RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 NAA11Q9BSU3 229 aaPredicted RBP3.12□□□□□ -1.91
SYNE2-212ENST00000554584 PDE7BQ9NP56 450 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 ANKRD33BA6NCL7 494 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 PRR32B1ATL7 298 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 SERPINA5P05154 406 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 FABP3P05413 133 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 ENGP17813 658 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 METAP1P53582 386 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 HNRNPA0Q13151 305 aaKnown RBP3.12□□□□□ -1.91
SYNE2-212ENST00000554584 OR2F1Q13607 317 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 SLC22A25Q6T423 547 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 WDR49Q8IV35 697 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 LINC01599Q8WXQ3 324 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 FAM46AQ96IP4 442 aaKnown RBP3.12□□□□□ -1.91
SYNE2-212ENST00000554584 MYNNQ9NPC7 610 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 TRAF6Q9Y4K3 522 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 OR51B4Q9Y5P0 310 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 ZC3H12DA2A288 527 aaKnown RBP3.12□□□□□ -1.91
SYNE2-212ENST00000554584 I3L521 148 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 ELAVL4P26378 380 aaKnown RBP3.12□□□□□ -1.91
SYNE2-212ENST00000554584 CXADRP78310 365 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 RPL19P84098 196 aaKnown RBP3.12□□□□□ -1.91
SYNE2-212ENST00000554584 GRM7Q14831 915 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 HAS2Q92819 552 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 MCHR1Q99705 422 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 ACO2Q99798 780 aaKnown RBP3.12□□□□□ -1.91
SYNE2-212ENST00000554584 REEP4Q9H6H4 257 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 MYOTQ9UBF9 498 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 RABAC1Q9UI14 185 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 PITPNC1Q9UKF7 332 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 CHST10O43529 356 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 EGFP01133 1207 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 PDGFAP04085 211 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 IFNA4P05014 189 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 IL3P08700 152 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 WNT5AP41221 380 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 CES4AQ5XG92 561 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 GPR149Q86SP6 731 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 ZFAND4Q86XD8 727 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 ZNF461Q8TAF7 563 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 ART4Q93070 314 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 SDCBP2Q9H190 292 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 COPZ2Q9P299 210 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 APOBEC3BQ9UH17 382 aaKnown RBP3.12□□□□□ -1.91
SYNE2-212ENST00000554584 MATN1P21941 496 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 TTPAP49638 278 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 NKX2-5P52952 324 aaPredicted RBP3.12□□□□□ -1.91
SYNE2-212ENST00000554584 ERVK-16P61578 105 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 ZNF141Q15928 474 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 ZNF385BQ569K4 471 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 TPRG1LQ5T0D9 272 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 KIAA0895LQ68EN5 471 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 OGFOD3Q6PK18 319 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 OR10K1Q8NGX5 313 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 BAHD1Q8TBE0 780 aaPredicted RBP3.12□□□□□ -1.91
SYNE2-212ENST00000554584 PTGES2Q9H7Z7 377 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 TEX10Q9NXF1 929 aaPredicted RBP3.12□□□□□ -1.91
SYNE2-212ENST00000554584 METTL12A8MUP2 240 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 ZNF670-ZNF695F2Z2N8 137 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 SMAD6O43541 496 aaKnown RBP3.11□□□□□ -1.91
SYNE2-212ENST00000554584 SNX3O60493 162 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 PRKACAP17612 351 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 CHATP28329 748 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 BDKRB2P30411 391 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 RBM34P42696 430 aaKnown RBP3.11□□□□□ -1.91
SYNE2-212ENST00000554584 RBP2P50120 134 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 LIN52Q52LA3 116 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 MEGF10Q96KG7 1140 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 OR4K3Q96R72 315 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 ANKRA2Q9H9E1 313 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 DSCAML1Q8TD84 2053 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 NCR1O76036 304 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 RPS12P25398 132 aaKnown RBP3.11□□□□□ -1.91
SYNE2-212ENST00000554584 MORN1Q5T089 497 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 ZNF764Q96H86 408 aaPredicted RBP3.11□□□□□ -1.91
SYNE2-212ENST00000554584 OR6C76A6NM76 312 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 GLSO94925 669 aaPredicted RBP3.11□□□□□ -1.91
SYNE2-212ENST00000554584 RNH1P13489 461 aaKnown RBP3.11□□□□□ -1.91
SYNE2-212ENST00000554584 ADRA1BP35368 520 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 PITPNAQ00169 270 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 ABRAXAS2Q15018 415 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 GTDC1Q4AE62 458 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 SLC22A6Q4U2R8 563 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 ZDHHC21Q8IVQ6 265 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 HM13Q8TCT9 377 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 TWIST2Q8WVJ9 160 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 PCDHAC1Q9H158 963 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.11□□□□□ -1.91
SYNE2-212ENST00000554584 SORL1Q92673 2214 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 NCBP2LA6PVI3 153 aaKnown RBP3.11□□□□□ -1.91
SYNE2-212ENST00000554584 H3BMH7 237 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 PIRO00625 290 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 DUSP11O75319 330 aaKnown RBP3.11□□□□□ -1.91
SYNE2-212ENST00000554584 LSM8O95777 96 aaKnown RBP3.11□□□□□ -1.91
SYNE2-212ENST00000554584 OR5G3P0C626 314 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 PTH2RP49190 550 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 OR10V1Q8NGI7 309 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 CDK5RAP1Q96SZ6 601 aaKnown RBP3.11□□□□□ -1.91
SYNE2-212ENST00000554584 ZNF835Q9Y2P0 537 aa3.11□□□□□ -1.91
SYNE2-212ENST00000554584 SPDEFO95238 335 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms