RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 C1QL1O75973 258 aa9.97□□□□□ -0.81
SHMT2-218ENST00000555213 PRSS23O95084 383 aa9.97□□□□□ -0.81
SHMT2-218ENST00000555213 EPPINO95925 133 aa9.97□□□□□ -0.81
SHMT2-218ENST00000555213 GUSBP08236 651 aa9.97□□□□□ -0.81
SHMT2-218ENST00000555213 NR2F1P10589 423 aa9.97□□□□□ -0.81
SHMT2-218ENST00000555213 ENDOUP21128 410 aaKnown RBP9.97□□□□□ -0.81
SHMT2-218ENST00000555213 MAGEA2P43356 314 aa9.97□□□□□ -0.81
SHMT2-218ENST00000555213 CRISP3P54108 245 aa9.97□□□□□ -0.81
SHMT2-218ENST00000555213 PMP22Q01453 160 aa9.97□□□□□ -0.81
SHMT2-218ENST00000555213 ELOAQ14241 798 aaKnown RBP9.97□□□□□ -0.81
SHMT2-218ENST00000555213 DUSP7Q16829 419 aa9.97□□□□□ -0.81
SHMT2-218ENST00000555213 GLIPR1L2Q4G1C9 344 aa9.97□□□□□ -0.81
SHMT2-218ENST00000555213 LPCAT4Q643R3 524 aa9.97□□□□□ -0.81
SHMT2-218ENST00000555213 AMIGO2Q86SJ2 522 aa9.97□□□□□ -0.81
SHMT2-218ENST00000555213 COMTD1Q86VU5 262 aa9.97□□□□□ -0.81
SHMT2-218ENST00000555213 MISPQ8IVT2 679 aa9.97□□□□□ -0.81
SHMT2-218ENST00000555213 GPR32P1Q8NGA4 272 aa9.97□□□□□ -0.81
SHMT2-218ENST00000555213 GRHL3Q8TE85 626 aa9.97□□□□□ -0.81
SHMT2-218ENST00000555213 FAR1Q8WVX9 515 aa9.97□□□□□ -0.81
SHMT2-218ENST00000555213 OIT3Q8WWZ8 545 aa9.97□□□□□ -0.81
SHMT2-218ENST00000555213 SNRNP40Q96DI7 357 aaKnown RBP9.97□□□□□ -0.81
SHMT2-218ENST00000555213 RNF145Q96MT1 663 aa9.97□□□□□ -0.81
SHMT2-218ENST00000555213 TRNT1Q96Q11 434 aaKnown RBP9.97□□□□□ -0.81
SHMT2-218ENST00000555213 SDF2Q99470 211 aa9.97□□□□□ -0.81
SHMT2-218ENST00000555213 TREX2Q9BQ50 279 aaPredicted RBP9.97□□□□□ -0.81
SHMT2-218ENST00000555213 UGT2B28Q9BY64 529 aa9.97□□□□□ -0.81
SHMT2-218ENST00000555213 TTTY12Q9BZ98 90 aa9.97□□□□□ -0.81
SHMT2-218ENST00000555213 ZNF350Q9GZX5 532 aa9.97□□□□□ -0.81
SHMT2-218ENST00000555213 SAP130Q9H0E3 1048 aa9.97□□□□□ -0.81
SHMT2-218ENST00000555213 SLC38A1Q9H2H9 487 aa9.97□□□□□ -0.81
SHMT2-218ENST00000555213 MAGIXQ9H6Y5 334 aa9.97□□□□□ -0.81
SHMT2-218ENST00000555213 ZFP64Q9NPA5 681 aa9.97□□□□□ -0.81
SHMT2-218ENST00000555213 DEPPQ9NTK1 212 aa9.97□□□□□ -0.81
SHMT2-218ENST00000555213 C6orf203Q9P0P8 240 aaPredicted RBP9.97□□□□□ -0.81
SHMT2-218ENST00000555213 PPP4R1LQ9P1A2 415 aa9.97□□□□□ -0.81
SHMT2-218ENST00000555213 AURKCQ9UQB9 309 aa9.97□□□□□ -0.81
SHMT2-218ENST00000555213 WDR45Q9Y484 360 aa9.97□□□□□ -0.81
SHMT2-218ENST00000555213 CHST2Q9Y4C5 530 aa9.97□□□□□ -0.81
SHMT2-218ENST00000555213 GPC6Q9Y625 555 aaPredicted RBP9.97□□□□□ -0.81
SHMT2-218ENST00000555213 V9GYQ6 96 aa9.97□□□□□ -0.81
SHMT2-218ENST00000555213 ASH1LQ9NR48 2969 aaKnown RBP9.97□□□□□ -0.81
SHMT2-218ENST00000555213 A0A0G2JPF8 293 aa9.96□□□□□ -0.82
SHMT2-218ENST00000555213 FAM166BA8MTA8 275 aa9.96□□□□□ -0.82
SHMT2-218ENST00000555213 HNRNPCL2B2RXH8 293 aa9.96□□□□□ -0.82
SHMT2-218ENST00000555213 HNRNPCL3B7ZW38 293 aa9.96□□□□□ -0.82
SHMT2-218ENST00000555213 SNPHO15079 494 aa9.96□□□□□ -0.82
SHMT2-218ENST00000555213 KIAA0513O60268 411 aa9.96□□□□□ -0.82
SHMT2-218ENST00000555213 TRIM3O75382 744 aaPredicted RBP9.96□□□□□ -0.82
SHMT2-218ENST00000555213 GMNNO75496 209 aa9.96□□□□□ -0.82
SHMT2-218ENST00000555213 STAMBPO95630 424 aa9.96□□□□□ -0.82
SHMT2-218ENST00000555213 IGKV1D-16P01601 117 aa9.96□□□□□ -0.82
SHMT2-218ENST00000555213 MT-ND1P03886 318 aa9.96□□□□□ -0.82
SHMT2-218ENST00000555213 OPN1SWP03999 348 aa9.96□□□□□ -0.82
SHMT2-218ENST00000555213 BCHEP06276 602 aa9.96□□□□□ -0.82
SHMT2-218ENST00000555213 HNRNPCL4P0DMR1 293 aa9.96□□□□□ -0.82
SHMT2-218ENST00000555213 RAP2AP10114 183 aa9.96□□□□□ -0.82
SHMT2-218ENST00000555213 TBXA2RP21731 343 aa9.96□□□□□ -0.82
SHMT2-218ENST00000555213 FUT4P22083 530 aa9.96□□□□□ -0.82
SHMT2-218ENST00000555213 DCTP40126 519 aa9.96□□□□□ -0.82
SHMT2-218ENST00000555213 RFC3P40938 356 aa9.96□□□□□ -0.82
SHMT2-218ENST00000555213 MLLT10P55197 1068 aa9.96□□□□□ -0.82
SHMT2-218ENST00000555213 PPIAP62937 165 aaKnown RBP9.96□□□□□ -0.82
SHMT2-218ENST00000555213 CHRNEQ04844 493 aa9.96□□□□□ -0.82
SHMT2-218ENST00000555213 GRAMD1BQ3KR37 738 aa9.96□□□□□ -0.82
SHMT2-218ENST00000555213 PRR30Q53SZ7 412 aaPredicted RBP9.96□□□□□ -0.82
SHMT2-218ENST00000555213 OGFRL1Q5TC84 451 aaPredicted RBP9.96□□□□□ -0.82
SHMT2-218ENST00000555213 PRAMEF8Q5VWM4 474 aa9.96□□□□□ -0.82
SHMT2-218ENST00000555213 PRAMEF7Q5VXH5 474 aa9.96□□□□□ -0.82
SHMT2-218ENST00000555213 BICRALQ6AI39 1079 aa9.96□□□□□ -0.82
SHMT2-218ENST00000555213 LRRC74BQ6ZQY2 392 aa9.96□□□□□ -0.82
SHMT2-218ENST00000555213 PIWIL3Q7Z3Z3 882 aaKnown RBP9.96□□□□□ -0.82
SHMT2-218ENST00000555213 ATCAYQ86WG3 371 aa9.96□□□□□ -0.82
SHMT2-218ENST00000555213 SLC30A8Q8IWU4 369 aa9.96□□□□□ -0.82
SHMT2-218ENST00000555213 ZNF619Q8N2I2 560 aa9.96□□□□□ -0.82
SHMT2-218ENST00000555213 FAM109AQ8N4B1 249 aa9.96□□□□□ -0.82
SHMT2-218ENST00000555213 ZNF614Q8N883 585 aa9.96□□□□□ -0.82
SHMT2-218ENST00000555213 OR1J4Q8NGS1 313 aa9.96□□□□□ -0.82
SHMT2-218ENST00000555213 NR4A3Q92570 626 aa9.96□□□□□ -0.82
SHMT2-218ENST00000555213 PMM1Q92871 262 aa9.96□□□□□ -0.82
SHMT2-218ENST00000555213 TAAR6Q96RI8 345 aa9.96□□□□□ -0.82
SHMT2-218ENST00000555213 SLC29A1Q99808 456 aa9.96□□□□□ -0.82
SHMT2-218ENST00000555213 SEMA6AQ9H2E6 1030 aa9.96□□□□□ -0.82
SHMT2-218ENST00000555213 GALNT9Q9HCQ5 603 aa9.96□□□□□ -0.82
SHMT2-218ENST00000555213 IL1RAPQ9NPH3 570 aa9.96□□□□□ -0.82
SHMT2-218ENST00000555213 ASF1BQ9NVP2 202 aa9.96□□□□□ -0.82
SHMT2-218ENST00000555213 TUBA8Q9NY65 449 aaPredicted RBP9.96□□□□□ -0.82
SHMT2-218ENST00000555213 KCNE5Q9UJ90 142 aa9.96□□□□□ -0.82
SHMT2-218ENST00000555213 DSPPQ9NZW4 1301 aa9.96□□□□□ -0.82
SHMT2-218ENST00000555213 A0A1W2PQD3 144 aa9.95□□□□□ -0.82
SHMT2-218ENST00000555213 LRRC3CA6NJW4 275 aa9.95□□□□□ -0.82
SHMT2-218ENST00000555213 ALG1L2C9J202 215 aa9.95□□□□□ -0.82
SHMT2-218ENST00000555213 FAM47E-STBD1D6RA91 191 aa9.95□□□□□ -0.82
SHMT2-218ENST00000555213 NDUFB5O43674 189 aa9.95□□□□□ -0.82
SHMT2-218ENST00000555213 FADS1O60427 444 aa9.95□□□□□ -0.82
SHMT2-218ENST00000555213 SEMA7AO75326 666 aa9.95□□□□□ -0.82
SHMT2-218ENST00000555213 H6PDO95479 791 aa9.95□□□□□ -0.82
SHMT2-218ENST00000555213 OXSR1O95747 527 aaPredicted RBP9.95□□□□□ -0.82
SHMT2-218ENST00000555213 ZNF682O95780 498 aa9.95□□□□□ -0.82
SHMT2-218ENST00000555213 ANGPTL1O95841 491 aa9.95□□□□□ -0.82
SHMT2-218ENST00000555213 ETS2P15036 469 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms