RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 FADS1O60427 444 aa7.58□□□□□ -1.2
PSEN1-209ENST00000553855 STX11O75558 287 aa7.58□□□□□ -1.2
PSEN1-209ENST00000553855 OXSR1O95747 527 aaPredicted RBP7.58□□□□□ -1.2
PSEN1-209ENST00000553855 NUDT14O95848 222 aa7.58□□□□□ -1.2
PSEN1-209ENST00000553855 NGFRP08138 427 aa7.58□□□□□ -1.2
PSEN1-209ENST00000553855 OR12D1P0DN82 309 aa7.58□□□□□ -1.2
PSEN1-209ENST00000553855 HK1P19367 917 aa7.58□□□□□ -1.2
PSEN1-209ENST00000553855 AGAP20933 346 aa7.58□□□□□ -1.2
PSEN1-209ENST00000553855 CD247P20963 164 aa7.58□□□□□ -1.2
PSEN1-209ENST00000553855 TBXA2RP21731 343 aa7.58□□□□□ -1.2
PSEN1-209ENST00000553855 DCTP40126 519 aa7.58□□□□□ -1.2
PSEN1-209ENST00000553855 MAP3K8P41279 467 aa7.58□□□□□ -1.2
PSEN1-209ENST00000553855 MAGEA8P43361 318 aa7.58□□□□□ -1.2
PSEN1-209ENST00000553855 ATP12AP54707 1039 aa7.58□□□□□ -1.2
PSEN1-209ENST00000553855 WNT3P56703 355 aa7.58□□□□□ -1.2
PSEN1-209ENST00000553855 EEFSECP57772 596 aaKnown RBP7.58□□□□□ -1.2
PSEN1-209ENST00000553855 SUMO1P63165 101 aaKnown RBP7.58□□□□□ -1.2
PSEN1-209ENST00000553855 GNA13Q14344 377 aa7.58□□□□□ -1.2
PSEN1-209ENST00000553855 SQLEQ14534 574 aa7.58□□□□□ -1.2
PSEN1-209ENST00000553855 ZNF630Q2M218 657 aaPredicted RBP7.58□□□□□ -1.2
PSEN1-209ENST00000553855 GRAMD1BQ3KR37 738 aa7.58□□□□□ -1.2
PSEN1-209ENST00000553855 TIGD2Q4W5G0 525 aa7.58□□□□□ -1.2
PSEN1-209ENST00000553855 GPAT3Q53EU6 434 aa7.58□□□□□ -1.2
PSEN1-209ENST00000553855 EIPR1Q53HC9 387 aa7.58□□□□□ -1.2
PSEN1-209ENST00000553855 CCNJQ5T5M9 372 aa7.58□□□□□ -1.2
PSEN1-209ENST00000553855 C1orf185Q5T7R7 199 aa7.58□□□□□ -1.2
PSEN1-209ENST00000553855 CLEC18BQ6UXF7 455 aa7.58□□□□□ -1.2
PSEN1-209ENST00000553855 C3P1Q6ZMU1 363 aa7.58□□□□□ -1.2
PSEN1-209ENST00000553855 MAMDC2Q7Z304 686 aaPredicted RBP7.58□□□□□ -1.2
PSEN1-209ENST00000553855 MTERF4Q7Z6M4 381 aaKnown RBP7.58□□□□□ -1.2
PSEN1-209ENST00000553855 WDSUB1Q8N9V3 476 aa7.58□□□□□ -1.2
PSEN1-209ENST00000553855 CLEC18CQ8NCF0 446 aa7.58□□□□□ -1.2
PSEN1-209ENST00000553855 OR5D16Q8NGK9 328 aa7.58□□□□□ -1.2
PSEN1-209ENST00000553855 GOT1L1Q8NHS2 421 aaPredicted RBP7.58□□□□□ -1.2
PSEN1-209ENST00000553855 FAM110BQ8TC76 370 aa7.58□□□□□ -1.2
PSEN1-209ENST00000553855 PHOSPHO1Q8TCT1 267 aa7.58□□□□□ -1.2
PSEN1-209ENST00000553855 CA5BP1Q8WTZ4 195 aa7.58□□□□□ -1.2
PSEN1-209ENST00000553855 HOXB13Q92826 284 aaPredicted RBP7.58□□□□□ -1.2
PSEN1-209ENST00000553855 NEURL3Q96EH8 262 aa7.58□□□□□ -1.2
PSEN1-209ENST00000553855 LRRC46Q96FV0 321 aa7.58□□□□□ -1.2
PSEN1-209ENST00000553855 CCDC120Q96HB5 630 aa7.58□□□□□ -1.2
PSEN1-209ENST00000553855 CLUHP3Q96NS8 147 aa7.58□□□□□ -1.2
PSEN1-209ENST00000553855 PIGQQ9BRB3 760 aa7.58□□□□□ -1.2
PSEN1-209ENST00000553855 OR2B2Q9GZK3 357 aa7.58□□□□□ -1.2
PSEN1-209ENST00000553855 OR51I1Q9H343 314 aa7.58□□□□□ -1.2
PSEN1-209ENST00000553855 UBQLN3Q9H347 655 aa7.58□□□□□ -1.2
PSEN1-209ENST00000553855 POLE3Q9NRF9 147 aa7.58□□□□□ -1.2
PSEN1-209ENST00000553855 PNPLA3Q9NST1 481 aa7.58□□□□□ -1.2
PSEN1-209ENST00000553855 GPATCH2Q9NW75 528 aa7.58□□□□□ -1.2
PSEN1-209ENST00000553855 TMEM45AQ9NWC5 275 aa7.58□□□□□ -1.2
PSEN1-209ENST00000553855 ZNF446Q9NWS9 450 aa7.58□□□□□ -1.2
PSEN1-209ENST00000553855 THUMPD1Q9NXG2 353 aaKnown RBP7.58□□□□□ -1.2
PSEN1-209ENST00000553855 MED11Q9P086 117 aa7.58□□□□□ -1.2
PSEN1-209ENST00000553855 LIPT1Q9Y234 373 aa7.58□□□□□ -1.2
PSEN1-209ENST00000553855 SLC6A5Q9Y345 797 aa7.58□□□□□ -1.2
PSEN1-209ENST00000553855 MRPS18CQ9Y3D5 142 aaKnown RBP7.58□□□□□ -1.2
PSEN1-209ENST00000553855 BSNQ9UPA5 3926 aa7.58□□□□□ -1.2
PSEN1-209ENST00000553855 CROCCQ5TZA2 2017 aa7.57□□□□□ -1.2
PSEN1-209ENST00000553855 SHANK1Q9Y566 2161 aa7.57□□□□□ -1.2
PSEN1-209ENST00000553855 ESPL1Q14674 2120 aa7.57□□□□□ -1.2
PSEN1-209ENST00000553855 A0A087WZY1 265 aa7.57□□□□□ -1.2
PSEN1-209ENST00000553855 A0A1W2PQD3 144 aa7.57□□□□□ -1.2
PSEN1-209ENST00000553855 PRSS44E7EML9 344 aa7.57□□□□□ -1.2
PSEN1-209ENST00000553855 H0Y3Z8 333 aa7.57□□□□□ -1.2
PSEN1-209ENST00000553855 NR5A2O00482 541 aa7.57□□□□□ -1.2
PSEN1-209ENST00000553855 ZNF195O14628 629 aa7.57□□□□□ -1.2
PSEN1-209ENST00000553855 ZNHIT1O43257 154 aa7.57□□□□□ -1.2
PSEN1-209ENST00000553855 PRODHO43272 600 aa7.57□□□□□ -1.2
PSEN1-209ENST00000553855 HCRTR2O43614 444 aa7.57□□□□□ -1.2
PSEN1-209ENST00000553855 GMFGO60234 142 aa7.57□□□□□ -1.2
PSEN1-209ENST00000553855 SCN2BO60939 215 aa7.57□□□□□ -1.2
PSEN1-209ENST00000553855 WISP2O76076 250 aa7.57□□□□□ -1.2
PSEN1-209ENST00000553855 IGKV1D-16P01601 117 aa7.57□□□□□ -1.2
PSEN1-209ENST00000553855 GSNP06396 782 aa7.57□□□□□ -1.2
PSEN1-209ENST00000553855 NR2F1P10589 423 aa7.57□□□□□ -1.2
PSEN1-209ENST00000553855 PEPDP12955 493 aa7.57□□□□□ -1.2
PSEN1-209ENST00000553855 GP1BBP13224 206 aa7.57□□□□□ -1.2
PSEN1-209ENST00000553855 POU3F2P20265 443 aaPredicted RBP7.57□□□□□ -1.2
PSEN1-209ENST00000553855 TCEA1P23193 301 aaKnown RBP7.57□□□□□ -1.2
PSEN1-209ENST00000553855 PPIBP23284 216 aaKnown RBP7.57□□□□□ -1.2
PSEN1-209ENST00000553855 ME2P23368 584 aa7.57□□□□□ -1.2
PSEN1-209ENST00000553855 CHMP24386 653 aa7.57□□□□□ -1.2
PSEN1-209ENST00000553855 PTGDSP41222 190 aa7.57□□□□□ -1.2
PSEN1-209ENST00000553855 CRATP43155 626 aa7.57□□□□□ -1.2
PSEN1-209ENST00000553855 ATP4BP51164 291 aa7.57□□□□□ -1.2
PSEN1-209ENST00000553855 ARFIP2P53365 341 aa7.57□□□□□ -1.2
PSEN1-209ENST00000553855 SRSF1Q07955 248 aaKnown RBP eCLIP7.57□□□□□ -1.2
PSEN1-209ENST00000553855 GPR68Q15743 365 aa7.57□□□□□ -1.2
PSEN1-209ENST00000553855 GLYR1Q49A26 553 aaPredicted RBP7.57□□□□□ -1.2
PSEN1-209ENST00000553855 AGKQ53H12 422 aa7.57□□□□□ -1.2
PSEN1-209ENST00000553855 NHSL2Q5HYW2 709 aa7.57□□□□□ -1.2
PSEN1-209ENST00000553855 PDSS1Q5T2R2 415 aa7.57□□□□□ -1.2
PSEN1-209ENST00000553855 FNDC7Q5VTL7 733 aa7.57□□□□□ -1.2
PSEN1-209ENST00000553855 METTL21CQ5VZV1 264 aa7.57□□□□□ -1.2
PSEN1-209ENST00000553855 SAXO2Q658L1 398 aa7.57□□□□□ -1.2
PSEN1-209ENST00000553855 VASNQ6EMK4 673 aa7.57□□□□□ -1.2
PSEN1-209ENST00000553855 TNFAIP8L2Q6P589 184 aaPredicted RBP7.57□□□□□ -1.2
PSEN1-209ENST00000553855 MAVSQ7Z434 540 aa7.57□□□□□ -1.2
PSEN1-209ENST00000553855 P4HA3Q7Z4N8 544 aa7.57□□□□□ -1.2
PSEN1-209ENST00000553855 GALNT10Q86SR1 603 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms