RNA–Protein interactions for RNA: ENST00000549970.5

VPS29-207, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-207ENST00000549970 OIP5O43482 229 aa14.65□□□□□ -0.06
VPS29-207ENST00000549970 CXCL13O43927 109 aa14.65□□□□□ -0.06
VPS29-207ENST00000549970 NUDT14O95848 222 aa14.65□□□□□ -0.06
VPS29-207ENST00000549970 PLGP00747 810 aaPredicted RBP14.65□□□□□ -0.06
VPS29-207ENST00000549970 MYZAPP0CAP1 466 aa14.65□□□□□ -0.06
VPS29-207ENST00000549970 CD8BP10966 210 aa14.65□□□□□ -0.06
VPS29-207ENST00000549970 BGNP21810 368 aa14.65□□□□□ -0.06
VPS29-207ENST00000549970 ME2P23368 584 aa14.65□□□□□ -0.06
VPS29-207ENST00000549970 CCKARP32238 428 aa14.65□□□□□ -0.06
VPS29-207ENST00000549970 SLC1A6P48664 564 aa14.65□□□□□ -0.06
VPS29-207ENST00000549970 C21orf58P58505 322 aa14.65□□□□□ -0.06
VPS29-207ENST00000549970 RPS26P62854 115 aaKnown RBP14.65□□□□□ -0.06
VPS29-207ENST00000549970 RAC1P63000 192 aa14.65□□□□□ -0.06
VPS29-207ENST00000549970 FOXF1Q12946 379 aa14.65□□□□□ -0.06
VPS29-207ENST00000549970 GUSBP1Q15486 140 aa14.65□□□□□ -0.06
VPS29-207ENST00000549970 CTU2Q2VPK5 515 aaKnown RBP14.65□□□□□ -0.06
VPS29-207ENST00000549970 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.65□□□□□ -0.06
VPS29-207ENST00000549970 OR4F3Q6IEY1 312 aa14.65□□□□□ -0.06
VPS29-207ENST00000549970 FAM214BQ7L5A3 538 aa14.65□□□□□ -0.06
VPS29-207ENST00000549970 CAMKMTQ7Z624 323 aa14.65□□□□□ -0.06
VPS29-207ENST00000549970 CLEC4FQ8N1N0 589 aa14.65□□□□□ -0.06
VPS29-207ENST00000549970 ZNF527Q8NB42 609 aa14.65□□□□□ -0.06
VPS29-207ENST00000549970 OR2V1Q8NHB1 315 aa14.65□□□□□ -0.06
VPS29-207ENST00000549970 WFIKKN1Q96NZ8 548 aa14.65□□□□□ -0.06
VPS29-207ENST00000549970 ZIM3Q96PE6 472 aa14.65□□□□□ -0.06
VPS29-207ENST00000549970 OR7D2Q96RA2 312 aa14.65□□□□□ -0.06
VPS29-207ENST00000549970 SORT1Q99523 831 aa14.65□□□□□ -0.06
VPS29-207ENST00000549970 SLC39A3Q9BRY0 314 aa14.65□□□□□ -0.06
VPS29-207ENST00000549970 MED18Q9BUE0 208 aa14.65□□□□□ -0.06
VPS29-207ENST00000549970 HOXD1Q9GZZ0 328 aa14.65□□□□□ -0.06
VPS29-207ENST00000549970 SSU72Q9NP77 194 aaKnown RBP14.65□□□□□ -0.06
VPS29-207ENST00000549970 KCNK9Q9NPC2 374 aa14.65□□□□□ -0.06
VPS29-207ENST00000549970 ASIC5Q9NY37 505 aa14.65□□□□□ -0.06
VPS29-207ENST00000549970 C6orf203Q9P0P8 240 aaPredicted RBP14.65□□□□□ -0.06
VPS29-207ENST00000549970 MCTS1Q9ULC4 181 aaKnown RBP14.65□□□□□ -0.06
VPS29-207ENST00000549970 CARD8Q9Y2G2 431 aa14.65□□□□□ -0.06
VPS29-207ENST00000549970 RAP2CQ9Y3L5 183 aa14.65□□□□□ -0.06
VPS29-207ENST00000549970 A0A0J9YW62 118 aa14.64□□□□□ -0.07
VPS29-207ENST00000549970 H3BNH8 94 aa14.64□□□□□ -0.07
VPS29-207ENST00000549970 ADAMDEC1O15204 470 aa14.64□□□□□ -0.07
VPS29-207ENST00000549970 ZNF500O60304 480 aaPredicted RBP14.64□□□□□ -0.07
VPS29-207ENST00000549970 ATE1O95260 518 aa14.64□□□□□ -0.07
VPS29-207ENST00000549970 SYNGR4O95473 234 aa14.64□□□□□ -0.07
VPS29-207ENST00000549970 LINGO3P0C6S8 592 aa14.64□□□□□ -0.07
VPS29-207ENST00000549970 DHRS4L1P0CG22 281 aa14.64□□□□□ -0.07
VPS29-207ENST00000549970 IL11P20809 199 aa14.64□□□□□ -0.07
VPS29-207ENST00000549970 SFTPDP35247 375 aa14.64□□□□□ -0.07
VPS29-207ENST00000549970 UGT2B10P36537 528 aa14.64□□□□□ -0.07
VPS29-207ENST00000549970 RPL14P50914 215 aaKnown RBP14.64□□□□□ -0.07
VPS29-207ENST00000549970 ATP12AP54707 1039 aa14.64□□□□□ -0.07
VPS29-207ENST00000549970 RIPPLY3P57055 190 aa14.64□□□□□ -0.07
VPS29-207ENST00000549970 EXOC3L2Q2M3D2 409 aa14.64□□□□□ -0.07
VPS29-207ENST00000549970 SMU1Q2TAY7 513 aa14.64□□□□□ -0.07
VPS29-207ENST00000549970 NDUFAF6Q330K2 333 aa14.64□□□□□ -0.07
VPS29-207ENST00000549970 KLHL26Q53HC5 615 aa14.64□□□□□ -0.07
VPS29-207ENST00000549970 HBMQ6B0K9 141 aa14.64□□□□□ -0.07
VPS29-207ENST00000549970 BHLHB9Q6PI77 547 aa14.64□□□□□ -0.07
VPS29-207ENST00000549970 CBLN3Q6UW01 205 aa14.64□□□□□ -0.07
VPS29-207ENST00000549970 ESPNLQ6ZVH7 1005 aa14.64□□□□□ -0.07
VPS29-207ENST00000549970 ZNF550Q7Z398 422 aa14.64□□□□□ -0.07
VPS29-207ENST00000549970 MTERF4Q7Z6M4 381 aaKnown RBP14.64□□□□□ -0.07
VPS29-207ENST00000549970 TGIF2LYQ8IUE0 185 aa14.64□□□□□ -0.07
VPS29-207ENST00000549970 ALPK1Q96QP1 1244 aa14.64□□□□□ -0.07
VPS29-207ENST00000549970 PAQR5Q9NXK6 330 aaPredicted RBP14.64□□□□□ -0.07
VPS29-207ENST00000549970 ELOVL5Q9NYP7 299 aa14.64□□□□□ -0.07
VPS29-207ENST00000549970 RAB21Q9UL25 225 aa14.64□□□□□ -0.07
VPS29-207ENST00000549970 EMC9Q9Y3B6 208 aa14.64□□□□□ -0.07
VPS29-207ENST00000549970 RNF103-CHMP3A0A140T963 221 aa14.63□□□□□ -0.07
VPS29-207ENST00000549970 C16orf97H3BN30 126 aa14.63□□□□□ -0.07
VPS29-207ENST00000549970 GTPBP1O00178 669 aaKnown RBP14.63□□□□□ -0.07
VPS29-207ENST00000549970 SOX30O94993 753 aa14.63□□□□□ -0.07
VPS29-207ENST00000549970 CD99P14209 185 aa14.63□□□□□ -0.07
VPS29-207ENST00000549970 MATN1P21941 496 aa14.63□□□□□ -0.07
VPS29-207ENST00000549970 SHC1P29353 583 aa14.63□□□□□ -0.07
VPS29-207ENST00000549970 EIF1P41567 113 aaKnown RBP14.63□□□□□ -0.07
VPS29-207ENST00000549970 PCYT1AP49585 367 aa14.63□□□□□ -0.07
VPS29-207ENST00000549970 P2RX1P51575 399 aa14.63□□□□□ -0.07
VPS29-207ENST00000549970 CTBP2P56545 445 aa14.63□□□□□ -0.07
VPS29-207ENST00000549970 PPP2R2AP63151 447 aa14.63□□□□□ -0.07
VPS29-207ENST00000549970 MPP2Q14168 576 aa14.63□□□□□ -0.07
VPS29-207ENST00000549970 PDSS1Q5T2R2 415 aa14.63□□□□□ -0.07
VPS29-207ENST00000549970 C6orf120Q7Z4R8 191 aa14.63□□□□□ -0.07
VPS29-207ENST00000549970 ANKRD46Q86W74 232 aa14.63□□□□□ -0.07
VPS29-207ENST00000549970 LILRA2Q8N149 483 aa14.63□□□□□ -0.07
VPS29-207ENST00000549970 TMCO5AQ8N6Q1 288 aa14.63□□□□□ -0.07
VPS29-207ENST00000549970 OR4A15Q8NGL6 344 aa14.63□□□□□ -0.07
VPS29-207ENST00000549970 RFWD2Q8NHY2 731 aa14.63□□□□□ -0.07
VPS29-207ENST00000549970 MBD6Q96DN6 1003 aa14.63□□□□□ -0.07
VPS29-207ENST00000549970 ZC3HAV1LQ96H79 300 aaKnown RBP14.63□□□□□ -0.07
VPS29-207ENST00000549970 GMPPAQ96IJ6 420 aaPredicted RBP14.63□□□□□ -0.07
VPS29-207ENST00000549970 SLC35G5Q96KT7 338 aa14.63□□□□□ -0.07
VPS29-207ENST00000549970 KLHL15Q96M94 604 aa14.63□□□□□ -0.07
VPS29-207ENST00000549970 SDF2Q99470 211 aa14.63□□□□□ -0.07
VPS29-207ENST00000549970 PAIP2Q9BPZ3 127 aaKnown RBP14.63□□□□□ -0.07
VPS29-207ENST00000549970 TMUB1Q9BVT8 246 aa14.63□□□□□ -0.07
VPS29-207ENST00000549970 NUF2Q9BZD4 464 aa14.63□□□□□ -0.07
VPS29-207ENST00000549970 DPY30Q9C005 99 aa14.63□□□□□ -0.07
VPS29-207ENST00000549970 KLHL4Q9C0H6 718 aa14.63□□□□□ -0.07
VPS29-207ENST00000549970 SERHL2Q9H4I8 314 aa14.63□□□□□ -0.07
VPS29-207ENST00000549970 ZNF226Q9NYT6 803 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms