RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 VAPAQ9P0L0 249 aa5.82□□□□□ -1.48
SCFD1-212ENST00000554486 CORO2BQ9UQ03 480 aa5.82□□□□□ -1.48
SCFD1-212ENST00000554486 PADI2Q9Y2J8 665 aa5.82□□□□□ -1.48
SCFD1-212ENST00000554486 HS3ST3B1Q9Y662 390 aa5.82□□□□□ -1.48
SCFD1-212ENST00000554486 ANKRD11Q6UB99 2663 aaPredicted RBP5.81□□□□□ -1.48
SCFD1-212ENST00000554486 CNTRLQ7Z7A1 2325 aa5.81□□□□□ -1.48
SCFD1-212ENST00000554486 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.81□□□□□ -1.48
SCFD1-212ENST00000554486 A0A087WV62 115 aa5.81□□□□□ -1.48
SCFD1-212ENST00000554486 IGHV1-45A0A0A0MS14 117 aa5.81□□□□□ -1.48
SCFD1-212ENST00000554486 RNF103-CHMP3A0A140T963 221 aa5.81□□□□□ -1.48
SCFD1-212ENST00000554486 A0A1W2PQ72 361 aa5.81□□□□□ -1.48
SCFD1-212ENST00000554486 SYNDIG1LA6NDD5 238 aa5.81□□□□□ -1.48
SCFD1-212ENST00000554486 SAGE2PA6NJ88 616 aa5.81□□□□□ -1.48
SCFD1-212ENST00000554486 C17orf105B2RV13 164 aa5.81□□□□□ -1.48
SCFD1-212ENST00000554486 UPK1AO00322 258 aa5.81□□□□□ -1.48
SCFD1-212ENST00000554486 EMC8O43402 210 aa5.81□□□□□ -1.48
SCFD1-212ENST00000554486 PLOD3O60568 738 aa5.81□□□□□ -1.48
SCFD1-212ENST00000554486 NME6O75414 186 aaPredicted RBP5.81□□□□□ -1.48
SCFD1-212ENST00000554486 CREG1O75629 220 aa5.81□□□□□ -1.48
SCFD1-212ENST00000554486 PSMG1O95456 288 aa5.81□□□□□ -1.48
SCFD1-212ENST00000554486 IGHEP01854 428 aa5.81□□□□□ -1.48
SCFD1-212ENST00000554486 CLPSP04118 112 aa5.81□□□□□ -1.48
SCFD1-212ENST00000554486 IGKV3-11P04433 115 aa5.81□□□□□ -1.48
SCFD1-212ENST00000554486 KRT16P08779 473 aa5.81□□□□□ -1.48
SCFD1-212ENST00000554486 IFI6P09912 130 aa5.81□□□□□ -1.48
SCFD1-212ENST00000554486 UQCRC2P22695 453 aa5.81□□□□□ -1.48
SCFD1-212ENST00000554486 OTX2P32243 289 aa5.81□□□□□ -1.48
SCFD1-212ENST00000554486 SOAT1P35610 550 aa5.81□□□□□ -1.48
SCFD1-212ENST00000554486 CCT3P49368 545 aaKnown RBP5.81□□□□□ -1.48
SCFD1-212ENST00000554486 NUDT2P50583 147 aa5.81□□□□□ -1.48
SCFD1-212ENST00000554486 GPR143P51810 404 aa5.81□□□□□ -1.48
SCFD1-212ENST00000554486 PGDP52209 483 aa5.81□□□□□ -1.48
SCFD1-212ENST00000554486 NCALDP61601 193 aa5.81□□□□□ -1.48
SCFD1-212ENST00000554486 EEF1A2Q05639 463 aaKnown RBP5.81□□□□□ -1.48
SCFD1-212ENST00000554486 FUT7Q11130 342 aa5.81□□□□□ -1.48
SCFD1-212ENST00000554486 SELPLGQ14242 412 aa5.81□□□□□ -1.48
SCFD1-212ENST00000554486 CAPRIN1Q14444 709 aaKnown RBP5.81□□□□□ -1.48
SCFD1-212ENST00000554486 EXOSC7Q15024 291 aaKnown RBP5.81□□□□□ -1.48
SCFD1-212ENST00000554486 RUNDC3AQ59EK9 446 aa5.81□□□□□ -1.48
SCFD1-212ENST00000554486 SAXO2Q658L1 398 aa5.81□□□□□ -1.48
SCFD1-212ENST00000554486 PAPD4Q6PIY7 484 aaKnown RBP5.81□□□□□ -1.48
SCFD1-212ENST00000554486 TMEM64Q6YI46 380 aa5.81□□□□□ -1.48
SCFD1-212ENST00000554486 OR2L13Q8N349 312 aa5.81□□□□□ -1.48
SCFD1-212ENST00000554486 ZNF321PQ8N8H1 164 aa5.81□□□□□ -1.48
SCFD1-212ENST00000554486 ZNF615Q8N8J6 731 aa5.81□□□□□ -1.48
SCFD1-212ENST00000554486 RBM15BQ8NDT2 890 aaKnown RBP5.81□□□□□ -1.48
SCFD1-212ENST00000554486 C7orf57Q8NEG2 295 aa5.81□□□□□ -1.48
SCFD1-212ENST00000554486 OR11G2Q8NGC1 345 aa5.81□□□□□ -1.48
SCFD1-212ENST00000554486 OR5AK3PQ8NH89 298 aa5.81□□□□□ -1.48
SCFD1-212ENST00000554486 SLC2A12Q8TD20 617 aa5.81□□□□□ -1.48
SCFD1-212ENST00000554486 SFXN5Q8TD22 340 aa5.81□□□□□ -1.48
SCFD1-212ENST00000554486 ZNF721Q8TF20 911 aa5.81□□□□□ -1.48
SCFD1-212ENST00000554486 ZFP90Q8TF47 636 aa5.81□□□□□ -1.48
SCFD1-212ENST00000554486 METTL21AQ8WXB1 218 aa5.81□□□□□ -1.48
SCFD1-212ENST00000554486 ASB10Q8WXI3 467 aa5.81□□□□□ -1.48
SCFD1-212ENST00000554486 FGF11Q92914 225 aa5.81□□□□□ -1.48
SCFD1-212ENST00000554486 RIT1Q92963 219 aa5.81□□□□□ -1.48
SCFD1-212ENST00000554486 ROPN1LQ96C74 230 aa5.81□□□□□ -1.48
SCFD1-212ENST00000554486 LRRC58Q96CX6 371 aa5.81□□□□□ -1.48
SCFD1-212ENST00000554486 NEURL3Q96EH8 262 aa5.81□□□□□ -1.48
SCFD1-212ENST00000554486 FAM120BQ96EK7 910 aaKnown RBP5.81□□□□□ -1.48
SCFD1-212ENST00000554486 GIMAP5Q96F15 307 aa5.81□□□□□ -1.48
SCFD1-212ENST00000554486 RBM18Q96H35 190 aaKnown RBP5.81□□□□□ -1.48
SCFD1-212ENST00000554486 SENP5Q96HI0 755 aaPredicted RBP5.81□□□□□ -1.48
SCFD1-212ENST00000554486 NAF1Q96HR8 494 aaKnown RBP5.81□□□□□ -1.48
SCFD1-212ENST00000554486 MAGED4Q96JG8 741 aa5.81□□□□□ -1.48
SCFD1-212ENST00000554486 IMMP1LQ96LU5 166 aa5.81□□□□□ -1.48
SCFD1-212ENST00000554486 ANKRD27Q96NW4 1050 aa5.81□□□□□ -1.48
SCFD1-212ENST00000554486 CGREF1Q99674 301 aa5.81□□□□□ -1.48
SCFD1-212ENST00000554486 SLC35A5Q9BS91 424 aa5.81□□□□□ -1.48
SCFD1-212ENST00000554486 TUBB6Q9BUF5 446 aa5.81□□□□□ -1.48
SCFD1-212ENST00000554486 NUDT9Q9BW91 350 aa5.81□□□□□ -1.48
SCFD1-212ENST00000554486 KRTAP9-8Q9BYQ0 159 aa5.81□□□□□ -1.48
SCFD1-212ENST00000554486 SERHL2Q9H4I8 314 aa5.81□□□□□ -1.48
SCFD1-212ENST00000554486 IKZF5Q9H5V7 419 aa5.81□□□□□ -1.48
SCFD1-212ENST00000554486 GPN2Q9H9Y4 310 aaPredicted RBP5.81□□□□□ -1.48
SCFD1-212ENST00000554486 GALNT9Q9HCQ5 603 aa5.81□□□□□ -1.48
SCFD1-212ENST00000554486 GID8Q9NWU2 228 aa5.81□□□□□ -1.48
SCFD1-212ENST00000554486 TAS2R1Q9NYW7 299 aa5.81□□□□□ -1.48
SCFD1-212ENST00000554486 PTGFRNQ9P2B2 879 aa5.81□□□□□ -1.48
SCFD1-212ENST00000554486 DKK4Q9UBT3 224 aa5.81□□□□□ -1.48
SCFD1-212ENST00000554486 KCND3Q9UK17 655 aa5.81□□□□□ -1.48
SCFD1-212ENST00000554486 ING1Q9UK53 422 aaPredicted RBP5.81□□□□□ -1.48
SCFD1-212ENST00000554486 VPS4AQ9UN37 437 aa5.81□□□□□ -1.48
SCFD1-212ENST00000554486 PCDHGB4Q9UN71 923 aa5.81□□□□□ -1.48
SCFD1-212ENST00000554486 PPIEQ9UNP9 301 aaKnown RBP5.81□□□□□ -1.48
SCFD1-212ENST00000554486 C19orf53Q9UNZ5 99 aaPredicted RBP5.81□□□□□ -1.48
SCFD1-212ENST00000554486 ERVK-19Q9WJR5 959 aa5.81□□□□□ -1.48
SCFD1-212ENST00000554486 SNX8Q9Y5X2 465 aa5.81□□□□□ -1.48
SCFD1-212ENST00000554486 GMEB1Q9Y692 573 aa5.81□□□□□ -1.48
SCFD1-212ENST00000554486 ZFHX4Q86UP3 3567 aa5.8□□□□□ -1.48
SCFD1-212ENST00000554486 CFAP47Q6ZTR5 3102 aa5.8□□□□□ -1.48
SCFD1-212ENST00000554486 MED19A0JLT2 244 aaPredicted RBP5.8□□□□□ -1.48
SCFD1-212ENST00000554486 MASP2O00187 686 aa5.8□□□□□ -1.48
SCFD1-212ENST00000554486 CLIC1O00299 241 aa5.8□□□□□ -1.48
SCFD1-212ENST00000554486 PCDH17O14917 1159 aa5.8□□□□□ -1.48
SCFD1-212ENST00000554486 SUV39H1O43463 412 aa5.8□□□□□ -1.48
SCFD1-212ENST00000554486 RRP9O43818 475 aaKnown RBP5.8□□□□□ -1.48
SCFD1-212ENST00000554486 ANP32DO95626 131 aa5.8□□□□□ -1.48
SCFD1-212ENST00000554486 NPPAP01160 153 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms