RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 EIF3MQ7L2H7 374 aaKnown RBP17.55■□□□□ 0.4
DDX54-207ENST00000550016 PIGWQ7Z7B1 504 aa17.55■□□□□ 0.4
DDX54-207ENST00000550016 SFXN2Q96NB2 322 aa17.55■□□□□ 0.4
DDX54-207ENST00000550016 CCDC106Q9BWC9 280 aa17.55■□□□□ 0.4
DDX54-207ENST00000550016 IKZF5Q9H5V7 419 aa17.55■□□□□ 0.4
DDX54-207ENST00000550016 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.55■□□□□ 0.4
DDX54-207ENST00000550016 MEMO1Q9Y316 297 aa17.55■□□□□ 0.4
DDX54-207ENST00000550016 L3MBTL1Q9Y468 752 aa17.55■□□□□ 0.4
DDX54-207ENST00000550016 A0A0G2JPF8 293 aa17.54■□□□□ 0.4
DDX54-207ENST00000550016 AGAP5A6NIR3 686 aa17.54■□□□□ 0.4
DDX54-207ENST00000550016 FIGNL2A6NMB9 653 aa17.54■□□□□ 0.4
DDX54-207ENST00000550016 HNRNPCL2B2RXH8 293 aa17.54■□□□□ 0.4
DDX54-207ENST00000550016 HNRNPCL3B7ZW38 293 aa17.54■□□□□ 0.4
DDX54-207ENST00000550016 FAM47E-STBD1D6RA91 191 aa17.54■□□□□ 0.4
DDX54-207ENST00000550016 E9PLN8 166 aa17.54■□□□□ 0.4
DDX54-207ENST00000550016 MRASO14807 208 aa17.54■□□□□ 0.4
DDX54-207ENST00000550016 OIP5O43482 229 aa17.54■□□□□ 0.4
DDX54-207ENST00000550016 HNRNPCL1O60812 293 aaKnown RBP17.54■□□□□ 0.4
DDX54-207ENST00000550016 WDR1O75083 606 aa17.54■□□□□ 0.4
DDX54-207ENST00000550016 HOXD4P09016 255 aaPredicted RBP17.54■□□□□ 0.4
DDX54-207ENST00000550016 NUDT7P0C024 238 aa17.54■□□□□ 0.4
DDX54-207ENST00000550016 HNRNPCL4P0DMR1 293 aa17.54■□□□□ 0.4
DDX54-207ENST00000550016 ZNF41P51814 821 aaPredicted RBP17.54■□□□□ 0.4
DDX54-207ENST00000550016 SUMO3P55854 103 aaPredicted RBP17.54■□□□□ 0.4
DDX54-207ENST00000550016 TRMT5Q32P41 509 aaKnown RBP17.54■□□□□ 0.4
DDX54-207ENST00000550016 GCNT6Q5T4J0 391 aa17.54■□□□□ 0.4
DDX54-207ENST00000550016 PRAMEF8Q5VWM4 474 aa17.54■□□□□ 0.4
DDX54-207ENST00000550016 PRAMEF7Q5VXH5 474 aa17.54■□□□□ 0.4
DDX54-207ENST00000550016 REP15Q6BDI9 236 aa17.54■□□□□ 0.4
DDX54-207ENST00000550016 CBLN3Q6UW01 205 aa17.54■□□□□ 0.4
DDX54-207ENST00000550016 ENPP6Q6UWR7 440 aa17.54■□□□□ 0.4
DDX54-207ENST00000550016 ARSKQ6UWY0 536 aa17.54■□□□□ 0.4
DDX54-207ENST00000550016 PEX5LQ8IYB4 626 aa17.54■□□□□ 0.4
DDX54-207ENST00000550016 PM20D2Q8IYS1 436 aa17.54■□□□□ 0.4
DDX54-207ENST00000550016 METTL25Q8N6Q8 603 aa17.54■□□□□ 0.4
DDX54-207ENST00000550016 PCYOX1LQ8NBM8 494 aa17.54■□□□□ 0.4
DDX54-207ENST00000550016 RP9Q8TA86 221 aaKnown RBP17.54■□□□□ 0.4
DDX54-207ENST00000550016 TMEM19Q96HH6 336 aa17.54■□□□□ 0.4
DDX54-207ENST00000550016 TREX2Q9BQ50 279 aaPredicted RBP17.54■□□□□ 0.4
DDX54-207ENST00000550016 VKORC1Q9BQB6 163 aa17.54■□□□□ 0.4
DDX54-207ENST00000550016 THUMPD3Q9BV44 507 aaKnown RBP17.54■□□□□ 0.4
DDX54-207ENST00000550016 LAT2Q9GZY6 243 aa17.54■□□□□ 0.4
DDX54-207ENST00000550016 QRSL1Q9H0R6 528 aaKnown RBP17.54■□□□□ 0.4
DDX54-207ENST00000550016 MYLK2Q9H1R3 596 aa17.54■□□□□ 0.4
DDX54-207ENST00000550016 ICAM5Q9UMF0 924 aa17.54■□□□□ 0.4
DDX54-207ENST00000550016 SLC35A3Q9Y2D2 325 aa17.54■□□□□ 0.4
DDX54-207ENST00000550016 DOPEY2Q9Y3R5 2298 aa17.54■□□□□ 0.4
DDX54-207ENST00000550016 WIPF3A6NGB9 483 aa17.53■□□□□ 0.4
DDX54-207ENST00000550016 AHRRA9YTQ3 701 aa17.53■□□□□ 0.4
DDX54-207ENST00000550016 LINC01387J3KSC0 135 aa17.53■□□□□ 0.4
DDX54-207ENST00000550016 LDLRP01130 860 aa17.53■□□□□ 0.4
DDX54-207ENST00000550016 DBIP07108 87 aaKnown RBP17.53■□□□□ 0.4
DDX54-207ENST00000550016 ARAFP10398 606 aa17.53■□□□□ 0.4
DDX54-207ENST00000550016 GABRA1P14867 456 aa17.53■□□□□ 0.4
DDX54-207ENST00000550016 CPN1P15169 458 aa17.53■□□□□ 0.4
DDX54-207ENST00000550016 RPS4Y1P22090 263 aaKnown RBP17.53■□□□□ 0.4
DDX54-207ENST00000550016 ACVR2AP27037 513 aa17.53■□□□□ 0.4
DDX54-207ENST00000550016 KCNJ10P78508 379 aa17.53■□□□□ 0.4
DDX54-207ENST00000550016 TMEM44Q2T9K0 475 aa17.53■□□□□ 0.4
DDX54-207ENST00000550016 NDUFAF6Q330K2 333 aa17.53■□□□□ 0.4
DDX54-207ENST00000550016 DCST1Q5T197 706 aa17.53■□□□□ 0.4
DDX54-207ENST00000550016 RAET1LQ5VY80 246 aa17.53■□□□□ 0.4
DDX54-207ENST00000550016 HMGN2P46Q86SG4 172 aa17.53■□□□□ 0.4
DDX54-207ENST00000550016 C10orf111Q8N326 155 aa17.53■□□□□ 0.4
DDX54-207ENST00000550016 OR5W2Q8NH69 310 aa17.53■□□□□ 0.4
DDX54-207ENST00000550016 SSC4DQ8WTU2 575 aa17.53■□□□□ 0.4
DDX54-207ENST00000550016 MAL2Q969L2 176 aa17.53■□□□□ 0.4
DDX54-207ENST00000550016 LRRC58Q96CX6 371 aa17.53■□□□□ 0.4
DDX54-207ENST00000550016 WDYHV1Q96HA8 205 aa17.53■□□□□ 0.4
DDX54-207ENST00000550016 DMRTA2Q96SC8 542 aa17.53■□□□□ 0.4
DDX54-207ENST00000550016 KLHDC3Q9BQ90 382 aa17.53■□□□□ 0.4
DDX54-207ENST00000550016 PIGQQ9BRB3 760 aa17.53■□□□□ 0.4
DDX54-207ENST00000550016 PRDM14Q9GZV8 571 aa17.53■□□□□ 0.4
DDX54-207ENST00000550016 MED17Q9NVC6 651 aa17.53■□□□□ 0.4
DDX54-207ENST00000550016 GID8Q9NWU2 228 aa17.53■□□□□ 0.4
DDX54-207ENST00000550016 ALKBH4Q9NXW9 302 aa17.53■□□□□ 0.4
DDX54-207ENST00000550016 CAMK2AQ9UQM7 478 aa17.53■□□□□ 0.4
DDX54-207ENST00000550016 VDAC3Q9Y277 283 aa17.53■□□□□ 0.4
DDX54-207ENST00000550016 ARL2BPQ9Y2Y0 163 aa17.53■□□□□ 0.4
DDX54-207ENST00000550016 LRRK2Q5S007 2527 aa17.53■□□□□ 0.4
DDX54-207ENST00000550016 DSPPQ9NZW4 1301 aa17.52■□□□□ 0.4
DDX54-207ENST00000550016 OR2M5A3KFT3 312 aa17.52■□□□□ 0.4
DDX54-207ENST00000550016 C5orf58C9J3I9 102 aa17.52■□□□□ 0.4
DDX54-207ENST00000550016 NUDT14O95848 222 aa17.52■□□□□ 0.4
DDX54-207ENST00000550016 COX4I1P13073 169 aa17.52■□□□□ 0.4
DDX54-207ENST00000550016 IL7RP16871 459 aa17.52■□□□□ 0.4
DDX54-207ENST00000550016 PGM1P36871 562 aa17.52■□□□□ 0.4
DDX54-207ENST00000550016 SKP2Q13309 424 aa17.52■□□□□ 0.4
DDX54-207ENST00000550016 CAPRIN1Q14444 709 aaKnown RBP17.52■□□□□ 0.4
DDX54-207ENST00000550016 PLPPR5Q32ZL2 321 aa17.52■□□□□ 0.4
DDX54-207ENST00000550016 TMEM211Q6ICI0 200 aa17.52■□□□□ 0.4
DDX54-207ENST00000550016 CMIPQ8IY22 773 aa17.52■□□□□ 0.4
DDX54-207ENST00000550016 ULK2Q8IYT8 1036 aa17.52■□□□□ 0.4
DDX54-207ENST00000550016 TMCO5AQ8N6Q1 288 aa17.52■□□□□ 0.4
DDX54-207ENST00000550016 POU5F2Q8N7G0 328 aa17.52■□□□□ 0.4
DDX54-207ENST00000550016 TOR1AIP2Q8NFQ8 470 aa17.52■□□□□ 0.4
DDX54-207ENST00000550016 GPR119Q8TDV5 335 aa17.52■□□□□ 0.4
DDX54-207ENST00000550016 PHF10Q8WUB8 498 aaKnown RBP17.52■□□□□ 0.4
DDX54-207ENST00000550016 WDR60Q8WVS4 1066 aa17.52■□□□□ 0.4
DDX54-207ENST00000550016 ZBTB8AQ96BR9 441 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms