RNA–Protein interactions for RNA: ENST00000554975.5

SHMT2-216, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-216ENST00000554975 C9J4A7 227 aa10.28□□□□□ -0.76
SHMT2-216ENST00000554975 CLDN25C9JDP6 229 aa10.28□□□□□ -0.76
SHMT2-216ENST00000554975 RTCAO00442 366 aaKnown RBP10.28□□□□□ -0.76
SHMT2-216ENST00000554975 ZNF749O43361 778 aa10.28□□□□□ -0.76
SHMT2-216ENST00000554975 EMC8O43402 210 aa10.28□□□□□ -0.76
SHMT2-216ENST00000554975 OR2B3O76000 313 aa10.28□□□□□ -0.76
SHMT2-216ENST00000554975 KLHL18O94889 574 aa10.28□□□□□ -0.76
SHMT2-216ENST00000554975 MFN2O95140 757 aa10.28□□□□□ -0.76
SHMT2-216ENST00000554975 SERPIND1P05546 499 aa10.28□□□□□ -0.76
SHMT2-216ENST00000554975 CDK1P06493 297 aa10.28□□□□□ -0.76
SHMT2-216ENST00000554975 UMODP07911 640 aa10.28□□□□□ -0.76
SHMT2-216ENST00000554975 NR2F6P10588 404 aa10.28□□□□□ -0.76
SHMT2-216ENST00000554975 NR2F1P10589 423 aa10.28□□□□□ -0.76
SHMT2-216ENST00000554975 CSNK2A2P19784 350 aaPredicted RBP10.28□□□□□ -0.76
SHMT2-216ENST00000554975 GSTM3P21266 225 aa10.28□□□□□ -0.76
SHMT2-216ENST00000554975 BCL6P41182 706 aa10.28□□□□□ -0.76
SHMT2-216ENST00000554975 KCNJ5P48544 419 aa10.28□□□□□ -0.76
SHMT2-216ENST00000554975 IDH2P48735 452 aaKnown RBP10.28□□□□□ -0.76
SHMT2-216ENST00000554975 ENTPD1P49961 510 aa10.28□□□□□ -0.76
SHMT2-216ENST00000554975 NCBP2P52298 156 aaKnown RBP eCLIP10.28□□□□□ -0.76
SHMT2-216ENST00000554975 EMP3P54852 163 aa10.28□□□□□ -0.76
SHMT2-216ENST00000554975 ALDH6A1Q02252 535 aaKnown RBP10.28□□□□□ -0.76
SHMT2-216ENST00000554975 LAPTM4AQ15012 233 aa10.28□□□□□ -0.76
SHMT2-216ENST00000554975 TMEM44Q2T9K0 475 aa10.28□□□□□ -0.76
SHMT2-216ENST00000554975 ATAD3BQ5T9A4 648 aa10.28□□□□□ -0.76
SHMT2-216ENST00000554975 ZNF324BQ6AW86 544 aaPredicted RBP10.28□□□□□ -0.76
SHMT2-216ENST00000554975 MRM1Q6IN84 353 aaKnown RBP10.28□□□□□ -0.76
SHMT2-216ENST00000554975 ZNF425Q6IV72 752 aa10.28□□□□□ -0.76
SHMT2-216ENST00000554975 TNFAIP8L2Q6P589 184 aaPredicted RBP10.28□□□□□ -0.76
SHMT2-216ENST00000554975 ABHD17CQ6PCB6 329 aa10.28□□□□□ -0.76
SHMT2-216ENST00000554975 SLC16A12Q6ZSM3 486 aa10.28□□□□□ -0.76
SHMT2-216ENST00000554975 SZRD1Q7Z422 152 aa10.28□□□□□ -0.76
SHMT2-216ENST00000554975 ADCK1Q86TW2 530 aa10.28□□□□□ -0.76
SHMT2-216ENST00000554975 PLD3Q8IV08 490 aa10.28□□□□□ -0.76
SHMT2-216ENST00000554975 STX19Q8N4C7 294 aa10.28□□□□□ -0.76
SHMT2-216ENST00000554975 ZNF808Q8N4W9 903 aaPredicted RBP10.28□□□□□ -0.76
SHMT2-216ENST00000554975 ZNF655Q8N720 491 aaPredicted RBP10.28□□□□□ -0.76
SHMT2-216ENST00000554975 AQP11Q8NBQ7 271 aa10.28□□□□□ -0.76
SHMT2-216ENST00000554975 RHOXF1Q8NHV9 184 aa10.28□□□□□ -0.76
SHMT2-216ENST00000554975 B4GALNT2Q8NHY0 566 aa10.28□□□□□ -0.76
SHMT2-216ENST00000554975 SLC38A5Q8WUX1 472 aa10.28□□□□□ -0.76
SHMT2-216ENST00000554975 SLC38A4Q969I6 547 aa10.28□□□□□ -0.76
SHMT2-216ENST00000554975 MS4A6EQ96DS6 147 aa10.28□□□□□ -0.76
SHMT2-216ENST00000554975 VMP1Q96GC9 406 aa10.28□□□□□ -0.76
SHMT2-216ENST00000554975 PRRC1Q96M27 445 aa10.28□□□□□ -0.76
SHMT2-216ENST00000554975 AMDHD1Q96NU7 426 aa10.28□□□□□ -0.76
SHMT2-216ENST00000554975 IP6K3Q96PC2 410 aa10.28□□□□□ -0.76
SHMT2-216ENST00000554975 SORBS1Q9BX66 1292 aaKnown RBP10.28□□□□□ -0.76
SHMT2-216ENST00000554975 PINK1Q9BXM7 581 aa10.28□□□□□ -0.76
SHMT2-216ENST00000554975 EVA1AQ9H8M9 152 aa10.28□□□□□ -0.76
SHMT2-216ENST00000554975 FAM60AQ9NP50 221 aa10.28□□□□□ -0.76
SHMT2-216ENST00000554975 SLC6A20Q9NP91 592 aa10.28□□□□□ -0.76
SHMT2-216ENST00000554975 CHST11Q9NPF2 352 aa10.28□□□□□ -0.76
SHMT2-216ENST00000554975 KRCC1Q9NPI7 259 aaPredicted RBP10.28□□□□□ -0.76
SHMT2-216ENST00000554975 ACER3Q9NUN7 267 aa10.28□□□□□ -0.76
SHMT2-216ENST00000554975 FKBP14Q9NWM8 211 aa10.28□□□□□ -0.76
SHMT2-216ENST00000554975 TEX10Q9NXF1 929 aaPredicted RBP10.28□□□□□ -0.76
SHMT2-216ENST00000554975 ERVK-18Q9QC07 812 aa10.28□□□□□ -0.76
SHMT2-216ENST00000554975 NDOR1Q9UHB4 597 aa10.28□□□□□ -0.76
SHMT2-216ENST00000554975 SH3GLB1Q9Y371 365 aa10.28□□□□□ -0.76
SHMT2-216ENST00000554975 SPACA6W5XKT8 324 aa10.28□□□□□ -0.76
SHMT2-216ENST00000554975 NINQ8N4C6 2090 aa10.28□□□□□ -0.76
SHMT2-216ENST00000554975 DSPPQ9NZW4 1301 aa10.28□□□□□ -0.76
SHMT2-216ENST00000554975 A0A0G2JPF8 293 aa10.27□□□□□ -0.77
SHMT2-216ENST00000554975 FEZF1A0PJY2 475 aa10.27□□□□□ -0.77
SHMT2-216ENST00000554975 DUXAA6NLW8 204 aa10.27□□□□□ -0.77
SHMT2-216ENST00000554975 SNTNA6NMZ2 147 aa10.27□□□□□ -0.77
SHMT2-216ENST00000554975 ZAR1LA6NP61 321 aa10.27□□□□□ -0.77
SHMT2-216ENST00000554975 HNRNPCL2B2RXH8 293 aa10.27□□□□□ -0.77
SHMT2-216ENST00000554975 HNRNPCL3B7ZW38 293 aa10.27□□□□□ -0.77
SHMT2-216ENST00000554975 HMGN4O00479 90 aa10.27□□□□□ -0.77
SHMT2-216ENST00000554975 PEX12O00623 359 aa10.27□□□□□ -0.77
SHMT2-216ENST00000554975 PCDH17O14917 1159 aa10.27□□□□□ -0.77
SHMT2-216ENST00000554975 HCRTR1O43613 425 aa10.27□□□□□ -0.77
SHMT2-216ENST00000554975 BCAS1O75363 584 aaPredicted RBP10.27□□□□□ -0.77
SHMT2-216ENST00000554975 WBP4O75554 376 aaKnown RBP10.27□□□□□ -0.77
SHMT2-216ENST00000554975 INMTO95050 263 aa10.27□□□□□ -0.77
SHMT2-216ENST00000554975 NADKO95544 446 aaPredicted RBP10.27□□□□□ -0.77
SHMT2-216ENST00000554975 TBX6O95947 436 aaPredicted RBP10.27□□□□□ -0.77
SHMT2-216ENST00000554975 CTSBP07858 339 aa10.27□□□□□ -0.77
SHMT2-216ENST00000554975 HBQ1P09105 142 aa10.27□□□□□ -0.77
SHMT2-216ENST00000554975 TFPTP0C1Z6 253 aa10.27□□□□□ -0.77
SHMT2-216ENST00000554975 HNRNPCL4P0DMR1 293 aa10.27□□□□□ -0.77
SHMT2-216ENST00000554975 OSMP13725 252 aa10.27□□□□□ -0.77
SHMT2-216ENST00000554975 ZNF182P17025 639 aaPredicted RBP10.27□□□□□ -0.77
SHMT2-216ENST00000554975 ATP5A1P25705 553 aaKnown RBP10.27□□□□□ -0.77
SHMT2-216ENST00000554975 SSTR2P30874 369 aa10.27□□□□□ -0.77
SHMT2-216ENST00000554975 MPIP34949 423 aa10.27□□□□□ -0.77
SHMT2-216ENST00000554975 UGT2B10P36537 528 aa10.27□□□□□ -0.77
SHMT2-216ENST00000554975 FOLR3P41439 243 aa10.27□□□□□ -0.77
SHMT2-216ENST00000554975 MASP1P48740 699 aa10.27□□□□□ -0.77
SHMT2-216ENST00000554975 CRISP1P54107 249 aa10.27□□□□□ -0.77
SHMT2-216ENST00000554975 ADORA2A-AS1P86434 159 aa10.27□□□□□ -0.77
SHMT2-216ENST00000554975 RELAQ04206 551 aa10.27□□□□□ -0.77
SHMT2-216ENST00000554975 COX10Q12887 443 aa10.27□□□□□ -0.77
SHMT2-216ENST00000554975 CEBPEQ15744 281 aa10.27□□□□□ -0.77
SHMT2-216ENST00000554975 VWA2Q5GFL6 755 aa10.27□□□□□ -0.77
SHMT2-216ENST00000554975 TMEM201Q5SNT2 666 aa10.27□□□□□ -0.77
SHMT2-216ENST00000554975 C1orf189Q5VU69 101 aa10.27□□□□□ -0.77
SHMT2-216ENST00000554975 ANKRD34AQ69YU3 496 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms