RNA–Protein interactions for RNA: ENST00000552130.6

VPS29-210, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-210ENST00000552130 HDDC2Q7Z4H3 204 aa5.6□□□□□ -1.51
VPS29-210ENST00000552130 ANKRD37Q7Z713 158 aa5.6□□□□□ -1.51
VPS29-210ENST00000552130 LNX2Q8N448 690 aa5.6□□□□□ -1.51
VPS29-210ENST00000552130 CSNK1A1LQ8N752 337 aa5.6□□□□□ -1.51
VPS29-210ENST00000552130 OR52E5Q8NH55 327 aa5.6□□□□□ -1.51
VPS29-210ENST00000552130 TMEM239Q8WW34 195 aa5.6□□□□□ -1.51
VPS29-210ENST00000552130 IRGQQ8WZA9 623 aa5.6□□□□□ -1.51
VPS29-210ENST00000552130 RND1Q92730 232 aa5.6□□□□□ -1.51
VPS29-210ENST00000552130 ESR2Q92731 530 aa5.6□□□□□ -1.51
VPS29-210ENST00000552130 TIMD4Q96H15 378 aa5.6□□□□□ -1.51
VPS29-210ENST00000552130 FAM84BQ96KN1 310 aaPredicted RBP5.6□□□□□ -1.51
VPS29-210ENST00000552130 PPP1R36Q96LQ0 422 aa5.6□□□□□ -1.51
VPS29-210ENST00000552130 JSRP1Q96MG2 331 aaPredicted RBP5.6□□□□□ -1.51
VPS29-210ENST00000552130 NSMCE3Q96MG7 304 aa5.6□□□□□ -1.51
VPS29-210ENST00000552130 MACROD1Q9BQ69 325 aa5.6□□□□□ -1.51
VPS29-210ENST00000552130 ZNF251Q9BRH9 671 aa5.6□□□□□ -1.51
VPS29-210ENST00000552130 MAP1LC3CQ9BXW4 147 aa5.6□□□□□ -1.51
VPS29-210ENST00000552130 FAM49AQ9H0Q0 323 aaPredicted RBP5.6□□□□□ -1.51
VPS29-210ENST00000552130 WDR55Q9H6Y2 383 aaPredicted RBP5.6□□□□□ -1.51
VPS29-210ENST00000552130 VIPAS39Q9H9C1 493 aa5.6□□□□□ -1.51
VPS29-210ENST00000552130 SLC17A5Q9NRA2 495 aa5.6□□□□□ -1.51
VPS29-210ENST00000552130 RNF186Q9NXI6 227 aa5.6□□□□□ -1.51
VPS29-210ENST00000552130 ZNF319Q9P2F9 582 aa5.6□□□□□ -1.51
VPS29-210ENST00000552130 ABCD2Q9UBJ2 740 aa5.6□□□□□ -1.51
VPS29-210ENST00000552130 POLKQ9UBT6 870 aa5.6□□□□□ -1.51
VPS29-210ENST00000552130 TINAGQ9UJW2 476 aa5.6□□□□□ -1.51
VPS29-210ENST00000552130 NPIPA1Q9UND3 350 aa5.6□□□□□ -1.51
VPS29-210ENST00000552130 ST3GAL5Q9UNP4 418 aa5.6□□□□□ -1.51
VPS29-210ENST00000552130 LAMP3Q9UQV4 416 aa5.6□□□□□ -1.51
VPS29-210ENST00000552130 PLLPQ9Y342 182 aa5.6□□□□□ -1.51
VPS29-210ENST00000552130 CGNL1Q0VF96 1302 aa5.59□□□□□ -1.51
VPS29-210ENST00000552130 AK9Q5TCS8 1911 aa5.59□□□□□ -1.51
VPS29-210ENST00000552130 A0A1W2PPV9 198 aa5.59□□□□□ -1.51
VPS29-210ENST00000552130 ERI2A8K979 691 aaKnown RBP5.59□□□□□ -1.51
VPS29-210ENST00000552130 PRR32B1ATL7 298 aa5.59□□□□□ -1.51
VPS29-210ENST00000552130 BTBD19C9JJ37 291 aa5.59□□□□□ -1.51
VPS29-210ENST00000552130 E7EWF7 191 aa5.59□□□□□ -1.51
VPS29-210ENST00000552130 SH2D1BO14796 132 aa5.59□□□□□ -1.51
VPS29-210ENST00000552130 WNT9BO14905 357 aa5.59□□□□□ -1.51
VPS29-210ENST00000552130 ZBTB5O15062 677 aa5.59□□□□□ -1.51
VPS29-210ENST00000552130 EMC8O43402 210 aa5.59□□□□□ -1.51
VPS29-210ENST00000552130 XRCC2O43543 280 aa5.59□□□□□ -1.51
VPS29-210ENST00000552130 HUS1O60921 280 aa5.59□□□□□ -1.51
VPS29-210ENST00000552130 ENTPD5O75356 428 aa5.59□□□□□ -1.51
VPS29-210ENST00000552130 KRT33AO76009 404 aa5.59□□□□□ -1.51
VPS29-210ENST00000552130 NCR1O76036 304 aa5.59□□□□□ -1.51
VPS29-210ENST00000552130 AP2A2O94973 939 aa5.59□□□□□ -1.51
VPS29-210ENST00000552130 BMP10O95393 424 aa5.59□□□□□ -1.51
VPS29-210ENST00000552130 TMEM50AO95807 157 aa5.59□□□□□ -1.51
VPS29-210ENST00000552130 NR3C1P04150 777 aa5.59□□□□□ -1.51
VPS29-210ENST00000552130 ELFN1P0C7U0 828 aa5.59□□□□□ -1.51
VPS29-210ENST00000552130 RD3LP0DJH9 198 aa5.59□□□□□ -1.51
VPS29-210ENST00000552130 MYL2P10916 166 aa5.59□□□□□ -1.51
VPS29-210ENST00000552130 PSKH1P11801 424 aa5.59□□□□□ -1.51
VPS29-210ENST00000552130 UGT1A4P22310 534 aa5.59□□□□□ -1.51
VPS29-210ENST00000552130 GABRR2P28476 465 aa5.59□□□□□ -1.51
VPS29-210ENST00000552130 TACR3P29371 465 aa5.59□□□□□ -1.51
VPS29-210ENST00000552130 FEN1P39748 380 aaKnown RBP5.59□□□□□ -1.51
VPS29-210ENST00000552130 RPL13AP40429 203 aaKnown RBP5.59□□□□□ -1.51
VPS29-210ENST00000552130 AQP2P41181 271 aa5.59□□□□□ -1.51
VPS29-210ENST00000552130 CCR8P51685 355 aa5.59□□□□□ -1.51
VPS29-210ENST00000552130 PDX1P52945 283 aa5.59□□□□□ -1.51
VPS29-210ENST00000552130 KCNJ2P63252 427 aa5.59□□□□□ -1.51
VPS29-210ENST00000552130 CDR2Q01850 454 aa5.59□□□□□ -1.51
VPS29-210ENST00000552130 GUCY2DQ02846 1103 aa5.59□□□□□ -1.51
VPS29-210ENST00000552130 EXOC3L4Q17RC7 722 aa5.59□□□□□ -1.51
VPS29-210ENST00000552130 SNAI3Q3KNW1 292 aa5.59□□□□□ -1.51
VPS29-210ENST00000552130 LY6G5CQ5SRR4 150 aa5.59□□□□□ -1.51
VPS29-210ENST00000552130 KHDRBS2Q5VWX1 349 aaKnown RBP5.59□□□□□ -1.51
VPS29-210ENST00000552130 C22orf42Q6IC83 251 aa5.59□□□□□ -1.51
VPS29-210ENST00000552130 BHLHB9Q6PI77 547 aa5.59□□□□□ -1.51
VPS29-210ENST00000552130 ASRGL1Q7L266 308 aa5.59□□□□□ -1.51
VPS29-210ENST00000552130 SLC16A14Q7RTX9 510 aa5.59□□□□□ -1.51
VPS29-210ENST00000552130 NET1Q7Z628 596 aaPredicted RBP5.59□□□□□ -1.51
VPS29-210ENST00000552130 ERICH1Q86X53 443 aa5.59□□□□□ -1.51
VPS29-210ENST00000552130 ZC3H3Q8IXZ2 948 aaKnown RBP5.59□□□□□ -1.51
VPS29-210ENST00000552130 ZNF34Q8IZ26 560 aa5.59□□□□□ -1.51
VPS29-210ENST00000552130 SYS1Q8N2H4 156 aa5.59□□□□□ -1.51
VPS29-210ENST00000552130 ZNF786Q8N393 782 aa5.59□□□□□ -1.51
VPS29-210ENST00000552130 TEX45Q8NA69 505 aa5.59□□□□□ -1.51
VPS29-210ENST00000552130 NECAP1Q8NC96 275 aa5.59□□□□□ -1.51
VPS29-210ENST00000552130 THAP6Q8TBB0 222 aa5.59□□□□□ -1.51
VPS29-210ENST00000552130 FAM110BQ8TC76 370 aa5.59□□□□□ -1.51
VPS29-210ENST00000552130 TCP10LQ8TDR4 215 aa5.59□□□□□ -1.51
VPS29-210ENST00000552130 ASB10Q8WXI3 467 aa5.59□□□□□ -1.51
VPS29-210ENST00000552130 NR4A3Q92570 626 aa5.59□□□□□ -1.51
VPS29-210ENST00000552130 KXD1Q9BQD3 176 aa5.59□□□□□ -1.51
VPS29-210ENST00000552130 SH2D3AQ9BRG2 576 aa5.59□□□□□ -1.51
VPS29-210ENST00000552130 SPRY4Q9C004 299 aa5.59□□□□□ -1.51
VPS29-210ENST00000552130 ARRDC1-AS1Q9H2J1 176 aa5.59□□□□□ -1.51
VPS29-210ENST00000552130 GPN2Q9H9Y4 310 aaPredicted RBP5.59□□□□□ -1.51
VPS29-210ENST00000552130 C8orf4Q9NR00 106 aa5.59□□□□□ -1.51
VPS29-210ENST00000552130 NANSQ9NR45 359 aa5.59□□□□□ -1.51
VPS29-210ENST00000552130 ZNF701Q9NV72 531 aaPredicted RBP5.59□□□□□ -1.51
VPS29-210ENST00000552130 FLRT3Q9NZU0 649 aa5.59□□□□□ -1.51
VPS29-210ENST00000552130 TCRBV5S1A1TA0A578 114 aa5.58□□□□□ -1.52
VPS29-210ENST00000552130 GAGE12BA1L429 117 aa5.58□□□□□ -1.52
VPS29-210ENST00000552130 TMEM213A2RRL7 107 aa5.58□□□□□ -1.52
VPS29-210ENST00000552130 GAGE12HA6NDE8 117 aa5.58□□□□□ -1.52
VPS29-210ENST00000552130 SERINC4A6NH21 518 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms