RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 DRD5P21918 477 aa17.16■□□□□ 0.34
PRPF40B-208ENST00000548436 GABRA5P31644 462 aa17.16■□□□□ 0.34
PRPF40B-208ENST00000548436 MAZP56270 477 aaKnown RBP17.16■□□□□ 0.34
PRPF40B-208ENST00000548436 ZNF791Q3KP31 576 aaPredicted RBP17.16■□□□□ 0.34
PRPF40B-208ENST00000548436 LRIT3Q3SXY7 679 aa17.16■□□□□ 0.34
PRPF40B-208ENST00000548436 PDZK1Q5T2W1 519 aa17.16■□□□□ 0.34
PRPF40B-208ENST00000548436 DESI1Q6ICB0 168 aa17.16■□□□□ 0.34
PRPF40B-208ENST00000548436 PLBD1Q6P4A8 553 aa17.16■□□□□ 0.34
PRPF40B-208ENST00000548436 SIRT6Q8N6T7 355 aa17.16■□□□□ 0.34
PRPF40B-208ENST00000548436 OR4N2Q8NGD1 307 aa17.16■□□□□ 0.34
PRPF40B-208ENST00000548436 ITPKCQ96DU7 683 aa17.16■□□□□ 0.34
PRPF40B-208ENST00000548436 KLHDC7BQ96G42 594 aa17.16■□□□□ 0.34
PRPF40B-208ENST00000548436 WDFY2Q96P53 400 aa17.16■□□□□ 0.34
PRPF40B-208ENST00000548436 ZNF576Q9H609 170 aa17.16■□□□□ 0.34
PRPF40B-208ENST00000548436 MED20Q9H944 212 aa17.16■□□□□ 0.34
PRPF40B-208ENST00000548436 SACM1LQ9NTJ5 587 aa17.16■□□□□ 0.34
PRPF40B-208ENST00000548436 H2AFY2Q9P0M6 372 aaPredicted RBP17.16■□□□□ 0.34
PRPF40B-208ENST00000548436 HCN3Q9P1Z3 774 aa17.16■□□□□ 0.34
PRPF40B-208ENST00000548436 MUTYHQ9UIF7 546 aa17.16■□□□□ 0.34
PRPF40B-208ENST00000548436 SMIM30A4D0T7 59 aa17.15■□□□□ 0.34
PRPF40B-208ENST00000548436 J3QRE1 110 aa17.15■□□□□ 0.34
PRPF40B-208ENST00000548436 HRKO00198 91 aa17.15■□□□□ 0.34
PRPF40B-208ENST00000548436 IGKV1D-16P01601 117 aa17.15■□□□□ 0.34
PRPF40B-208ENST00000548436 GLULP15104 373 aa17.15■□□□□ 0.34
PRPF40B-208ENST00000548436 FZD5Q13467 585 aa17.15■□□□□ 0.34
PRPF40B-208ENST00000548436 ZNF79Q15937 498 aa17.15■□□□□ 0.34
PRPF40B-208ENST00000548436 SLC35F1Q5T1Q4 408 aa17.15■□□□□ 0.34
PRPF40B-208ENST00000548436 CD200R1LQ6Q8B3 271 aa17.15■□□□□ 0.34
PRPF40B-208ENST00000548436 SMARCD3Q6STE5 483 aa17.15■□□□□ 0.34
PRPF40B-208ENST00000548436 THSD4Q6ZMP0 1018 aa17.15■□□□□ 0.34
PRPF40B-208ENST00000548436 TMPRSS11AQ6ZMR5 421 aa17.15■□□□□ 0.34
PRPF40B-208ENST00000548436 PARGQ86W56 976 aa17.15■□□□□ 0.34
PRPF40B-208ENST00000548436 PMM1Q92871 262 aa17.15■□□□□ 0.34
PRPF40B-208ENST00000548436 HPS1Q92902 700 aa17.15■□□□□ 0.34
PRPF40B-208ENST00000548436 DCLRE1CQ96SD1 692 aaKnown RBP17.15■□□□□ 0.34
PRPF40B-208ENST00000548436 SECISBP2Q96T21 854 aaKnown RBP17.15■□□□□ 0.34
PRPF40B-208ENST00000548436 MEPEQ9NQ76 525 aaPredicted RBP17.15■□□□□ 0.34
PRPF40B-208ENST00000548436 POLE3Q9NRF9 147 aa17.15■□□□□ 0.34
PRPF40B-208ENST00000548436 CMAHPQ9Y471 501 aa17.15■□□□□ 0.34
PRPF40B-208ENST00000548436 MTCH2Q9Y6C9 303 aa17.15■□□□□ 0.34
PRPF40B-208ENST00000548436 PCDH15Q96QU1 1955 aa17.14■□□□□ 0.34
PRPF40B-208ENST00000548436 ZC3H12DA2A288 527 aaKnown RBP17.14■□□□□ 0.33
PRPF40B-208ENST00000548436 SLC35F4A4IF30 521 aa17.14■□□□□ 0.33
PRPF40B-208ENST00000548436 ADAM11O75078 769 aa17.14■□□□□ 0.33
PRPF40B-208ENST00000548436 RFPL3O75679 317 aa17.14■□□□□ 0.33
PRPF40B-208ENST00000548436 SLC9A3P48764 834 aa17.14■□□□□ 0.33
PRPF40B-208ENST00000548436 EMDP50402 254 aa17.14■□□□□ 0.33
PRPF40B-208ENST00000548436 COL19A1Q14993 1142 aa17.14■□□□□ 0.33
PRPF40B-208ENST00000548436 PRTGQ2VWP7 1150 aa17.14■□□□□ 0.33
PRPF40B-208ENST00000548436 AMZ1Q400G9 498 aa17.14■□□□□ 0.33
PRPF40B-208ENST00000548436 CHRDL2Q6WN34 429 aa17.14■□□□□ 0.33
PRPF40B-208ENST00000548436 RBM12BQ8IXT5 1001 aaKnown RBP17.14■□□□□ 0.33
PRPF40B-208ENST00000548436 TDHQ8IZJ6 230 aa17.14■□□□□ 0.33
PRPF40B-208ENST00000548436 OR52L1Q8NGH7 329 aa17.14■□□□□ 0.33
PRPF40B-208ENST00000548436 OR13C2Q8NGS9 318 aa17.14■□□□□ 0.33
PRPF40B-208ENST00000548436 GRHL3Q8TE85 626 aa17.14■□□□□ 0.33
PRPF40B-208ENST00000548436 SPRYD4Q8WW59 207 aaPredicted RBP17.14■□□□□ 0.33
PRPF40B-208ENST00000548436 BPIFA2Q96DR5 249 aa17.14■□□□□ 0.33
PRPF40B-208ENST00000548436 MED18Q9BUE0 208 aa17.14■□□□□ 0.33
PRPF40B-208ENST00000548436 KATNB1Q9BVA0 655 aa17.14■□□□□ 0.33
PRPF40B-208ENST00000548436 HCAR1Q9BXC0 346 aa17.14■□□□□ 0.33
PRPF40B-208ENST00000548436 MIXL1Q9H2W2 232 aa17.14■□□□□ 0.33
PRPF40B-208ENST00000548436 FOLH1BQ9HBA9 442 aa17.14■□□□□ 0.33
PRPF40B-208ENST00000548436 FLRT3Q9NZU0 649 aa17.14■□□□□ 0.33
PRPF40B-208ENST00000548436 TNFRSF10DQ9UBN6 386 aa17.14■□□□□ 0.33
PRPF40B-208ENST00000548436 MN1Q10571 1320 aaPredicted RBP17.14■□□□□ 0.33
PRPF40B-208ENST00000548436 FOXS1O43638 330 aa17.14■□□□□ 0.33
PRPF40B-208ENST00000548436 SSX4O60224 188 aa17.14■□□□□ 0.33
PRPF40B-208ENST00000548436 COQ9O75208 318 aa17.14■□□□□ 0.33
PRPF40B-208ENST00000548436 CDC123O75794 336 aaPredicted RBP17.14■□□□□ 0.33
PRPF40B-208ENST00000548436 FGF9P31371 208 aaPredicted RBP17.14■□□□□ 0.33
PRPF40B-208ENST00000548436 SSTR4P31391 388 aa17.14■□□□□ 0.33
PRPF40B-208ENST00000548436 ATP6V1E1P36543 226 aa17.14■□□□□ 0.33
PRPF40B-208ENST00000548436 BLKP51451 505 aa17.14■□□□□ 0.33
PRPF40B-208ENST00000548436 TMPRSS11FQ6ZWK6 438 aa17.14■□□□□ 0.33
PRPF40B-208ENST00000548436 OR8H2Q8N162 312 aa17.14■□□□□ 0.33
PRPF40B-208ENST00000548436 KLHL36Q8N4N3 616 aa17.14■□□□□ 0.33
PRPF40B-208ENST00000548436 ZNF614Q8N883 585 aa17.14■□□□□ 0.33
PRPF40B-208ENST00000548436 ZBTB8BQ8NAP8 495 aaPredicted RBP17.14■□□□□ 0.33
PRPF40B-208ENST00000548436 PSD4Q8NDX1 1056 aa17.14■□□□□ 0.33
PRPF40B-208ENST00000548436 OR51G2Q8NGK0 314 aa17.14■□□□□ 0.33
PRPF40B-208ENST00000548436 NACC2Q96BF6 587 aa17.14■□□□□ 0.33
PRPF40B-208ENST00000548436 PEX11GQ96HA9 241 aa17.14■□□□□ 0.33
PRPF40B-208ENST00000548436 PTCHD1Q96NR3 888 aa17.14■□□□□ 0.33
PRPF40B-208ENST00000548436 ZNF559Q9BR84 538 aa17.14■□□□□ 0.33
PRPF40B-208ENST00000548436 LMF2Q9BU23 707 aaKnown RBP17.14■□□□□ 0.33
PRPF40B-208ENST00000548436 ABCB9Q9NP78 766 aa17.14■□□□□ 0.33
PRPF40B-208ENST00000548436 TBC1D24Q9ULP9 559 aa17.14■□□□□ 0.33
PRPF40B-208ENST00000548436 SIGLEC7Q9Y286 467 aa17.14■□□□□ 0.33
PRPF40B-208ENST00000548436 DTX4Q9Y2E6 619 aa17.14■□□□□ 0.33
PRPF40B-208ENST00000548436 BMP7P18075 431 aa17.13■□□□□ 0.33
PRPF40B-208ENST00000548436 EIF2B2P49770 351 aaKnown RBP17.13■□□□□ 0.33
PRPF40B-208ENST00000548436 DEFA1P59665 94 aa17.13■□□□□ 0.33
PRPF40B-208ENST00000548436 DEFA3P59666 94 aa17.13■□□□□ 0.33
PRPF40B-208ENST00000548436 MAT1AQ00266 395 aaKnown RBP17.13■□□□□ 0.33
PRPF40B-208ENST00000548436 ERV3-1Q14264 604 aa17.13■□□□□ 0.33
PRPF40B-208ENST00000548436 GARNL3Q5VVW2 1013 aa17.13■□□□□ 0.33
PRPF40B-208ENST00000548436 NIPAL3Q6P499 406 aa17.13■□□□□ 0.33
PRPF40B-208ENST00000548436 ZNF613Q6PF04 617 aa17.13■□□□□ 0.33
PRPF40B-208ENST00000548436 CCBE1Q6UXH8 406 aaPredicted RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms