RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 PLSCR2Q9NRY7 297 aa12.59□□□□□ -0.39
TUBB3-202ENST00000553656 KCNE5Q9UJ90 142 aa12.59□□□□□ -0.39
TUBB3-202ENST00000553656 IFT52Q9Y366 437 aa12.59□□□□□ -0.39
TUBB3-202ENST00000553656 HRH3Q9Y5N1 445 aa12.59□□□□□ -0.39
TUBB3-202ENST00000553656 LIPGQ9Y5X9 500 aa12.59□□□□□ -0.39
TUBB3-202ENST00000553656 DSPPQ9NZW4 1301 aa12.59□□□□□ -0.39
TUBB3-202ENST00000553656 A0A087WZY1 265 aa12.58□□□□□ -0.4
TUBB3-202ENST00000553656 A0A1B0GVC2 190 aa12.58□□□□□ -0.4
TUBB3-202ENST00000553656 PYCARD-AS1I3L0S3 204 aa12.58□□□□□ -0.4
TUBB3-202ENST00000553656 PRRG2O14669 202 aa12.58□□□□□ -0.4
TUBB3-202ENST00000553656 BCKDKO14874 412 aa12.58□□□□□ -0.4
TUBB3-202ENST00000553656 SLC19A2O60779 497 aa12.58□□□□□ -0.4
TUBB3-202ENST00000553656 SERPINB7O75635 380 aa12.58□□□□□ -0.4
TUBB3-202ENST00000553656 THBS1P07996 1170 aa12.58□□□□□ -0.4
TUBB3-202ENST00000553656 ESRRAP11474 423 aaPredicted RBP12.58□□□□□ -0.4
TUBB3-202ENST00000553656 NID1P14543 1247 aa12.58□□□□□ -0.4
TUBB3-202ENST00000553656 ETS2P15036 469 aa12.58□□□□□ -0.4
TUBB3-202ENST00000553656 RPS4Y1P22090 263 aaKnown RBP12.58□□□□□ -0.4
TUBB3-202ENST00000553656 AQP1P29972 269 aa12.58□□□□□ -0.4
TUBB3-202ENST00000553656 ADH7P40394 386 aa12.58□□□□□ -0.4
TUBB3-202ENST00000553656 P2RX1P51575 399 aa12.58□□□□□ -0.4
TUBB3-202ENST00000553656 KCNJ10P78508 379 aa12.58□□□□□ -0.4
TUBB3-202ENST00000553656 CBFBQ13951 182 aa12.58□□□□□ -0.4
TUBB3-202ENST00000553656 MAPK11Q15759 364 aa12.58□□□□□ -0.4
TUBB3-202ENST00000553656 ZSWIM7Q19AV6 140 aa12.58□□□□□ -0.4
TUBB3-202ENST00000553656 NDUFAF6Q330K2 333 aa12.58□□□□□ -0.4
TUBB3-202ENST00000553656 INTS11Q5TA45 600 aaKnown RBP12.58□□□□□ -0.4
TUBB3-202ENST00000553656 AP1ARQ63HQ0 302 aa12.58□□□□□ -0.4
TUBB3-202ENST00000553656 ERICH5Q6P6B1 374 aa12.58□□□□□ -0.4
TUBB3-202ENST00000553656 NET1Q7Z628 596 aaPredicted RBP12.58□□□□□ -0.4
TUBB3-202ENST00000553656 FITM2Q8N6M3 262 aa12.58□□□□□ -0.4
TUBB3-202ENST00000553656 PRR7Q8TB68 274 aa12.58□□□□□ -0.4
TUBB3-202ENST00000553656 ZG16BQ96DA0 208 aa12.58□□□□□ -0.4
TUBB3-202ENST00000553656 REXO5Q96IC2 774 aaKnown RBP12.58□□□□□ -0.4
TUBB3-202ENST00000553656 LAT2Q9GZY6 243 aa12.58□□□□□ -0.4
TUBB3-202ENST00000553656 PIF1Q9H611 641 aa12.58□□□□□ -0.4
TUBB3-202ENST00000553656 ARL8BQ9NVJ2 186 aa12.58□□□□□ -0.4
TUBB3-202ENST00000553656 NDE1Q9NXR1 346 aa12.58□□□□□ -0.4
TUBB3-202ENST00000553656 SLC13A4Q9UKG4 626 aa12.58□□□□□ -0.4
TUBB3-202ENST00000553656 ACAD8Q9UKU7 415 aa12.58□□□□□ -0.4
TUBB3-202ENST00000553656 OSGIN2Q9Y236 505 aa12.58□□□□□ -0.4
TUBB3-202ENST00000553656 ZNF443Q9Y2A4 671 aaPredicted RBP12.58□□□□□ -0.4
TUBB3-202ENST00000553656 RPH3AQ9Y2J0 694 aaPredicted RBP12.58□□□□□ -0.4
TUBB3-202ENST00000553656 MRPS18CQ9Y3D5 142 aaKnown RBP12.58□□□□□ -0.4
TUBB3-202ENST00000553656 SHANK1Q9Y566 2161 aa12.58□□□□□ -0.4
TUBB3-202ENST00000553656 ZNF462Q96JM2 2506 aa12.57□□□□□ -0.4
TUBB3-202ENST00000553656 PRORSD1PA6NEY8 169 aa12.57□□□□□ -0.4
TUBB3-202ENST00000553656 FAM220BPB1ANY3 271 aa12.57□□□□□ -0.4
TUBB3-202ENST00000553656 NPIPA2E9PIF3 369 aa12.57□□□□□ -0.4
TUBB3-202ENST00000553656 NPIPA3F8WFD2 350 aa12.57□□□□□ -0.4
TUBB3-202ENST00000553656 WISP2O76076 250 aa12.57□□□□□ -0.4
TUBB3-202ENST00000553656 ACTL6AO96019 429 aa12.57□□□□□ -0.4
TUBB3-202ENST00000553656 TPOP07202 933 aa12.57□□□□□ -0.4
TUBB3-202ENST00000553656 UQCRBP14927 111 aa12.57□□□□□ -0.4
TUBB3-202ENST00000553656 PCGF2P35227 344 aa12.57□□□□□ -0.4
TUBB3-202ENST00000553656 UQCRFS1P47985 274 aa12.57□□□□□ -0.4
TUBB3-202ENST00000553656 SLC6A8P48029 635 aa12.57□□□□□ -0.4
TUBB3-202ENST00000553656 SLC7A2P52569 658 aa12.57□□□□□ -0.4
TUBB3-202ENST00000553656 ADRM1Q16186 407 aa12.57□□□□□ -0.4
TUBB3-202ENST00000553656 VMACQ2NL98 169 aa12.57□□□□□ -0.4
TUBB3-202ENST00000553656 ZNF311Q5JNZ3 666 aa12.57□□□□□ -0.4
TUBB3-202ENST00000553656 MRPL2Q5T653 305 aaKnown RBP12.57□□□□□ -0.4
TUBB3-202ENST00000553656 WLSQ5T9L3 541 aa12.57□□□□□ -0.4
TUBB3-202ENST00000553656 CBLN3Q6UW01 205 aa12.57□□□□□ -0.4
TUBB3-202ENST00000553656 ENPP6Q6UWR7 440 aa12.57□□□□□ -0.4
TUBB3-202ENST00000553656 VRK2Q86Y07 508 aa12.57□□□□□ -0.4
TUBB3-202ENST00000553656 PTOV1Q86YD1 416 aa12.57□□□□□ -0.4
TUBB3-202ENST00000553656 ZZZ3Q8IYH5 903 aa12.57□□□□□ -0.4
TUBB3-202ENST00000553656 OR2T12Q8NG77 320 aa12.57□□□□□ -0.4
TUBB3-202ENST00000553656 OR5W2Q8NH69 310 aa12.57□□□□□ -0.4
TUBB3-202ENST00000553656 ZBTB8AQ96BR9 441 aa12.57□□□□□ -0.4
TUBB3-202ENST00000553656 PIGQQ9BRB3 760 aa12.57□□□□□ -0.4
TUBB3-202ENST00000553656 GPATCH1Q9BRR8 931 aaKnown RBP12.57□□□□□ -0.4
TUBB3-202ENST00000553656 SPAG4Q9NPE6 437 aa12.57□□□□□ -0.4
TUBB3-202ENST00000553656 MED17Q9NVC6 651 aa12.57□□□□□ -0.4
TUBB3-202ENST00000553656 VDAC3Q9Y277 283 aa12.57□□□□□ -0.4
TUBB3-202ENST00000553656 SLC6A5Q9Y345 797 aa12.57□□□□□ -0.4
TUBB3-202ENST00000553656 CFAP46Q8IYW2 2715 aa12.57□□□□□ -0.4
TUBB3-202ENST00000553656 TRGV8A0A0C4DH27 118 aa12.56□□□□□ -0.4
TUBB3-202ENST00000553656 CLDN24A6NM45 220 aa12.56□□□□□ -0.4
TUBB3-202ENST00000553656 OIP5O43482 229 aa12.56□□□□□ -0.4
TUBB3-202ENST00000553656 WISP1O95388 367 aa12.56□□□□□ -0.4
TUBB3-202ENST00000553656 PABPC4LP0CB38 370 aaKnown RBP12.56□□□□□ -0.4
TUBB3-202ENST00000553656 PGCP20142 388 aa12.56□□□□□ -0.4
TUBB3-202ENST00000553656 PGM1P36871 562 aa12.56□□□□□ -0.4
TUBB3-202ENST00000553656 EIF1P41567 113 aaKnown RBP12.56□□□□□ -0.4
TUBB3-202ENST00000553656 PSME3P61289 254 aa12.56□□□□□ -0.4
TUBB3-202ENST00000553656 SKP2Q13309 424 aa12.56□□□□□ -0.4
TUBB3-202ENST00000553656 EIF2S3LQ2VIR3 472 aaKnown RBP12.56□□□□□ -0.4
TUBB3-202ENST00000553656 GLYR1Q49A26 553 aaPredicted RBP12.56□□□□□ -0.4
TUBB3-202ENST00000553656 RNF220Q5VTB9 566 aa12.56□□□□□ -0.4
TUBB3-202ENST00000553656 ARSKQ6UWY0 536 aa12.56□□□□□ -0.4
TUBB3-202ENST00000553656 C16orf89Q6UX73 402 aa12.56□□□□□ -0.4
TUBB3-202ENST00000553656 ZNF836Q6ZNA1 936 aa12.56□□□□□ -0.4
TUBB3-202ENST00000553656 TRPM8Q7Z2W7 1104 aa12.56□□□□□ -0.4
TUBB3-202ENST00000553656 PATL1Q86TB9 770 aaKnown RBP12.56□□□□□ -0.4
TUBB3-202ENST00000553656 ARMC8Q8IUR7 673 aa12.56□□□□□ -0.4
TUBB3-202ENST00000553656 SLC15A3Q8IY34 581 aa12.56□□□□□ -0.4
TUBB3-202ENST00000553656 ZNF440Q8IYI8 595 aa12.56□□□□□ -0.4
TUBB3-202ENST00000553656 EID3Q8N140 333 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms