31□□□□□ -0.44
SNX6-203ENST00000555416 ZFP90Q8TF47 636 aa12.31□□□□□ -0.44
SNX6-203ENST00000555416 WNT2BQ93097 391 aa12.31□□□□□ -0.44
SNX6-203ENST00000555416 INTS12Q96CB8 462 aaKnown RBP12.31□□□□□ -0.44
SNX6-203ENST00000555416 DTNBP1Q96EV8 351 aa12.31□□□□□ -0.44
SNX6-203ENST00000555416 CCDC28BQ9BUN5 200 aa12.31□□□□□ -0.44
SNX6-203ENST00000555416 SAP130Q9H0E3 1048 aa12.31□□□□□ -0.44
SNX6-203ENST00000555416 TMEM185BQ9H7F4 350 aa12.31□□□□□ -0.44
SNX6-203ENST00000555416 L3MBTL1Q9Y468 752 aa12.31□□□□□ -0.44
SNX6-203ENST00000555416 TACC2O95359 2948 aa12.31□□□□□ -0.44
SNX6-203ENST00000555416 A0A087WZY1 265 aa12.3□□□□□ -0.44
SNX6-203ENST00000555416 C7orf72A4D263 438 aa12.3□□□□□ -0.44
SNX6-203ENST00000555416 FAM47E-STBD1D6RA91 191 aa12.3□□□□□ -0.44
SNX6-203ENST00000555416 GTPBP1O00178 669 aaKnown RBP12.3□□□□□ -0.44
SNX6-203ENST00000555416 EDF1O60869 148 aaKnown RBP12.3□□□□□ -0.44
SNX6-203ENST00000555416 ADAM11O75078 769 aa12.3□□□□□ -0.44
SNX6-203ENST00000555416 RCBTB2O95199 551 aa12.3□□□□□ -0.44
SNX6-203ENST00000555416 H6PDO95479 791 aa12.3□□□□□ -0.44
SNX6-203ENST00000555416 AK1P00568 194 aa12.3□□□□□ -0.44
SNX6-203ENST00000555416 UBL4AP11441 157 aa12.3□□□□□ -0.44
SNX6-203ENST00000555416 ZNF17P17021 662 aa12.3□□□□□ -0.44
SNX6-203ENST00000555416 CTSSP25774 331 aa12.3□□□□□ -0.44
SNX6-203ENST00000555416 SLC6A8P48029 635 aa12.3□□□□□ -0.44
SNX6-203ENST00000555416 P2RX1P51575 399 aa12.3□□□□□ -0.44
SNX6-203ENST00000555416 KRTAP10-9P60411 292 aa12.3□□□□□ -0.44
SNX6-203ENST00000555416 SKP2Q13309 424 aa12.3□□□□□ -0.44
SNX6-203ENST00000555416 SF3B4Q15427 424 aaKnown RBP eCLIP12.3□□□□□ -0.44
SNX6-203ENST00000555416 ATAD3BQ5T9A4 648 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms