RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 RGS9BPQ6ZS82 235 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 IL17RELQ6ZVW7 336 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 USP43Q70EL4 1123 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 SDCCAG8Q86SQ7 713 aaPredicted RBP2.81□□□□□ -1.96
SLIRP-202ENST00000553981 HIPK1Q86Z02 1210 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 LACC1Q8IV20 430 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 GPALPP1Q8IXQ4 340 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 ZNF595Q8IYB9 648 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 ACOT4Q8N9L9 421 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 ZBTB8BQ8NAP8 495 aaPredicted RBP2.81□□□□□ -1.96
SLIRP-202ENST00000553981 BBOF1Q8ND07 529 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 MORN4Q8NDC4 146 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 OR2L5Q8NG80 312 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 OR5M1Q8NGP8 315 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 OR8K3Q8NH51 312 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 B4GALNT2Q8NHY0 566 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 NUBPLQ8TB37 319 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 RDH11Q8TC12 318 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 RNF138Q8WVD3 245 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 SMPDL3BQ92485 455 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 WDR34Q96EX3 536 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 ZC3HAV1LQ96H79 300 aaKnown RBP2.81□□□□□ -1.96
SLIRP-202ENST00000553981 ZNF845Q96IR2 970 aaPredicted RBP2.81□□□□□ -1.96
SLIRP-202ENST00000553981 RILPQ96NA2 401 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 RUNDC3BQ96NL0 473 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 DACH2Q96NX9 599 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 PPP1R2P1Q96PQ5 205 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 NPLQ9BXD5 320 aaPredicted RBP2.81□□□□□ -1.96
SLIRP-202ENST00000553981 MS4A8Q9BY19 250 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 ANGPTL4Q9BY76 406 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 NXF5Q9H1B4 397 aaKnown RBP2.81□□□□□ -1.96
SLIRP-202ENST00000553981 SLCO5A1Q9H2Y9 848 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 OR51B5Q9H339 312 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 EHD1Q9H4M9 534 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 CAB39LQ9H9S4 337 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 UBTD1Q9HAC8 227 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 C20orf96Q9NUD7 363 aaPredicted RBP2.81□□□□□ -1.96
SLIRP-202ENST00000553981 ZNF701Q9NV72 531 aaPredicted RBP2.81□□□□□ -1.96
SLIRP-202ENST00000553981 ARL15Q9NXU5 204 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 RNF14Q9UBS8 474 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 USP22Q9UPT9 525 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 CAMK2AQ9UQM7 478 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 C15orf41Q9Y2V0 281 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 ASB4Q9Y574 426 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 PCDHGB3Q9Y5G1 929 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 IKBKGQ9Y6K9 419 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 FREM1Q5H8C1 2179 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 ALPK2Q86TB3 2170 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 ABCA1O95477 2261 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 TACC2O95359 2948 aa2.81□□□□□ -1.96
SLIRP-202ENST00000553981 IGHV4-30-2A0A087WSY4 118 aa2.8□□□□□ -1.96
SLIRP-202ENST00000553981 A0A0A6YYD5 115 aa2.8□□□□□ -1.96
SLIRP-202ENST00000553981 IGLV5-39A0A0G2JS06 123 aa2.8□□□□□ -1.96
SLIRP-202ENST00000553981 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP2.8□□□□□ -1.96
SLIRP-202ENST00000553981 GOLGA6L9A6NEM1 432 aa2.8□□□□□ -1.96
SLIRP-202ENST00000553981 MIF4GDA9UHW6 222 aaKnown RBP2.8□□□□□ -1.96
SLIRP-202ENST00000553981 PLOD2O00469 737 aa2.8□□□□□ -1.96
SLIRP-202ENST00000553981 PHF1O43189 567 aaPredicted RBP2.8□□□□□ -1.96
SLIRP-202ENST00000553981 ICOSLGO75144 302 aa2.8□□□□□ -1.96
SLIRP-202ENST00000553981 TRAPPC6AO75865 159 aa2.8□□□□□ -1.96
SLIRP-202ENST00000553981 AQP8O94778 261 aa2.8□□□□□ -1.96
SLIRP-202ENST00000553981 WDR47O94967 919 aa2.8□□□□□ -1.96
SLIRP-202ENST00000553981 AIFM1O95831 613 aa2.8□□□□□ -1.96
SLIRP-202ENST00000553981 IGHV4-39P01824 125 aa2.8□□□□□ -1.96
SLIRP-202ENST00000553981 FGGP02679 453 aa2.8□□□□□ -1.96
SLIRP-202ENST00000553981 DANCRP0C864 163 aa2.8□□□□□ -1.96
SLIRP-202ENST00000553981 CD1DP15813 335 aa2.8□□□□□ -1.96
SLIRP-202ENST00000553981 ZNF708P17019 499 aa2.8□□□□□ -1.96
SLIRP-202ENST00000553981 TNNI3P19429 210 aa2.8□□□□□ -1.96
SLIRP-202ENST00000553981 GPX3P22352 226 aa2.8□□□□□ -1.96
SLIRP-202ENST00000553981 HIST1H1TP22492 207 aaPredicted RBP2.8□□□□□ -1.96
SLIRP-202ENST00000553981 MT3P25713 68 aa2.8□□□□□ -1.96
SLIRP-202ENST00000553981 CNTFP26441 200 aa2.8□□□□□ -1.96
SLIRP-202ENST00000553981 BSGP35613 385 aa2.8□□□□□ -1.96
SLIRP-202ENST00000553981 ACVR1BP36896 505 aa2.8□□□□□ -1.96
SLIRP-202ENST00000553981 PPARGP37231 505 aaPredicted RBP2.8□□□□□ -1.96
SLIRP-202ENST00000553981 CASP2P42575 452 aa2.8□□□□□ -1.96
SLIRP-202ENST00000553981 SLC6A8P48029 635 aa2.8□□□□□ -1.96
SLIRP-202ENST00000553981 CPA2P48052 419 aa2.8□□□□□ -1.96
SLIRP-202ENST00000553981 MTTPP55157 894 aa2.8□□□□□ -1.96
SLIRP-202ENST00000553981 CLDN20P56880 219 aa2.8□□□□□ -1.96
SLIRP-202ENST00000553981 RGS1Q08116 209 aa2.8□□□□□ -1.96
SLIRP-202ENST00000553981 KIF5AQ12840 1032 aa2.8□□□□□ -1.96
SLIRP-202ENST00000553981 SLAMF1Q13291 335 aa2.8□□□□□ -1.96
SLIRP-202ENST00000553981 THOC5Q13769 683 aaKnown RBP2.8□□□□□ -1.96
SLIRP-202ENST00000553981 MFSD13AQ14CX5 517 aa2.8□□□□□ -1.96
SLIRP-202ENST00000553981 EXOSC7Q15024 291 aaKnown RBP2.8□□□□□ -1.96
SLIRP-202ENST00000553981 TGFBIQ15582 683 aa2.8□□□□□ -1.96
SLIRP-202ENST00000553981 LTB4RQ15722 352 aa2.8□□□□□ -1.96
SLIRP-202ENST00000553981 PGGHGQ32M88 737 aa2.8□□□□□ -1.96
SLIRP-202ENST00000553981 TTLL9Q3SXZ7 439 aa2.8□□□□□ -1.96
SLIRP-202ENST00000553981 TIGD3Q6B0B8 471 aa2.8□□□□□ -1.96
SLIRP-202ENST00000553981 OR5M10Q6IEU7 315 aa2.8□□□□□ -1.96
SLIRP-202ENST00000553981 OPN5Q6U736 354 aa2.8□□□□□ -1.96
SLIRP-202ENST00000553981 TMIGD1Q6UXZ0 262 aa2.8□□□□□ -1.96
SLIRP-202ENST00000553981 NPSR1Q6W5P4 371 aa2.8□□□□□ -1.96
SLIRP-202ENST00000553981 RPS27LQ71UM5 84 aaKnown RBP2.8□□□□□ -1.96
SLIRP-202ENST00000553981 MAATS1Q7Z4T9 603 aa2.8□□□□□ -1.96
SLIRP-202ENST00000553981 ZC3HC1Q86WB0 502 aaKnown RBP2.8□□□□□ -1.96
SLIRP-202ENST00000553981 EID3Q8N140 333 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms