RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 RSPH9Q9H1X1 276 aaPredicted RBP11.06□□□□□ -0.64
XRCC3-208ENST00000554811 TRIM36Q9NQ86 728 aa11.06□□□□□ -0.64
XRCC3-208ENST00000554811 NANSQ9NR45 359 aa11.06□□□□□ -0.64
XRCC3-208ENST00000554811 ACSS1Q9NUB1 689 aaPredicted RBP11.06□□□□□ -0.64
XRCC3-208ENST00000554811 SLC27A6Q9Y2P4 619 aa11.06□□□□□ -0.64
XRCC3-208ENST00000554811 MED12Q93074 2177 aa11.06□□□□□ -0.64
XRCC3-208ENST00000554811 SERTM1A2A2V5 107 aa11.05□□□□□ -0.64
XRCC3-208ENST00000554811 UNC119BA6NIH7 251 aa11.05□□□□□ -0.64
XRCC3-208ENST00000554811 ZSCAN5BA6NJL1 495 aa11.05□□□□□ -0.64
XRCC3-208ENST00000554811 LANCL1O43813 399 aa11.05□□□□□ -0.64
XRCC3-208ENST00000554811 CLEC3AO75596 197 aa11.05□□□□□ -0.64
XRCC3-208ENST00000554811 SCO1O75880 301 aa11.05□□□□□ -0.64
XRCC3-208ENST00000554811 DHFRP00374 187 aa11.05□□□□□ -0.64
XRCC3-208ENST00000554811 ARSBP15848 533 aa11.05□□□□□ -0.64
XRCC3-208ENST00000554811 TBXA2RP21731 343 aa11.05□□□□□ -0.64
XRCC3-208ENST00000554811 DDX6P26196 483 aaKnown RBP eCLIP11.05□□□□□ -0.64
XRCC3-208ENST00000554811 TEAD1P28347 426 aa11.05□□□□□ -0.64
XRCC3-208ENST00000554811 C21orf58P58505 322 aa11.05□□□□□ -0.64
XRCC3-208ENST00000554811 OCLNQ16625 522 aa11.05□□□□□ -0.64
XRCC3-208ENST00000554811 SMUG1Q53HV7 270 aa11.05□□□□□ -0.64
XRCC3-208ENST00000554811 Q5BKY6 102 aa11.05□□□□□ -0.64
XRCC3-208ENST00000554811 C3orf38Q5JPI3 329 aa11.05□□□□□ -0.64
XRCC3-208ENST00000554811 C1orf94Q6P1W5 598 aa11.05□□□□□ -0.64
XRCC3-208ENST00000554811 NRROSQ86YC3 692 aa11.05□□□□□ -0.64
XRCC3-208ENST00000554811 OR5H6Q8NGV6 325 aa11.05□□□□□ -0.64
XRCC3-208ENST00000554811 TRIM63Q969Q1 353 aa11.05□□□□□ -0.64
XRCC3-208ENST00000554811 THAP7Q9BT49 309 aaPredicted RBP11.05□□□□□ -0.64
XRCC3-208ENST00000554811 ACTRT3Q9BYD9 372 aa11.05□□□□□ -0.64
XRCC3-208ENST00000554811 KCNN2Q9H2S1 579 aa11.05□□□□□ -0.64
XRCC3-208ENST00000554811 MDC1Q14676 2089 aaKnown RBP11.05□□□□□ -0.64
XRCC3-208ENST00000554811 A0A0B4J293 547 aa11.05□□□□□ -0.64
XRCC3-208ENST00000554811 BLOC1S5-TXNDC5H3BN57 136 aa11.05□□□□□ -0.64
XRCC3-208ENST00000554811 GTPBP1O00178 669 aaKnown RBP11.05□□□□□ -0.64
XRCC3-208ENST00000554811 FABP7O15540 132 aa11.05□□□□□ -0.64
XRCC3-208ENST00000554811 EML2O95834 649 aa11.05□□□□□ -0.64
XRCC3-208ENST00000554811 EPPINO95925 133 aa11.05□□□□□ -0.64
XRCC3-208ENST00000554811 BMP8BP34820 402 aa11.05□□□□□ -0.64
XRCC3-208ENST00000554811 ETV6P41212 452 aa11.05□□□□□ -0.64
XRCC3-208ENST00000554811 ZNF81P51508 661 aa11.05□□□□□ -0.64
XRCC3-208ENST00000554811 VSX2P58304 361 aaPredicted RBP11.05□□□□□ -0.64
XRCC3-208ENST00000554811 BMP8AQ7Z5Y6 402 aa11.05□□□□□ -0.64
XRCC3-208ENST00000554811 GPR135Q8IZ08 494 aa11.05□□□□□ -0.64
XRCC3-208ENST00000554811 MORN4Q8NDC4 146 aa11.05□□□□□ -0.64
XRCC3-208ENST00000554811 OR5W2Q8NH69 310 aa11.05□□□□□ -0.64
XRCC3-208ENST00000554811 SETD6Q8TBK2 473 aa11.05□□□□□ -0.64
XRCC3-208ENST00000554811 ZNF431Q8TF32 576 aaPredicted RBP11.05□□□□□ -0.64
XRCC3-208ENST00000554811 ORAI3Q9BRQ5 295 aa11.05□□□□□ -0.64
XRCC3-208ENST00000554811 DPCDQ9BVM2 203 aaPredicted RBP11.05□□□□□ -0.64
XRCC3-208ENST00000554811 MRPL39Q9NYK5 338 aaKnown RBP11.05□□□□□ -0.64
XRCC3-208ENST00000554811 TBC1D29Q9UFV1 150 aa11.05□□□□□ -0.64
XRCC3-208ENST00000554811 GVINP1Q7Z2Y8 2422 aa11.05□□□□□ -0.64
XRCC3-208ENST00000554811 IQCMA0A1B0GVH7 501 aa11.05□□□□□ -0.64
XRCC3-208ENST00000554811 A0A1W2PPV9 198 aa11.05□□□□□ -0.64
XRCC3-208ENST00000554811 B3GALT2O43825 422 aa11.05□□□□□ -0.64
XRCC3-208ENST00000554811 NUDT14O95848 222 aa11.05□□□□□ -0.64
XRCC3-208ENST00000554811 CA3P07451 260 aa11.05□□□□□ -0.64
XRCC3-208ENST00000554811 GJA4P35212 333 aa11.05□□□□□ -0.64
XRCC3-208ENST00000554811 RPS27P42677 84 aaKnown RBP11.05□□□□□ -0.64
XRCC3-208ENST00000554811 SLC25A35Q3KQZ1 300 aa11.05□□□□□ -0.64
XRCC3-208ENST00000554811 ELMOD2Q8IZ81 293 aa11.05□□□□□ -0.64
XRCC3-208ENST00000554811 SLC44A3Q8N4M1 653 aa11.05□□□□□ -0.64
XRCC3-208ENST00000554811 PDCD1LG2Q9BQ51 273 aa11.05□□□□□ -0.64
XRCC3-208ENST00000554811 SLC17A9Q9BYT1 436 aa11.05□□□□□ -0.64
XRCC3-208ENST00000554811 IKZF2Q9UKS7 526 aa11.05□□□□□ -0.64
XRCC3-208ENST00000554811 ACSL5Q9ULC5 683 aa11.05□□□□□ -0.64
XRCC3-208ENST00000554811 MGAT4AQ9UM21 535 aa11.05□□□□□ -0.64
XRCC3-208ENST00000554811 ICKQ9UPZ9 632 aa11.05□□□□□ -0.64
XRCC3-208ENST00000554811 ZNF443Q9Y2A4 671 aaPredicted RBP11.05□□□□□ -0.64
XRCC3-208ENST00000554811 SIRT4Q9Y6E7 314 aaPredicted RBP11.05□□□□□ -0.64
XRCC3-208ENST00000554811 FRMPD3Q5JV73 1810 aa11.05□□□□□ -0.64
XRCC3-208ENST00000554811 THSD7BQ9C0I4 1608 aa11.04□□□□□ -0.64
XRCC3-208ENST00000554811 DPM1O60762 260 aa11.04□□□□□ -0.64
XRCC3-208ENST00000554811 APODP05090 189 aa11.04□□□□□ -0.64
XRCC3-208ENST00000554811 HMGN1P05114 100 aa11.04□□□□□ -0.64
XRCC3-208ENST00000554811 EIF4EP06730 217 aaKnown RBP11.04□□□□□ -0.64
XRCC3-208ENST00000554811 HPGDP15428 266 aa11.04□□□□□ -0.64
XRCC3-208ENST00000554811 RPA4Q13156 261 aa11.04□□□□□ -0.64
XRCC3-208ENST00000554811 EFR3AQ14156 821 aa11.04□□□□□ -0.64
XRCC3-208ENST00000554811 ELOAQ14241 798 aaKnown RBP11.04□□□□□ -0.64
XRCC3-208ENST00000554811 MAPK14Q16539 360 aa11.04□□□□□ -0.64
XRCC3-208ENST00000554811 KIAA1211LQ6NV74 962 aa11.04□□□□□ -0.64
XRCC3-208ENST00000554811 LYPD4Q6UWN0 246 aa11.04□□□□□ -0.64
XRCC3-208ENST00000554811 QSOX2Q6ZRP7 698 aa11.04□□□□□ -0.64
XRCC3-208ENST00000554811 SMARCD2Q92925 531 aa11.04□□□□□ -0.64
XRCC3-208ENST00000554811 TMEM168Q9H0V1 697 aa11.04□□□□□ -0.64
XRCC3-208ENST00000554811 TMEM27Q9HBJ8 222 aa11.04□□□□□ -0.64
XRCC3-208ENST00000554811 RBFOX1Q9NWB1 397 aaKnown RBP11.04□□□□□ -0.64
XRCC3-208ENST00000554811 PPIEQ9UNP9 301 aaKnown RBP11.04□□□□□ -0.64
XRCC3-208ENST00000554811 MAU2Q9Y6X3 613 aa11.04□□□□□ -0.64
XRCC3-208ENST00000554811 SPTBN2O15020 2390 aa11.04□□□□□ -0.64
XRCC3-208ENST00000554811 SLC9B1P1A6NJY1 282 aa11.04□□□□□ -0.64
XRCC3-208ENST00000554811 RNGTTO60942 597 aaKnown RBP11.04□□□□□ -0.64
XRCC3-208ENST00000554811 KHDRBS3O75525 346 aaKnown RBP11.04□□□□□ -0.64
XRCC3-208ENST00000554811 EDNRAP25101 427 aa11.04□□□□□ -0.64
XRCC3-208ENST00000554811 GNG2P59768 71 aa11.04□□□□□ -0.64
XRCC3-208ENST00000554811 FAPQ12884 760 aa11.04□□□□□ -0.64
XRCC3-208ENST00000554811 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.04□□□□□ -0.64
XRCC3-208ENST00000554811 FAAP20Q6NZ36 180 aa11.04□□□□□ -0.64
XRCC3-208ENST00000554811 SLC48A1Q6P1K1 146 aa11.04□□□□□ -0.64
XRCC3-208ENST00000554811 ZNF322Q6U7Q0 402 aaPredicted RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms