RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 GPIP06744 558 aa4.1□□□□□ -1.75
ATXN3-227ENST00000554491 HEXAP06865 529 aa4.1□□□□□ -1.75
ATXN3-227ENST00000554491 MELTFP08582 738 aa4.1□□□□□ -1.75
ATXN3-227ENST00000554491 STAG3L2P0CL84 134 aa4.1□□□□□ -1.75
ATXN3-227ENST00000554491 GIMD1P0DJR0 217 aa4.1□□□□□ -1.75
ATXN3-227ENST00000554491 TSHRP16473 764 aa4.1□□□□□ -1.75
ATXN3-227ENST00000554491 ZNF182P17025 639 aaPredicted RBP4.1□□□□□ -1.75
ATXN3-227ENST00000554491 ANXA7P20073 488 aaKnown RBP4.1□□□□□ -1.75
ATXN3-227ENST00000554491 TAC1P20366 129 aa4.1□□□□□ -1.75
ATXN3-227ENST00000554491 PEX2P28328 305 aa4.1□□□□□ -1.75
ATXN3-227ENST00000554491 ACADLP28330 430 aa4.1□□□□□ -1.75
ATXN3-227ENST00000554491 CD6P30203 668 aa4.1□□□□□ -1.75
ATXN3-227ENST00000554491 SHMT2P34897 504 aa4.1□□□□□ -1.75
ATXN3-227ENST00000554491 SPRP35270 261 aaPredicted RBP4.1□□□□□ -1.75
ATXN3-227ENST00000554491 TECP42680 631 aa4.1□□□□□ -1.75
ATXN3-227ENST00000554491 NOVP48745 357 aa4.1□□□□□ -1.75
ATXN3-227ENST00000554491 SMSP52788 366 aa4.1□□□□□ -1.75
ATXN3-227ENST00000554491 CDH15P55291 814 aa4.1□□□□□ -1.75
ATXN3-227ENST00000554491 RAB2AP61019 212 aa4.1□□□□□ -1.75
ATXN3-227ENST00000554491 CSNK1G2P78368 415 aa4.1□□□□□ -1.75
ATXN3-227ENST00000554491 VLDLRP98155 873 aa4.1□□□□□ -1.75
ATXN3-227ENST00000554491 E2F1Q01094 437 aa4.1□□□□□ -1.75
ATXN3-227ENST00000554491 MADCAM1Q13477 382 aa4.1□□□□□ -1.75
ATXN3-227ENST00000554491 IL18R1Q13478 541 aa4.1□□□□□ -1.75
ATXN3-227ENST00000554491 AQP6Q13520 282 aa4.1□□□□□ -1.75
ATXN3-227ENST00000554491 ALCAMQ13740 583 aa4.1□□□□□ -1.75
ATXN3-227ENST00000554491 IL18Q14116 193 aa4.1□□□□□ -1.75
ATXN3-227ENST00000554491 P2RY14Q15391 338 aa4.1□□□□□ -1.75
ATXN3-227ENST00000554491 MED22Q15528 200 aa4.1□□□□□ -1.75
ATXN3-227ENST00000554491 GUCA2BQ16661 112 aa4.1□□□□□ -1.75
ATXN3-227ENST00000554491 DGUOKQ16854 277 aa4.1□□□□□ -1.75
ATXN3-227ENST00000554491 COL28A1Q2UY09 1125 aa4.1□□□□□ -1.75
ATXN3-227ENST00000554491 NDUFAF6Q330K2 333 aa4.1□□□□□ -1.75
ATXN3-227ENST00000554491 SOWAHCQ53LP3 525 aaPredicted RBP4.1□□□□□ -1.75
ATXN3-227ENST00000554491 C9orf64Q5T6V5 341 aa4.1□□□□□ -1.75
ATXN3-227ENST00000554491 N4BP2L1Q5TBK1 243 aaPredicted RBP4.1□□□□□ -1.75
ATXN3-227ENST00000554491 ANKRD22Q5VYY1 191 aa4.1□□□□□ -1.75
ATXN3-227ENST00000554491 METTL7BQ6UX53 244 aa4.1□□□□□ -1.75
ATXN3-227ENST00000554491 CD300LGQ6UXG3 332 aa4.1□□□□□ -1.75
ATXN3-227ENST00000554491 LRRN1Q6UXK5 716 aa4.1□□□□□ -1.75
ATXN3-227ENST00000554491 DLEU7Q6UYE1 221 aa4.1□□□□□ -1.75
ATXN3-227ENST00000554491 CYHR1Q6ZMK1 362 aa4.1□□□□□ -1.75
ATXN3-227ENST00000554491 MRPL52Q86TS9 123 aaKnown RBP4.1□□□□□ -1.75
ATXN3-227ENST00000554491 CYP4Z1Q86W10 505 aa4.1□□□□□ -1.75
ATXN3-227ENST00000554491 KLBQ86Z14 1044 aa4.1□□□□□ -1.75
ATXN3-227ENST00000554491 CCDC60Q8IWA6 550 aaPredicted RBP4.1□□□□□ -1.75
ATXN3-227ENST00000554491 SKA3Q8IX90 412 aa4.1□□□□□ -1.75
ATXN3-227ENST00000554491 SELENOHQ8IZQ5 122 aaKnown RBP4.1□□□□□ -1.75
ATXN3-227ENST00000554491 LGI2Q8N0V4 545 aa4.1□□□□□ -1.75
ATXN3-227ENST00000554491 ZNF444Q8N0Y2 327 aaPredicted RBP4.1□□□□□ -1.75
ATXN3-227ENST00000554491 PRSS35Q8N3Z0 413 aa4.1□□□□□ -1.75
ATXN3-227ENST00000554491 DNAJC22Q8N4W6 341 aa4.1□□□□□ -1.75
ATXN3-227ENST00000554491 ATPAF2Q8N5M1 289 aa4.1□□□□□ -1.75
ATXN3-227ENST00000554491 FAM83FQ8NEG4 500 aaPredicted RBP4.1□□□□□ -1.75
ATXN3-227ENST00000554491 FAM46DQ8NEK8 389 aa4.1□□□□□ -1.75
ATXN3-227ENST00000554491 OR4M1Q8NGD0 313 aa4.1□□□□□ -1.75
ATXN3-227ENST00000554491 OR52J3Q8NH60 311 aa4.1□□□□□ -1.75
ATXN3-227ENST00000554491 SETD6Q8TBK2 473 aa4.1□□□□□ -1.75
ATXN3-227ENST00000554491 WFIKKN2Q8TEU8 576 aa4.1□□□□□ -1.75
ATXN3-227ENST00000554491 GLYATL2Q8WU03 294 aa4.1□□□□□ -1.75
ATXN3-227ENST00000554491 PHF10Q8WUB8 498 aaKnown RBP4.1□□□□□ -1.75
ATXN3-227ENST00000554491 DCAKDQ8WVC6 231 aa4.1□□□□□ -1.75
ATXN3-227ENST00000554491 C10orf82Q8WW14 230 aa4.1□□□□□ -1.75
ATXN3-227ENST00000554491 HTRA1Q92743 480 aa4.1□□□□□ -1.75
ATXN3-227ENST00000554491 MR1Q95460 341 aa4.1□□□□□ -1.75
ATXN3-227ENST00000554491 MYLPFQ96A32 169 aa4.1□□□□□ -1.75
ATXN3-227ENST00000554491 C3orf49Q96BT1 292 aa4.1□□□□□ -1.75
ATXN3-227ENST00000554491 ZNF707Q96C28 371 aaPredicted RBP4.1□□□□□ -1.75
ATXN3-227ENST00000554491 NARS2Q96I59 477 aaKnown RBP4.1□□□□□ -1.75
ATXN3-227ENST00000554491 PACRGQ96M98 296 aaPredicted RBP4.1□□□□□ -1.75
ATXN3-227ENST00000554491 ZNF599Q96NL3 588 aa4.1□□□□□ -1.75
ATXN3-227ENST00000554491 NECTIN4Q96NY8 510 aa4.1□□□□□ -1.75
ATXN3-227ENST00000554491 GCNAQ96QF7 691 aa4.1□□□□□ -1.75
ATXN3-227ENST00000554491 KCNK16Q96T55 309 aa4.1□□□□□ -1.75
ATXN3-227ENST00000554491 MAP3K3Q99759 626 aa4.1□□□□□ -1.75
ATXN3-227ENST00000554491 CPNE1Q99829 537 aa4.1□□□□□ -1.75
ATXN3-227ENST00000554491 IFT27Q9BW83 186 aa4.1□□□□□ -1.75
ATXN3-227ENST00000554491 ST6GALNAC4Q9H4F1 302 aa4.1□□□□□ -1.75
ATXN3-227ENST00000554491 NHEJ1Q9H9Q4 299 aaPredicted RBP4.1□□□□□ -1.75
ATXN3-227ENST00000554491 TBC1D17Q9HA65 648 aa4.1□□□□□ -1.75
ATXN3-227ENST00000554491 C6orf50Q9HD87 102 aa4.1□□□□□ -1.75
ATXN3-227ENST00000554491 IL1RAPQ9NPH3 570 aa4.1□□□□□ -1.75
ATXN3-227ENST00000554491 SLAMF7Q9NQ25 335 aa4.1□□□□□ -1.75
ATXN3-227ENST00000554491 ZNF302Q9NR11 478 aa4.1□□□□□ -1.75
ATXN3-227ENST00000554491 TLR8Q9NR97 1041 aaKnown RBP4.1□□□□□ -1.75
ATXN3-227ENST00000554491 IMP3Q9NV31 184 aaKnown RBP4.1□□□□□ -1.75
ATXN3-227ENST00000554491 PLEK2Q9NYT0 353 aa4.1□□□□□ -1.75
ATXN3-227ENST00000554491 MED11Q9P086 117 aa4.1□□□□□ -1.75
ATXN3-227ENST00000554491 ZNF639Q9UID6 485 aa4.1□□□□□ -1.75
ATXN3-227ENST00000554491 LOC400499M0QZD8 3231 aa4.1□□□□□ -1.75
ATXN3-227ENST00000554491 DSPP15924 2871 aaKnown RBP4.1□□□□□ -1.75
ATXN3-227ENST00000554491 NBEAQ8NFP9 2946 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 hCG_1809904A0A1W2PP81 198 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 A0A1W2PPE2 198 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 A0A1W2PR64 198 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 SAC3D1A6NKF1 404 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 ERI2A8K979 691 aaKnown RBP4.09□□□□□ -1.75
ATXN3-227ENST00000554491 BTNL10A8MVZ5 291 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 FAM86B1E9PN63 330 aa4.09□□□□□ -1.75
ATXN3-227ENST00000554491 POC1B-GALNT4F8VUJ3 575 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms