RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 ZNF764Q96H86 408 aaPredicted RBP18.18■□□□□ 0.5
SSH1-207ENST00000547862 REXO5Q96IC2 774 aaKnown RBP18.18■□□□□ 0.5
SSH1-207ENST00000547862 METTL2AQ96IZ6 378 aaKnown RBP18.18■□□□□ 0.5
SSH1-207ENST00000547862 TACO1Q9BSH4 297 aaKnown RBP18.18■□□□□ 0.5
SSH1-207ENST00000547862 SRXN1Q9BYN0 137 aa18.18■□□□□ 0.5
SSH1-207ENST00000547862 CXorf56Q9H5V9 222 aa18.18■□□□□ 0.5
SSH1-207ENST00000547862 SIRT3Q9NTG7 399 aaPredicted RBP18.18■□□□□ 0.5
SSH1-207ENST00000547862 ACSS1Q9NUB1 689 aaPredicted RBP18.18■□□□□ 0.5
SSH1-207ENST00000547862 MID2Q9UJV3 735 aa18.18■□□□□ 0.5
SSH1-207ENST00000547862 FREM1Q5H8C1 2179 aa18.18■□□□□ 0.5
SSH1-207ENST00000547862 C7orf72A4D263 438 aa18.17■□□□□ 0.5
SSH1-207ENST00000547862 NPIPB8E9PQR5 432 aa18.17■□□□□ 0.5
SSH1-207ENST00000547862 HS3ST1O14792 307 aa18.17■□□□□ 0.5
SSH1-207ENST00000547862 PIP5K1BO14986 540 aa18.17■□□□□ 0.5
SSH1-207ENST00000547862 CLOCKO15516 846 aa18.17■□□□□ 0.5
SSH1-207ENST00000547862 OIP5O43482 229 aa18.17■□□□□ 0.5
SSH1-207ENST00000547862 CHRNGP07510 517 aa18.17■□□□□ 0.5
SSH1-207ENST00000547862 ATP6V1C1P21283 382 aa18.17■□□□□ 0.5
SSH1-207ENST00000547862 FRKP42685 505 aaPredicted RBP18.17■□□□□ 0.5
SSH1-207ENST00000547862 SERPINB4P48594 390 aa18.17■□□□□ 0.5
SSH1-207ENST00000547862 TP53BP2Q13625 1128 aa18.17■□□□□ 0.5
SSH1-207ENST00000547862 ZNF239Q16600 458 aaKnown RBP18.17■□□□□ 0.5
SSH1-207ENST00000547862 MISPQ8IVT2 679 aa18.17■□□□□ 0.5
SSH1-207ENST00000547862 TMCO5AQ8N6Q1 288 aa18.17■□□□□ 0.5
SSH1-207ENST00000547862 OR7A2PQ8NGA2 310 aa18.17■□□□□ 0.5
SSH1-207ENST00000547862 RFWD2Q8NHY2 731 aa18.17■□□□□ 0.5
SSH1-207ENST00000547862 RAB3IL1Q8TBN0 382 aa18.17■□□□□ 0.5
SSH1-207ENST00000547862 FAM110BQ8TC76 370 aa18.17■□□□□ 0.5
SSH1-207ENST00000547862 ACTRT2Q8TDY3 377 aa18.17■□□□□ 0.5
SSH1-207ENST00000547862 AKAP1Q92667 903 aaKnown RBP eCLIP18.17■□□□□ 0.5
SSH1-207ENST00000547862 OSTF1Q92882 214 aa18.17■□□□□ 0.5
SSH1-207ENST00000547862 S100PBPQ96BU1 408 aa18.17■□□□□ 0.5
SSH1-207ENST00000547862 C1orf50Q9BV19 199 aa18.17■□□□□ 0.5
SSH1-207ENST00000547862 BTBD2Q9BX70 525 aa18.17■□□□□ 0.5
SSH1-207ENST00000547862 HHATLQ9HCP6 504 aa18.17■□□□□ 0.5
SSH1-207ENST00000547862 NUP214P35658 2090 aaPredicted RBP18.16■□□□□ 0.5
SSH1-207ENST00000547862 KIAA1324LA8MWY0 1029 aaPredicted RBP18.16■□□□□ 0.5
SSH1-207ENST00000547862 SCAMP2O15127 329 aaKnown RBP18.16■□□□□ 0.5
SSH1-207ENST00000547862 ADAMDEC1O15204 470 aa18.16■□□□□ 0.5
SSH1-207ENST00000547862 TBX19O60806 448 aa18.16■□□□□ 0.5
SSH1-207ENST00000547862 HMGN2P05204 90 aaKnown RBP18.16■□□□□ 0.5
SSH1-207ENST00000547862 BCKDHAP12694 445 aa18.16■□□□□ 0.5
SSH1-207ENST00000547862 ASMTP46597 345 aa18.16■□□□□ 0.5
SSH1-207ENST00000547862 CCR4P51679 360 aa18.16■□□□□ 0.5
SSH1-207ENST00000547862 CARD18P57730 90 aa18.16■□□□□ 0.5
SSH1-207ENST00000547862 CAPRIN1Q14444 709 aaKnown RBP18.16■□□□□ 0.5
SSH1-207ENST00000547862 SPDYE7PQ495Y7 208 aa18.16■□□□□ 0.5
SSH1-207ENST00000547862 TMEM201Q5SNT2 666 aa18.16■□□□□ 0.5
SSH1-207ENST00000547862 CDC73Q6P1J9 531 aa18.16■□□□□ 0.5
SSH1-207ENST00000547862 LRIG3Q6UXM1 1119 aa18.16■□□□□ 0.5
SSH1-207ENST00000547862 NUFIP2Q7Z417 695 aaKnown RBP18.16■□□□□ 0.5
SSH1-207ENST00000547862 TRABD2AQ86V40 505 aa18.16■□□□□ 0.5
SSH1-207ENST00000547862 MECRQ9BV79 373 aa18.16■□□□□ 0.5
SSH1-207ENST00000547862 GLRX2Q9NS18 164 aa18.16■□□□□ 0.5
SSH1-207ENST00000547862 NTMQ9P121 344 aa18.16■□□□□ 0.5
SSH1-207ENST00000547862 LAMP3Q9UQV4 416 aa18.16■□□□□ 0.5
SSH1-207ENST00000547862 DNAJC15Q9Y5T4 150 aa18.16■□□□□ 0.5
SSH1-207ENST00000547862 IGHV3-15A0A0B4J1V0 119 aa18.15■□□□□ 0.5
SSH1-207ENST00000547862 KIF2AO00139 706 aaPredicted RBP18.15■□□□□ 0.5
SSH1-207ENST00000547862 LINGO3P0C6S8 592 aa18.15■□□□□ 0.5
SSH1-207ENST00000547862 IL32P24001 234 aa18.15■□□□□ 0.5
SSH1-207ENST00000547862 SOAT1P35610 550 aa18.15■□□□□ 0.5
SSH1-207ENST00000547862 CBLN3Q6UW01 205 aa18.15■□□□□ 0.5
SSH1-207ENST00000547862 R3HCC1LQ7Z5L2 792 aaKnown RBP18.15■□□□□ 0.5
SSH1-207ENST00000547862 TUSC5Q8IXB3 177 aa18.15■□□□□ 0.5
SSH1-207ENST00000547862 FBXO27Q8NI29 283 aa18.15■□□□□ 0.5
SSH1-207ENST00000547862 RNF128Q8TEB7 428 aa18.15■□□□□ 0.5
SSH1-207ENST00000547862 CARD8Q9Y2G2 431 aa18.15■□□□□ 0.5
SSH1-207ENST00000547862 GPR52Q9Y2T5 361 aa18.15■□□□□ 0.5
SSH1-207ENST00000547862 TMED5Q9Y3A6 229 aa18.15■□□□□ 0.5
SSH1-207ENST00000547862 JMJD1CQ15652 2540 aa18.15■□□□□ 0.5
SSH1-207ENST00000547862 HIVEP2P31629 2446 aa18.14■□□□□ 0.5
SSH1-207ENST00000547862 A0A1W2PQD3 144 aa18.14■□□□□ 0.49
SSH1-207ENST00000547862 TRIM13O60858 407 aa18.14■□□□□ 0.49
SSH1-207ENST00000547862 SKAP2O75563 359 aaPredicted RBP18.14■□□□□ 0.49
SSH1-207ENST00000547862 PSMB1P20618 241 aaKnown RBP18.14■□□□□ 0.49
SSH1-207ENST00000547862 VEZF1Q14119 521 aa18.14■□□□□ 0.49
SSH1-207ENST00000547862 DCST2Q5T1A1 773 aa18.14■□□□□ 0.49
SSH1-207ENST00000547862 GTF2IRD2BQ6EKJ0 949 aa18.14■□□□□ 0.49
SSH1-207ENST00000547862 ZCCHC12Q6PEW1 402 aa18.14■□□□□ 0.49
SSH1-207ENST00000547862 TFAP2EQ6VUC0 442 aa18.14■□□□□ 0.49
SSH1-207ENST00000547862 ZCCHC23Q6ZST2 131 aa18.14■□□□□ 0.49
SSH1-207ENST00000547862 GTF2IRD2Q86UP8 949 aa18.14■□□□□ 0.49
SSH1-207ENST00000547862 CNPY4Q8N129 248 aa18.14■□□□□ 0.49
SSH1-207ENST00000547862 BANPQ8N9N5 519 aa18.14■□□□□ 0.49
SSH1-207ENST00000547862 ZNF527Q8NB42 609 aa18.14■□□□□ 0.49
SSH1-207ENST00000547862 MAPK1IP1LQ8NDC0 245 aa18.14■□□□□ 0.49
SSH1-207ENST00000547862 OR5AK3PQ8NH89 298 aa18.14■□□□□ 0.49
SSH1-207ENST00000547862 CPNE4Q96A23 557 aaPredicted RBP18.14■□□□□ 0.49
SSH1-207ENST00000547862 KLHL13Q9P2N7 655 aa18.14■□□□□ 0.49
SSH1-207ENST00000547862 CR1P17927 2039 aa18.13■□□□□ 0.49
SSH1-207ENST00000547862 TLDC2A0PJX2 215 aa18.13■□□□□ 0.49
SSH1-207ENST00000547862 TMEM114B3SHH9 223 aa18.13■□□□□ 0.49
SSH1-207ENST00000547862 GTPBP1O00178 669 aaKnown RBP18.13■□□□□ 0.49
SSH1-207ENST00000547862 PEX11AO75192 247 aa18.13■□□□□ 0.49
SSH1-207ENST00000547862 C6orf47O95873 294 aa18.13■□□□□ 0.49
SSH1-207ENST00000547862 LAMP1P11279 417 aa18.13■□□□□ 0.49
SSH1-207ENST00000547862 DDX5P17844 614 aaKnown RBP18.13■□□□□ 0.49
SSH1-207ENST00000547862 ELK4P28324 431 aa18.13■□□□□ 0.49
SSH1-207ENST00000547862 ALDH3A1P30838 453 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms