RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 ARL8AQ96BM9 186 aa20.6■□□□□ 0.89
SMARCD1-209ENST00000550477 GIMAP5Q96F15 307 aa20.6■□□□□ 0.89
SMARCD1-209ENST00000550477 STACQ99469 402 aa20.6■□□□□ 0.89
SMARCD1-209ENST00000550477 TMEM204Q9BSN7 226 aa20.6■□□□□ 0.89
SMARCD1-209ENST00000550477 TRMOQ9BU70 441 aa20.6■□□□□ 0.89
SMARCD1-209ENST00000550477 BTBD2Q9BX70 525 aa20.6■□□□□ 0.89
SMARCD1-209ENST00000550477 GP6Q9HCN6 339 aa20.6■□□□□ 0.89
SMARCD1-209ENST00000550477 DUSP22Q9NRW4 184 aa20.6■□□□□ 0.89
SMARCD1-209ENST00000550477 GIN1Q9NXP7 522 aa20.6■□□□□ 0.89
SMARCD1-209ENST00000550477 FIS1Q9Y3D6 152 aa20.6■□□□□ 0.89
SMARCD1-209ENST00000550477 TLN2Q9Y4G6 2542 aa20.59■□□□□ 0.89
SMARCD1-209ENST00000550477 TMEM114B3SHH9 223 aa20.59■□□□□ 0.89
SMARCD1-209ENST00000550477 CD3EP07766 207 aa20.59■□□□□ 0.89
SMARCD1-209ENST00000550477 SDC1P18827 310 aa20.59■□□□□ 0.89
SMARCD1-209ENST00000550477 MAPK1P28482 360 aa20.59■□□□□ 0.89
SMARCD1-209ENST00000550477 SFTPDP35247 375 aa20.59■□□□□ 0.89
SMARCD1-209ENST00000550477 RPL38P63173 70 aaKnown RBP20.59■□□□□ 0.89
SMARCD1-209ENST00000550477 RNF165Q6ZSG1 346 aa20.59■□□□□ 0.89
SMARCD1-209ENST00000550477 IGFBPL1Q8WX77 278 aa20.59■□□□□ 0.89
SMARCD1-209ENST00000550477 FBXW5Q969U6 566 aa20.59■□□□□ 0.89
SMARCD1-209ENST00000550477 ZCCHC3Q9NUD5 404 aaKnown RBP20.59■□□□□ 0.89
SMARCD1-209ENST00000550477 FBXO34Q9NWN3 711 aa20.59■□□□□ 0.89
SMARCD1-209ENST00000550477 RNF115Q9Y4L5 304 aa20.59■□□□□ 0.89
SMARCD1-209ENST00000550477 GPC6Q9Y625 555 aaPredicted RBP20.59■□□□□ 0.89
SMARCD1-209ENST00000550477 GTPBP1O00178 669 aaKnown RBP20.58■□□□□ 0.89
SMARCD1-209ENST00000550477 PRKD3O94806 890 aa20.58■□□□□ 0.89
SMARCD1-209ENST00000550477 PLAUP00749 431 aa20.58■□□□□ 0.89
SMARCD1-209ENST00000550477 KRT16P08779 473 aa20.58■□□□□ 0.89
SMARCD1-209ENST00000550477 IDUAP35475 653 aa20.58■□□□□ 0.89
SMARCD1-209ENST00000550477 HPCAL1P37235 193 aa20.58■□□□□ 0.89
SMARCD1-209ENST00000550477 PDE7AQ13946 482 aa20.58■□□□□ 0.89
SMARCD1-209ENST00000550477 CAPRIN1Q14444 709 aaKnown RBP20.58■□□□□ 0.89
SMARCD1-209ENST00000550477 MLC1Q15049 377 aa20.58■□□□□ 0.89
SMARCD1-209ENST00000550477 ADAM5Q6NVV9 412 aa20.58■□□□□ 0.89
SMARCD1-209ENST00000550477 SLC43A2Q8N370 569 aa20.58■□□□□ 0.89
SMARCD1-209ENST00000550477 NATD1Q8N6N6 113 aa20.58■□□□□ 0.89
SMARCD1-209ENST00000550477 KIF18AQ8NI77 898 aa20.58■□□□□ 0.89
SMARCD1-209ENST00000550477 ROBO4Q8WZ75 1007 aa20.58■□□□□ 0.89
SMARCD1-209ENST00000550477 GTPBP3Q969Y2 492 aaKnown RBP20.58■□□□□ 0.89
SMARCD1-209ENST00000550477 S100PBPQ96BU1 408 aa20.58■□□□□ 0.89
SMARCD1-209ENST00000550477 PIGUQ9H490 435 aa20.58■□□□□ 0.89
SMARCD1-209ENST00000550477 L2HGDHQ9H9P8 463 aa20.58■□□□□ 0.89
SMARCD1-209ENST00000550477 BAIAP2L1Q9UHR4 511 aa20.58■□□□□ 0.89
SMARCD1-209ENST00000550477 FAF1Q9UNN5 650 aaPredicted RBP20.58■□□□□ 0.89
SMARCD1-209ENST00000550477 TP53P04637 393 aaPredicted RBP20.57■□□□□ 0.88
SMARCD1-209ENST00000550477 LINGO3P0C6S8 592 aa20.57■□□□□ 0.88
SMARCD1-209ENST00000550477 LINC00032P0C843 101 aa20.57■□□□□ 0.88
SMARCD1-209ENST00000550477 P2RX1P51575 399 aa20.57■□□□□ 0.88
SMARCD1-209ENST00000550477 SUMO3P55854 103 aaPredicted RBP20.57■□□□□ 0.88
SMARCD1-209ENST00000550477 P2RY6Q15077 328 aa20.57■□□□□ 0.88
SMARCD1-209ENST00000550477 ZNF239Q16600 458 aaKnown RBP20.57■□□□□ 0.88
SMARCD1-209ENST00000550477 CLEC12BQ2HXU8 276 aa20.57■□□□□ 0.88
SMARCD1-209ENST00000550477 GALNTL6Q49A17 601 aa20.57■□□□□ 0.88
SMARCD1-209ENST00000550477 RFTN2Q52LD8 501 aaPredicted RBP20.57■□□□□ 0.88
SMARCD1-209ENST00000550477 ZNF385BQ569K4 471 aa20.57■□□□□ 0.88
SMARCD1-209ENST00000550477 SFRP5Q5T4F7 317 aa20.57■□□□□ 0.88
SMARCD1-209ENST00000550477 Q6ZSR9 355 aa20.57■□□□□ 0.88
SMARCD1-209ENST00000550477 DDIASQ8IXT1 998 aa20.57■□□□□ 0.88
SMARCD1-209ENST00000550477 ADAMTS15Q8TE58 950 aa20.57■□□□□ 0.88
SMARCD1-209ENST00000550477 RNF128Q8TEB7 428 aa20.57■□□□□ 0.88
SMARCD1-209ENST00000550477 C16orf58Q96GQ5 468 aa20.57■□□□□ 0.88
SMARCD1-209ENST00000550477 FCRL1Q96LA6 429 aa20.57■□□□□ 0.88
SMARCD1-209ENST00000550477 EML4Q9HC35 981 aaKnown RBP20.57■□□□□ 0.88
SMARCD1-209ENST00000550477 ATAD3AQ9NVI7 634 aa20.57■□□□□ 0.88
SMARCD1-209ENST00000550477 KLHL13Q9P2N7 655 aa20.57■□□□□ 0.88
SMARCD1-209ENST00000550477 KIAA1324LA8MWY0 1029 aaPredicted RBP20.56■□□□□ 0.88
SMARCD1-209ENST00000550477 ZNF195O14628 629 aa20.56■□□□□ 0.88
SMARCD1-209ENST00000550477 CLOCKO15516 846 aa20.56■□□□□ 0.88
SMARCD1-209ENST00000550477 TRIM13O60858 407 aa20.56■□□□□ 0.88
SMARCD1-209ENST00000550477 HMGN2P05204 90 aaKnown RBP20.56■□□□□ 0.88
SMARCD1-209ENST00000550477 YES1P07947 543 aa20.56■□□□□ 0.88
SMARCD1-209ENST00000550477 VEZF1Q14119 521 aa20.56■□□□□ 0.88
SMARCD1-209ENST00000550477 LASP1Q14847 261 aaKnown RBP20.56■□□□□ 0.88
SMARCD1-209ENST00000550477 TMEM176BQ3YBM2 270 aaPredicted RBP20.56■□□□□ 0.88
SMARCD1-209ENST00000550477 CCNJQ5T5M9 372 aa20.56■□□□□ 0.88
SMARCD1-209ENST00000550477 FCRLAQ7L513 359 aa20.56■□□□□ 0.88
SMARCD1-209ENST00000550477 SSX8Q7RTT4 187 aa20.56■□□□□ 0.88
SMARCD1-209ENST00000550477 TUSC5Q8IXB3 177 aa20.56■□□□□ 0.88
SMARCD1-209ENST00000550477 CLHC1Q8NHS4 586 aa20.56■□□□□ 0.88
SMARCD1-209ENST00000550477 POC1BQ8TC44 478 aa20.56■□□□□ 0.88
SMARCD1-209ENST00000550477 ABHD3Q8WU67 409 aa20.56■□□□□ 0.88
SMARCD1-209ENST00000550477 KISS1RQ969F8 398 aaPredicted RBP20.56■□□□□ 0.88
SMARCD1-209ENST00000550477 FAM120BQ96EK7 910 aaKnown RBP20.56■□□□□ 0.88
SMARCD1-209ENST00000550477 PRPF18Q99633 342 aaKnown RBP20.56■□□□□ 0.88
SMARCD1-209ENST00000550477 NPAS1Q99742 590 aa20.56■□□□□ 0.88
SMARCD1-209ENST00000550477 TNFRSF12AQ9NP84 129 aa20.56■□□□□ 0.88
SMARCD1-209ENST00000550477 PTGDR2Q9Y5Y4 395 aa20.56■□□□□ 0.88
SMARCD1-209ENST00000550477 FAM153BP0C7A2 387 aa20.55■□□□□ 0.88
SMARCD1-209ENST00000550477 SLC7A1P30825 629 aa20.55■□□□□ 0.88
SMARCD1-209ENST00000550477 FOXF1Q12946 379 aa20.55■□□□□ 0.88
SMARCD1-209ENST00000550477 TNK1Q13470 666 aa20.55■□□□□ 0.88
SMARCD1-209ENST00000550477 TP53BP2Q13625 1128 aa20.55■□□□□ 0.88
SMARCD1-209ENST00000550477 LSM12Q3MHD2 195 aaKnown RBP20.55■□□□□ 0.88
SMARCD1-209ENST00000550477 FAM153CQ494X1 144 aa20.55■□□□□ 0.88
SMARCD1-209ENST00000550477 NCMAPQ5T1S8 102 aa20.55■□□□□ 0.88
SMARCD1-209ENST00000550477 CDC73Q6P1J9 531 aa20.55■□□□□ 0.88
SMARCD1-209ENST00000550477 TFAP2EQ6VUC0 442 aa20.55■□□□□ 0.88
SMARCD1-209ENST00000550477 ZAR1Q86SH2 424 aa20.55■□□□□ 0.88
SMARCD1-209ENST00000550477 OR56A1Q8NGH5 318 aa20.55■□□□□ 0.88
SMARCD1-209ENST00000550477 FBXO27Q8NI29 283 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms