RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 RIPK1Q13546 671 aa13.27□□□□□ -0.29
SHMT2-210ENST00000553950 CBFBQ13951 182 aa13.27□□□□□ -0.29
SHMT2-210ENST00000553950 GANABQ14697 944 aaKnown RBP13.27□□□□□ -0.29
SHMT2-210ENST00000553950 FAM86B1Q8N7N1 296 aa13.27□□□□□ -0.29
SHMT2-210ENST00000553950 FAM98AQ8NCA5 519 aaKnown RBP13.27□□□□□ -0.29
SHMT2-210ENST00000553950 B4GALNT2Q8NHY0 566 aa13.27□□□□□ -0.29
SHMT2-210ENST00000553950 PYDC1Q8WXC3 89 aa13.27□□□□□ -0.29
SHMT2-210ENST00000553950 ZG16BQ96DA0 208 aa13.27□□□□□ -0.29
SHMT2-210ENST00000553950 FRMD6Q96NE9 622 aa13.27□□□□□ -0.29
SHMT2-210ENST00000553950 ZNF559Q9BR84 538 aa13.27□□□□□ -0.29
SHMT2-210ENST00000553950 PTGES2Q9H7Z7 377 aa13.27□□□□□ -0.29
SHMT2-210ENST00000553950 S100A14Q9HCY8 104 aa13.27□□□□□ -0.29
SHMT2-210ENST00000553950 FLRT3Q9NZU0 649 aa13.27□□□□□ -0.29
SHMT2-210ENST00000553950 SELENONQ9NZV5 590 aa13.27□□□□□ -0.29
SHMT2-210ENST00000553950 C6orf203Q9P0P8 240 aaPredicted RBP13.27□□□□□ -0.29
SHMT2-210ENST00000553950 PCDHGB6Q9Y5F9 930 aa13.27□□□□□ -0.29
SHMT2-210ENST00000553950 ENPP4Q9Y6X5 453 aa13.27□□□□□ -0.29
SHMT2-210ENST00000553950 M0R3H8 397 aa13.26□□□□□ -0.29
SHMT2-210ENST00000553950 SNPHO15079 494 aa13.26□□□□□ -0.29
SHMT2-210ENST00000553950 TPST1O60507 370 aa13.26□□□□□ -0.29
SHMT2-210ENST00000553950 DPM1O60762 260 aa13.26□□□□□ -0.29
SHMT2-210ENST00000553950 CCL3P10147 92 aa13.26□□□□□ -0.29
SHMT2-210ENST00000553950 THRBP10828 461 aa13.26□□□□□ -0.29
SHMT2-210ENST00000553950 IGF2RP11717 2491 aa13.26□□□□□ -0.29
SHMT2-210ENST00000553950 CD96P40200 585 aa13.26□□□□□ -0.29
SHMT2-210ENST00000553950 ERFP50548 548 aa13.26□□□□□ -0.29
SHMT2-210ENST00000553950 CCR4P51679 360 aa13.26□□□□□ -0.29
SHMT2-210ENST00000553950 CXADRP78310 365 aa13.26□□□□□ -0.29
SHMT2-210ENST00000553950 RAPSNQ13702 412 aa13.26□□□□□ -0.29
SHMT2-210ENST00000553950 RCN1Q15293 331 aa13.26□□□□□ -0.29
SHMT2-210ENST00000553950 CD226Q15762 336 aa13.26□□□□□ -0.29
SHMT2-210ENST00000553950 SWT1Q5T5J6 900 aaKnown RBP13.26□□□□□ -0.29
SHMT2-210ENST00000553950 IGFL3Q6UXB1 125 aa13.26□□□□□ -0.29
SHMT2-210ENST00000553950 DEF8Q6ZN54 512 aa13.26□□□□□ -0.29
SHMT2-210ENST00000553950 PLEKHM3Q6ZWE6 761 aa13.26□□□□□ -0.29
SHMT2-210ENST00000553950 HMGN2P46Q86SG4 172 aa13.26□□□□□ -0.29
SHMT2-210ENST00000553950 MARCH3Q86UD3 253 aa13.26□□□□□ -0.29
SHMT2-210ENST00000553950 ZADH2Q8N4Q0 377 aa13.26□□□□□ -0.29
SHMT2-210ENST00000553950 GATSQ8NAP1 163 aa13.26□□□□□ -0.29
SHMT2-210ENST00000553950 MDS2Q8NDY4 140 aa13.26□□□□□ -0.29
SHMT2-210ENST00000553950 OR4K17Q8NGC6 315 aa13.26□□□□□ -0.29
SHMT2-210ENST00000553950 VANGL1Q8TAA9 524 aaPredicted RBP13.26□□□□□ -0.29
SHMT2-210ENST00000553950 TMEM234Q8WY98 164 aa13.26□□□□□ -0.29
SHMT2-210ENST00000553950 ARSGQ96EG1 525 aa13.26□□□□□ -0.29
SHMT2-210ENST00000553950 ZNF300Q96RE9 604 aaPredicted RBP13.26□□□□□ -0.29
SHMT2-210ENST00000553950 FAM173AQ9BQD7 235 aa13.26□□□□□ -0.29
SHMT2-210ENST00000553950 CHID1Q9BWS9 393 aa13.26□□□□□ -0.29
SHMT2-210ENST00000553950 TRIM2Q9C040 744 aa13.26□□□□□ -0.29
SHMT2-210ENST00000553950 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.26□□□□□ -0.29
SHMT2-210ENST00000553950 ANKRD19PQ9H560 264 aa13.26□□□□□ -0.29
SHMT2-210ENST00000553950 B4GALT7Q9UBV7 327 aa13.26□□□□□ -0.29
SHMT2-210ENST00000553950 TUBD1Q9UJT1 453 aa13.26□□□□□ -0.29
SHMT2-210ENST00000553950 FREM2Q5SZK8 3169 aa13.25□□□□□ -0.29
SHMT2-210ENST00000553950 TRAV17A0A0B4J275 112 aa13.25□□□□□ -0.29
SHMT2-210ENST00000553950 ANKUB1A6NFN9 424 aa13.25□□□□□ -0.29
SHMT2-210ENST00000553950 TMEM229AB2RXF0 380 aa13.25□□□□□ -0.29
SHMT2-210ENST00000553950 MGRN1O60291 552 aa13.25□□□□□ -0.29
SHMT2-210ENST00000553950 NME2P1O60361 137 aa13.25□□□□□ -0.29
SHMT2-210ENST00000553950 CYP7B1O75881 506 aa13.25□□□□□ -0.29
SHMT2-210ENST00000553950 NEURL1O76050 574 aa13.25□□□□□ -0.29
SHMT2-210ENST00000553950 OR5F1O95221 314 aa13.25□□□□□ -0.29
SHMT2-210ENST00000553950 LDLRP01130 860 aa13.25□□□□□ -0.29
SHMT2-210ENST00000553950 LINGO3P0C6S8 592 aa13.25□□□□□ -0.29
SHMT2-210ENST00000553950 NME2P22392 152 aa13.25□□□□□ -0.29
SHMT2-210ENST00000553950 ITPKBP27987 946 aa13.25□□□□□ -0.29
SHMT2-210ENST00000553950 ZNF41P51814 821 aaPredicted RBP13.25□□□□□ -0.29
SHMT2-210ENST00000553950 GAS1P54826 345 aa13.25□□□□□ -0.29
SHMT2-210ENST00000553950 TAS2R41P59536 307 aa13.25□□□□□ -0.29
SHMT2-210ENST00000553950 VLDLRP98155 873 aa13.25□□□□□ -0.29
SHMT2-210ENST00000553950 ZNF117Q03924 483 aa13.25□□□□□ -0.29
SHMT2-210ENST00000553950 EPS8Q12929 822 aa13.25□□□□□ -0.29
SHMT2-210ENST00000553950 GLIPR1L2Q4G1C9 344 aa13.25□□□□□ -0.29
SHMT2-210ENST00000553950 ZNF468Q5VIY5 522 aaPredicted RBP13.25□□□□□ -0.29
SHMT2-210ENST00000553950 PRAMEF20Q5VT98 475 aa13.25□□□□□ -0.29
SHMT2-210ENST00000553950 ZNF613Q6PF04 617 aa13.25□□□□□ -0.29
SHMT2-210ENST00000553950 APOOLQ6UXV4 268 aa13.25□□□□□ -0.29
SHMT2-210ENST00000553950 OFCC1Q8IZS5 231 aa13.25□□□□□ -0.29
SHMT2-210ENST00000553950 CLIP4Q8N3C7 705 aa13.25□□□□□ -0.29
SHMT2-210ENST00000553950 AMER2Q8N7J2 671 aa13.25□□□□□ -0.29
SHMT2-210ENST00000553950 PIK3C3Q8NEB9 887 aa13.25□□□□□ -0.29
SHMT2-210ENST00000553950 OR6T1Q8NGN1 323 aa13.25□□□□□ -0.29
SHMT2-210ENST00000553950 OR5W2Q8NH69 310 aa13.25□□□□□ -0.29
SHMT2-210ENST00000553950 CNOT9Q92600 299 aaKnown RBP13.25□□□□□ -0.29
SHMT2-210ENST00000553950 C7orf34Q96L11 122 aa13.25□□□□□ -0.29
SHMT2-210ENST00000553950 MCHR1Q99705 422 aa13.25□□□□□ -0.29
SHMT2-210ENST00000553950 PIP5K1AQ99755 562 aa13.25□□□□□ -0.29
SHMT2-210ENST00000553950 BDH2Q9BUT1 245 aa13.25□□□□□ -0.29
SHMT2-210ENST00000553950 RASSF4Q9H2L5 321 aa13.25□□□□□ -0.29
SHMT2-210ENST00000553950 ADNPQ9H2P0 1102 aa13.25□□□□□ -0.29
SHMT2-210ENST00000553950 RNPEPL1Q9HAU8 725 aa13.25□□□□□ -0.29
SHMT2-210ENST00000553950 TMEM27Q9HBJ8 222 aa13.25□□□□□ -0.29
SHMT2-210ENST00000553950 RLIMQ9NVW2 624 aa13.25□□□□□ -0.29
SHMT2-210ENST00000553950 ANKRD10Q9NXR5 420 aa13.25□□□□□ -0.29
SHMT2-210ENST00000553950 RPS6KB2Q9UBS0 482 aa13.25□□□□□ -0.29
SHMT2-210ENST00000553950 DNAJB9Q9UBS3 223 aa13.25□□□□□ -0.29
SHMT2-210ENST00000553950 CARD8Q9Y2G2 431 aa13.25□□□□□ -0.29
SHMT2-210ENST00000553950 CHST2Q9Y4C5 530 aa13.25□□□□□ -0.29
SHMT2-210ENST00000553950 CNTRLQ7Z7A1 2325 aa13.25□□□□□ -0.29
SHMT2-210ENST00000553950 TNRC6AQ8NDV7 1962 aaKnown RBP13.25□□□□□ -0.29
SHMT2-210ENST00000553950 A0A087WZY1 265 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms