RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 P2RX1P51575 399 aa14.34□□□□□ -0.11
DDX54-204ENST00000546898 RPS3AP61247 264 aaKnown RBP14.34□□□□□ -0.11
DDX54-204ENST00000546898 EEF1A1P68104 462 aaKnown RBP14.34□□□□□ -0.11
DDX54-204ENST00000546898 ZNF141Q15928 474 aa14.34□□□□□ -0.11
DDX54-204ENST00000546898 PLPPR5Q32ZL2 321 aa14.34□□□□□ -0.11
DDX54-204ENST00000546898 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.34□□□□□ -0.11
DDX54-204ENST00000546898 EEF1A1P5Q5VTE0 462 aa14.34□□□□□ -0.11
DDX54-204ENST00000546898 OR2A2Q6IF42 318 aa14.34□□□□□ -0.11
DDX54-204ENST00000546898 TNFAIP8L2Q6P589 184 aaPredicted RBP14.34□□□□□ -0.11
DDX54-204ENST00000546898 MIER2Q8N344 545 aa14.34□□□□□ -0.11
DDX54-204ENST00000546898 METTL25Q8N6Q8 603 aa14.34□□□□□ -0.11
DDX54-204ENST00000546898 OR5M1Q8NGP8 315 aa14.34□□□□□ -0.11
DDX54-204ENST00000546898 MARK4Q96L34 752 aa14.34□□□□□ -0.11
DDX54-204ENST00000546898 TCF7L2Q9NQB0 619 aa14.34□□□□□ -0.11
DDX54-204ENST00000546898 MED17Q9NVC6 651 aa14.34□□□□□ -0.11
DDX54-204ENST00000546898 ZNF175Q9Y473 711 aa14.34□□□□□ -0.11
DDX54-204ENST00000546898 CREBBPQ92793 2442 aa14.34□□□□□ -0.11
DDX54-204ENST00000546898 CCDC154A6NI56 674 aa14.33□□□□□ -0.12
DDX54-204ENST00000546898 SEC14L5O43304 696 aa14.33□□□□□ -0.12
DDX54-204ENST00000546898 KIAA0513O60268 411 aa14.33□□□□□ -0.12
DDX54-204ENST00000546898 EIF4E2O60573 245 aaKnown RBP14.33□□□□□ -0.12
DDX54-204ENST00000546898 TNFRSF21O75509 655 aa14.33□□□□□ -0.12
DDX54-204ENST00000546898 SASH3O75995 380 aa14.33□□□□□ -0.12
DDX54-204ENST00000546898 CRHP06850 196 aa14.33□□□□□ -0.12
DDX54-204ENST00000546898 OR12D1P0DN82 309 aa14.33□□□□□ -0.12
DDX54-204ENST00000546898 EIF1P41567 113 aaKnown RBP14.33□□□□□ -0.12
DDX54-204ENST00000546898 MAGEA8P43361 318 aa14.33□□□□□ -0.12
DDX54-204ENST00000546898 STX1BP61266 288 aa14.33□□□□□ -0.12
DDX54-204ENST00000546898 GPR68Q15743 365 aa14.33□□□□□ -0.12
DDX54-204ENST00000546898 AP1ARQ63HQ0 302 aa14.33□□□□□ -0.12
DDX54-204ENST00000546898 P4HA3Q7Z4N8 544 aa14.33□□□□□ -0.12
DDX54-204ENST00000546898 ZNF295-AS1Q8N0V1 137 aa14.33□□□□□ -0.12
DDX54-204ENST00000546898 ZNF614Q8N883 585 aa14.33□□□□□ -0.12
DDX54-204ENST00000546898 TOR1AIP2Q8NFQ8 470 aa14.33□□□□□ -0.12
DDX54-204ENST00000546898 CKAP2Q8WWK9 683 aa14.33□□□□□ -0.12
DDX54-204ENST00000546898 XAGE5Q8WWM1 108 aa14.33□□□□□ -0.12
DDX54-204ENST00000546898 MAGEB18Q96M61 343 aa14.33□□□□□ -0.12
DDX54-204ENST00000546898 CCDC28BQ9BUN5 200 aa14.33□□□□□ -0.12
DDX54-204ENST00000546898 RMND5AQ9H871 391 aa14.33□□□□□ -0.12
DDX54-204ENST00000546898 PAQR5Q9NXK6 330 aaPredicted RBP14.33□□□□□ -0.12
DDX54-204ENST00000546898 KCNN3Q9UGI6 736 aa14.33□□□□□ -0.12
DDX54-204ENST00000546898 ICAM5Q9UMF0 924 aa14.33□□□□□ -0.12
DDX54-204ENST00000546898 SERINC4A6NH21 518 aa14.32□□□□□ -0.12
DDX54-204ENST00000546898 SLC22A20A6NK97 555 aa14.32□□□□□ -0.12
DDX54-204ENST00000546898 SHISA8B8ZZ34 492 aa14.32□□□□□ -0.12
DDX54-204ENST00000546898 GTPBP1O00178 669 aaKnown RBP14.32□□□□□ -0.12
DDX54-204ENST00000546898 SYT5O00445 386 aa14.32□□□□□ -0.12
DDX54-204ENST00000546898 RFXANKO14593 260 aa14.32□□□□□ -0.12
DDX54-204ENST00000546898 ZNF264O43296 627 aa14.32□□□□□ -0.12
DDX54-204ENST00000546898 UGT2B17O75795 530 aa14.32□□□□□ -0.12
DDX54-204ENST00000546898 KRT75O95678 551 aa14.32□□□□□ -0.12
DDX54-204ENST00000546898 LINGO3P0C6S8 592 aa14.32□□□□□ -0.12
DDX54-204ENST00000546898 UBL4AP11441 157 aa14.32□□□□□ -0.12
DDX54-204ENST00000546898 PSMA4P25789 261 aaKnown RBP14.32□□□□□ -0.12
DDX54-204ENST00000546898 ELK4P28324 431 aa14.32□□□□□ -0.12
DDX54-204ENST00000546898 ADH6P28332 368 aa14.32□□□□□ -0.12
DDX54-204ENST00000546898 CDKN2CP42773 168 aa14.32□□□□□ -0.12
DDX54-204ENST00000546898 POLR2JP52435 117 aaKnown RBP14.32□□□□□ -0.12
DDX54-204ENST00000546898 SUCLG1P53597 346 aaKnown RBP14.32□□□□□ -0.12
DDX54-204ENST00000546898 CLDN15P56746 228 aa14.32□□□□□ -0.12
DDX54-204ENST00000546898 CLDN20P56880 219 aa14.32□□□□□ -0.12
DDX54-204ENST00000546898 RAC1P63000 192 aa14.32□□□□□ -0.12
DDX54-204ENST00000546898 IRX1P78414 480 aaPredicted RBP14.32□□□□□ -0.12
DDX54-204ENST00000546898 HPCAP84074 193 aa14.32□□□□□ -0.12
DDX54-204ENST00000546898 PDZK1Q5T2W1 519 aa14.32□□□□□ -0.12
DDX54-204ENST00000546898 CBLN3Q6UW01 205 aa14.32□□□□□ -0.12
DDX54-204ENST00000546898 ZNF621Q6ZSS3 439 aa14.32□□□□□ -0.12
DDX54-204ENST00000546898 GGNQ86UU5 652 aa14.32□□□□□ -0.12
DDX54-204ENST00000546898 RNF130Q86XS8 419 aa14.32□□□□□ -0.12
DDX54-204ENST00000546898 STON2Q8WXE9 905 aa14.32□□□□□ -0.12
DDX54-204ENST00000546898 SMPDL3BQ92485 455 aa14.32□□□□□ -0.12
DDX54-204ENST00000546898 RAB8BQ92930 207 aa14.32□□□□□ -0.12
DDX54-204ENST00000546898 RNASE6Q93091 150 aaKnown RBP14.32□□□□□ -0.12
DDX54-204ENST00000546898 ROPN1LQ96C74 230 aa14.32□□□□□ -0.12
DDX54-204ENST00000546898 ARSGQ96EG1 525 aa14.32□□□□□ -0.12
DDX54-204ENST00000546898 RNF145Q96MT1 663 aa14.32□□□□□ -0.12
DDX54-204ENST00000546898 INPP5KQ9BT40 448 aa14.32□□□□□ -0.12
DDX54-204ENST00000546898 SAP130Q9H0E3 1048 aa14.32□□□□□ -0.12
DDX54-204ENST00000546898 MKLN1Q9UL63 735 aa14.32□□□□□ -0.12
DDX54-204ENST00000546898 LIPT1Q9Y234 373 aa14.32□□□□□ -0.12
DDX54-204ENST00000546898 CARD8Q9Y2G2 431 aa14.32□□□□□ -0.12
DDX54-204ENST00000546898 WDR45Q9Y484 360 aa14.32□□□□□ -0.12
DDX54-204ENST00000546898 LRBAP50851 2863 aa14.32□□□□□ -0.12
DDX54-204ENST00000546898 FAM234BA2RU67 622 aa14.31□□□□□ -0.12
DDX54-204ENST00000546898 HMGN4O00479 90 aa14.31□□□□□ -0.12
DDX54-204ENST00000546898 FCMRO60667 390 aa14.31□□□□□ -0.12
DDX54-204ENST00000546898 NUDT14O95848 222 aa14.31□□□□□ -0.12
DDX54-204ENST00000546898 TGM6O95932 706 aa14.31□□□□□ -0.12
DDX54-204ENST00000546898 ZCCHC18P0CG32 403 aa14.31□□□□□ -0.12
DDX54-204ENST00000546898 FCGR2AP12318 317 aa14.31□□□□□ -0.12
DDX54-204ENST00000546898 ME2P23368 584 aa14.31□□□□□ -0.12
DDX54-204ENST00000546898 IDH3AP50213 366 aa14.31□□□□□ -0.12
DDX54-204ENST00000546898 AQP5P55064 265 aa14.31□□□□□ -0.12
DDX54-204ENST00000546898 CASP9P55211 416 aa14.31□□□□□ -0.12
DDX54-204ENST00000546898 DLX5P56178 289 aa14.31□□□□□ -0.12
DDX54-204ENST00000546898 FUT5Q11128 374 aa14.31□□□□□ -0.12
DDX54-204ENST00000546898 TIGD2Q4W5G0 525 aa14.31□□□□□ -0.12
DDX54-204ENST00000546898 TYW3Q6IPR3 259 aaKnown RBP14.31□□□□□ -0.12
DDX54-204ENST00000546898 FRRS1Q6ZNA5 592 aa14.31□□□□□ -0.12
DDX54-204ENST00000546898 ZNF619Q8N2I2 560 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms