RNA–Protein interactions for RNA: ENST00000550008.6

CUX1-214, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-214ENST00000550008 BSGP35613 385 aa14.01□□□□□ -0.17
CUX1-214ENST00000550008 AP2S1P53680 142 aaPredicted RBP14.01□□□□□ -0.17
CUX1-214ENST00000550008 HTRA4P83105 476 aaPredicted RBP14.01□□□□□ -0.17
CUX1-214ENST00000550008 PAQR6Q6TCH4 344 aa14.01□□□□□ -0.17
CUX1-214ENST00000550008 TMEM184AQ6ZMB5 413 aa14.01□□□□□ -0.17
CUX1-214ENST00000550008 SYT14Q8NB59 555 aa14.01□□□□□ -0.17
CUX1-214ENST00000550008 TBC1D20Q96BZ9 403 aa14.01□□□□□ -0.17
CUX1-214ENST00000550008 POT1Q9NUX5 634 aa14.01□□□□□ -0.17
CUX1-214ENST00000550008 DUX4Q9UBX2 424 aa14.01□□□□□ -0.17
CUX1-214ENST00000550008 GMEB1Q9Y692 573 aa14.01□□□□□ -0.17
CUX1-214ENST00000550008 PIKFYVEQ9Y2I7 2098 aa14.01□□□□□ -0.17
CUX1-214ENST00000550008 PRKYO43930 277 aa14.01□□□□□ -0.17
CUX1-214ENST00000550008 NCR1O76036 304 aa14.01□□□□□ -0.17
CUX1-214ENST00000550008 MAS1P04201 325 aa14.01□□□□□ -0.17
CUX1-214ENST00000550008 F13BP05160 661 aa14.01□□□□□ -0.17
CUX1-214ENST00000550008 BMP4P12644 408 aa14.01□□□□□ -0.17
CUX1-214ENST00000550008 MAOAP21397 527 aa14.01□□□□□ -0.17
CUX1-214ENST00000550008 SLC35A2P78381 396 aa14.01□□□□□ -0.17
CUX1-214ENST00000550008 SGCBQ16585 318 aa14.01□□□□□ -0.17
CUX1-214ENST00000550008 PGGHGQ32M88 737 aa14.01□□□□□ -0.17
CUX1-214ENST00000550008 ARHGAP11AQ6P4F7 1023 aa14.01□□□□□ -0.17
CUX1-214ENST00000550008 IL20RBQ6UXL0 311 aa14.01□□□□□ -0.17
CUX1-214ENST00000550008 BTN2A1Q7KYR7 527 aa14.01□□□□□ -0.17
CUX1-214ENST00000550008 KLHDC8BQ8IXV7 354 aa14.01□□□□□ -0.17
CUX1-214ENST00000550008 MINDY2Q8NBR6 621 aa14.01□□□□□ -0.17
CUX1-214ENST00000550008 TP63Q9H3D4 680 aaPredicted RBP14.01□□□□□ -0.17
CUX1-214ENST00000550008 ATP13A2Q9NQ11 1180 aa14.01□□□□□ -0.17
CUX1-214ENST00000550008 AK6Q9Y3D8 172 aaKnown RBP14.01□□□□□ -0.17
CUX1-214ENST00000550008 AP1M2Q9Y6Q5 423 aa14.01□□□□□ -0.17
CUX1-214ENST00000550008 INMT-MINDY4F8WBC2 141 aa14□□□□□ -0.17
CUX1-214ENST00000550008 PEX12O00623 359 aa14□□□□□ -0.17
CUX1-214ENST00000550008 PIP5K1CO60331 668 aa14□□□□□ -0.17
CUX1-214ENST00000550008 PPM1BO75688 479 aa14□□□□□ -0.17
CUX1-214ENST00000550008 TCTE1Q5JU00 501 aa14□□□□□ -0.17
CUX1-214ENST00000550008 TCTN3Q6NUS6 607 aa14□□□□□ -0.17
CUX1-214ENST00000550008 Q6ZS52 159 aa14□□□□□ -0.17
CUX1-214ENST00000550008 OR8S1Q8NH09 359 aa14□□□□□ -0.17
CUX1-214ENST00000550008 UCN3Q969E3 161 aa14□□□□□ -0.17
CUX1-214ENST00000550008 BCL2L14Q9BZR8 327 aa14□□□□□ -0.17
CUX1-214ENST00000550008 MMP28Q9H239 520 aa14□□□□□ -0.17
CUX1-214ENST00000550008 SIRT5Q9NXA8 310 aa14□□□□□ -0.17
CUX1-214ENST00000550008 YBX2Q9Y2T7 364 aaKnown RBP14□□□□□ -0.17
CUX1-214ENST00000550008 SOCS6O14544 535 aa14□□□□□ -0.17
CUX1-214ENST00000550008 SEC14L2O76054 403 aa14□□□□□ -0.17
CUX1-214ENST00000550008 ADAM8P78325 824 aa14□□□□□ -0.17
CUX1-214ENST00000550008 TMEM53Q6P2H8 277 aa14□□□□□ -0.17
CUX1-214ENST00000550008 PAMR1Q6UXH9 720 aa14□□□□□ -0.17
CUX1-214ENST00000550008 TMED4Q7Z7H5 227 aa14□□□□□ -0.17
CUX1-214ENST00000550008 CNN2Q99439 309 aaKnown RBP14□□□□□ -0.17
CUX1-214ENST00000550008 GPN2Q9H9Y4 310 aaPredicted RBP14□□□□□ -0.17
CUX1-214ENST00000550008 DIABLOQ9NR28 239 aa14□□□□□ -0.17
CUX1-214ENST00000550008 MYEF2Q9P2K5 600 aaKnown RBP14□□□□□ -0.17
CUX1-214ENST00000550008 ZNF41P51814 821 aaPredicted RBP14□□□□□ -0.17
CUX1-214ENST00000550008 WNT3P56703 355 aa14□□□□□ -0.17
CUX1-214ENST00000550008 SCGB2B2Q4G0G5 96 aa14□□□□□ -0.17
CUX1-214ENST00000550008 KIAA0895LQ68EN5 471 aa14□□□□□ -0.17
CUX1-214ENST00000550008 PGBD2Q6P3X8 592 aa14□□□□□ -0.17
CUX1-214ENST00000550008 PRICKLE2Q7Z3G6 844 aa14□□□□□ -0.17
CUX1-214ENST00000550008 UBQLNLQ8IYU4 475 aa14□□□□□ -0.17
CUX1-214ENST00000550008 OR6Q1Q8NGQ2 317 aa14□□□□□ -0.17
CUX1-214ENST00000550008 CNRIP1Q96F85 164 aaPredicted RBP14□□□□□ -0.17
CUX1-214ENST00000550008 FAIMQ9NVQ4 179 aa14□□□□□ -0.17
CUX1-214ENST00000550008 FMO6PO60774 539 aa13.99□□□□□ -0.17
CUX1-214ENST00000550008 TRIM3O75382 744 aaPredicted RBP13.99□□□□□ -0.17
CUX1-214ENST00000550008 CD40LGP29965 261 aa13.99□□□□□ -0.17
CUX1-214ENST00000550008 MAN2A2P49641 1150 aa13.99□□□□□ -0.17
CUX1-214ENST00000550008 GP2P55259 537 aaKnown RBP13.99□□□□□ -0.17
CUX1-214ENST00000550008 ZP2Q05996 745 aa13.99□□□□□ -0.17
CUX1-214ENST00000550008 HES5Q5TA89 166 aa13.99□□□□□ -0.17
CUX1-214ENST00000550008 DESI1Q6ICB0 168 aa13.99□□□□□ -0.17
CUX1-214ENST00000550008 MFSD12Q6NUT3 480 aa13.99□□□□□ -0.17
CUX1-214ENST00000550008 TNFRSF13CQ96RJ3 184 aa13.99□□□□□ -0.17
CUX1-214ENST00000550008 C1QTNF2Q9BXJ5 285 aa13.99□□□□□ -0.17
CUX1-214ENST00000550008 PPIL1Q9Y3C6 166 aa13.99□□□□□ -0.17
CUX1-214ENST00000550008 HSPB11Q9Y547 144 aa13.99□□□□□ -0.17
CUX1-214ENST00000550008 A0A1W2PPL8 197 aa13.99□□□□□ -0.17
CUX1-214ENST00000550008 AGAP5A6NIR3 686 aa13.99□□□□□ -0.17
CUX1-214ENST00000550008 TOXO94900 526 aa13.99□□□□□ -0.17
CUX1-214ENST00000550008 HSD11B1P28845 292 aa13.99□□□□□ -0.17
CUX1-214ENST00000550008 TNFSF8P32971 234 aa13.99□□□□□ -0.17
CUX1-214ENST00000550008 MAP2K3P46734 347 aa13.99□□□□□ -0.17
CUX1-214ENST00000550008 TAS2R43P59537 309 aa13.99□□□□□ -0.17
CUX1-214ENST00000550008 SERPINA12Q8IW75 414 aa13.99□□□□□ -0.17
CUX1-214ENST00000550008 ELSPBP1Q96BH3 223 aa13.99□□□□□ -0.17
CUX1-214ENST00000550008 RBP7Q96R05 134 aa13.99□□□□□ -0.17
CUX1-214ENST00000550008 SLC25A18Q9H1K4 315 aa13.99□□□□□ -0.17
CUX1-214ENST00000550008 RXFP3Q9NSD7 469 aa13.99□□□□□ -0.17
CUX1-214ENST00000550008 EIF3KQ9UBQ5 218 aaKnown RBP13.99□□□□□ -0.17
CUX1-214ENST00000550008 DNAJC13O75165 2243 aa13.99□□□□□ -0.17
CUX1-214ENST00000550008 A0A087WUU8 490 aa13.99□□□□□ -0.17
CUX1-214ENST00000550008 H7C1C5 153 aa13.99□□□□□ -0.17
CUX1-214ENST00000550008 MOSPD3O75425 235 aa13.99□□□□□ -0.17
CUX1-214ENST00000550008 CHRM4P08173 479 aa13.99□□□□□ -0.17
CUX1-214ENST00000550008 AP3S2P59780 193 aa13.99□□□□□ -0.17
CUX1-214ENST00000550008 LCN6P62502 163 aa13.99□□□□□ -0.17
CUX1-214ENST00000550008 TSPAN31Q12999 210 aa13.99□□□□□ -0.17
CUX1-214ENST00000550008 KCNAB1Q14722 419 aa13.99□□□□□ -0.17
CUX1-214ENST00000550008 OLFML2AQ68BL7 652 aa13.99□□□□□ -0.17
CUX1-214ENST00000550008 TIGD4Q8IY51 512 aa13.99□□□□□ -0.17
CUX1-214ENST00000550008 OR6C4Q8NGE1 309 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms