RNA–Protein interactions for RNA: ENST00000546697.1

SSH1-204, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-204ENST00000546697 RNF122Q9H9V4 155 aa13.81□□□□□ -0.2
SSH1-204ENST00000546697 PAQR5Q9NXK6 330 aaPredicted RBP13.81□□□□□ -0.2
SSH1-204ENST00000546697 MARCOQ9UEW3 520 aaPredicted RBP13.81□□□□□ -0.2
SSH1-204ENST00000546697 KCNE5Q9UJ90 142 aa13.81□□□□□ -0.2
SSH1-204ENST00000546697 RPH3AQ9Y2J0 694 aaPredicted RBP13.81□□□□□ -0.2
SSH1-204ENST00000546697 POLQO75417 2590 aa13.81□□□□□ -0.2
SSH1-204ENST00000546697 KIAA0513O60268 411 aa13.8□□□□□ -0.2
SSH1-204ENST00000546697 STX11O75558 287 aa13.8□□□□□ -0.2
SSH1-204ENST00000546697 GOSR1O95249 250 aa13.8□□□□□ -0.2
SSH1-204ENST00000546697 TGM6O95932 706 aa13.8□□□□□ -0.2
SSH1-204ENST00000546697 TMIGD3P0DMS9 266 aaPredicted RBP13.8□□□□□ -0.2
SSH1-204ENST00000546697 HPGDP15428 266 aa13.8□□□□□ -0.2
SSH1-204ENST00000546697 POU3F2P20265 443 aaPredicted RBP13.8□□□□□ -0.2
SSH1-204ENST00000546697 BMP5P22003 454 aa13.8□□□□□ -0.2
SSH1-204ENST00000546697 P2RX1P51575 399 aa13.8□□□□□ -0.2
SSH1-204ENST00000546697 FUT5Q11128 374 aa13.8□□□□□ -0.2
SSH1-204ENST00000546697 FLYWCH1Q4VC44 716 aa13.8□□□□□ -0.2
SSH1-204ENST00000546697 SLC35G5Q96KT7 338 aa13.8□□□□□ -0.2
SSH1-204ENST00000546697 LURAP1Q96LR2 239 aa13.8□□□□□ -0.2
SSH1-204ENST00000546697 OR52B2Q96RD2 323 aa13.8□□□□□ -0.2
SSH1-204ENST00000546697 KLHDC3Q9BQ90 382 aa13.8□□□□□ -0.2
SSH1-204ENST00000546697 PIGMQ9H3S5 423 aa13.8□□□□□ -0.2
SSH1-204ENST00000546697 EXD2Q9NVH0 621 aa13.8□□□□□ -0.2
SSH1-204ENST00000546697 ARGLU1Q9NWB6 273 aaPredicted RBP13.8□□□□□ -0.2
SSH1-204ENST00000546697 STOML1Q9UBI4 398 aa13.8□□□□□ -0.2
SSH1-204ENST00000546697 PRDM4Q9UKN5 801 aa13.8□□□□□ -0.2
SSH1-204ENST00000546697 GMEB1Q9Y692 573 aa13.8□□□□□ -0.2
SSH1-204ENST00000546697 USH1CQ9Y6N9 552 aa13.8□□□□□ -0.2
SSH1-204ENST00000546697 HRNRQ86YZ3 2850 aaPredicted RBP13.8□□□□□ -0.2
SSH1-204ENST00000546697 GOLGA8QA0A0J9YX86 632 aa13.79□□□□□ -0.2
SSH1-204ENST00000546697 PRAMEF27A3QJZ7 478 aa13.79□□□□□ -0.2
SSH1-204ENST00000546697 GOLGA8OA6NCC3 632 aa13.79□□□□□ -0.2
SSH1-204ENST00000546697 GOLGA8NF8WBI6 632 aa13.79□□□□□ -0.2
SSH1-204ENST00000546697 H3BNH8 94 aa13.79□□□□□ -0.2
SSH1-204ENST00000546697 FCMRO60667 390 aa13.79□□□□□ -0.2
SSH1-204ENST00000546697 SLC22A3O75751 556 aa13.79□□□□□ -0.2
SSH1-204ENST00000546697 UGT2B17O75795 530 aa13.79□□□□□ -0.2
SSH1-204ENST00000546697 MVDP53602 400 aa13.79□□□□□ -0.2
SSH1-204ENST00000546697 CLDN20P56880 219 aa13.79□□□□□ -0.2
SSH1-204ENST00000546697 FOXF2Q12947 444 aa13.79□□□□□ -0.2
SSH1-204ENST00000546697 CBLN3Q6UW01 205 aa13.79□□□□□ -0.2
SSH1-204ENST00000546697 ANKRD46Q86W74 232 aa13.79□□□□□ -0.2
SSH1-204ENST00000546697 TRIML2Q8N7C3 387 aa13.79□□□□□ -0.2
SSH1-204ENST00000546697 GPR119Q8TDV5 335 aa13.79□□□□□ -0.2
SSH1-204ENST00000546697 LRRC46Q96FV0 321 aa13.79□□□□□ -0.2
SSH1-204ENST00000546697 NPAS1Q99742 590 aa13.79□□□□□ -0.2
SSH1-204ENST00000546697 SLC35A5Q9BS91 424 aa13.79□□□□□ -0.2
SSH1-204ENST00000546697 OR51I1Q9H343 314 aa13.79□□□□□ -0.2
SSH1-204ENST00000546697 GPC6Q9Y625 555 aaPredicted RBP13.79□□□□□ -0.2
SSH1-204ENST00000546697 A0A1W2PNV4 684 aa13.78□□□□□ -0.2
SSH1-204ENST00000546697 SERINC4A6NH21 518 aa13.78□□□□□ -0.2
SSH1-204ENST00000546697 CCDC154A6NI56 674 aa13.78□□□□□ -0.2
SSH1-204ENST00000546697 SLC22A20A6NK97 555 aa13.78□□□□□ -0.2
SSH1-204ENST00000546697 HMGN4O00479 90 aa13.78□□□□□ -0.2
SSH1-204ENST00000546697 MSTNO14793 375 aa13.78□□□□□ -0.2
SSH1-204ENST00000546697 CGAP01215 116 aa13.78□□□□□ -0.2
SSH1-204ENST00000546697 KITP10721 976 aa13.78□□□□□ -0.2
SSH1-204ENST00000546697 HOXB9P17482 250 aaPredicted RBP13.78□□□□□ -0.2
SSH1-204ENST00000546697 IL11P20809 199 aa13.78□□□□□ -0.2
SSH1-204ENST00000546697 SOAT1P35610 550 aa13.78□□□□□ -0.2
SSH1-204ENST00000546697 ZNF41P51814 821 aaPredicted RBP13.78□□□□□ -0.2
SSH1-204ENST00000546697 DGKQP52824 942 aa13.78□□□□□ -0.2
SSH1-204ENST00000546697 RPS26P62854 115 aaKnown RBP13.78□□□□□ -0.2
SSH1-204ENST00000546697 SRYQ05066 204 aa13.78□□□□□ -0.2
SSH1-204ENST00000546697 SKP2Q13309 424 aa13.78□□□□□ -0.2
SSH1-204ENST00000546697 FGFBP1Q14512 234 aa13.78□□□□□ -0.2
SSH1-204ENST00000546697 DAZAP2Q15038 168 aaPredicted RBP13.78□□□□□ -0.2
SSH1-204ENST00000546697 TYW3Q6IPR3 259 aaKnown RBP13.78□□□□□ -0.2
SSH1-204ENST00000546697 FRRS1Q6ZNA5 592 aa13.78□□□□□ -0.2
SSH1-204ENST00000546697 ESPNLQ6ZVH7 1005 aa13.78□□□□□ -0.2
SSH1-204ENST00000546697 GRAMD2AQ8IUY3 354 aa13.78□□□□□ -0.2
SSH1-204ENST00000546697 OR5W2Q8NH69 310 aa13.78□□□□□ -0.2
SSH1-204ENST00000546697 MRGPRX4Q96LA9 322 aa13.78□□□□□ -0.2
SSH1-204ENST00000546697 TRNT1Q96Q11 434 aaKnown RBP13.78□□□□□ -0.2
SSH1-204ENST00000546697 OR52E6Q96RD3 313 aa13.78□□□□□ -0.2
SSH1-204ENST00000546697 PANX1Q96RD7 426 aa13.78□□□□□ -0.2
SSH1-204ENST00000546697 CCDC28BQ9BUN5 200 aa13.78□□□□□ -0.2
SSH1-204ENST00000546697 LAT2Q9GZY6 243 aa13.78□□□□□ -0.2
SSH1-204ENST00000546697 SLCO1B3Q9NPD5 702 aa13.78□□□□□ -0.2
SSH1-204ENST00000546697 LIPT1Q9Y234 373 aa13.78□□□□□ -0.2
SSH1-204ENST00000546697 A8MXE2 369 aa13.77□□□□□ -0.21
SSH1-204ENST00000546697 H0YC42 278 aa13.77□□□□□ -0.21
SSH1-204ENST00000546697 UBDO15205 165 aa13.77□□□□□ -0.21
SSH1-204ENST00000546697 ZNF264O43296 627 aa13.77□□□□□ -0.21
SSH1-204ENST00000546697 OIP5O43482 229 aa13.77□□□□□ -0.21
SSH1-204ENST00000546697 EFNA2O43921 213 aa13.77□□□□□ -0.21
SSH1-204ENST00000546697 SNRPB2P08579 225 aaKnown RBP13.77□□□□□ -0.21
SSH1-204ENST00000546697 CD8BP10966 210 aa13.77□□□□□ -0.21
SSH1-204ENST00000546697 FCGR2AP12318 317 aa13.77□□□□□ -0.21
SSH1-204ENST00000546697 PRKCAP17252 672 aa13.77□□□□□ -0.21
SSH1-204ENST00000546697 RPS4Y1P22090 263 aaKnown RBP13.77□□□□□ -0.21
SSH1-204ENST00000546697 CDKN2CP42773 168 aa13.77□□□□□ -0.21
SSH1-204ENST00000546697 KIR2DL2P43627 348 aaPredicted RBP13.77□□□□□ -0.21
SSH1-204ENST00000546697 KHKP50053 298 aa13.77□□□□□ -0.21
SSH1-204ENST00000546697 TPD52P55327 224 aaPredicted RBP13.77□□□□□ -0.21
SSH1-204ENST00000546697 RPS3AP61247 264 aaKnown RBP13.77□□□□□ -0.21
SSH1-204ENST00000546697 PLAURQ03405 335 aa13.77□□□□□ -0.21
SSH1-204ENST00000546697 TLE4Q04727 773 aa13.77□□□□□ -0.21
SSH1-204ENST00000546697 KIF18BQ86Y91 864 aa13.77□□□□□ -0.21
SSH1-204ENST00000546697 CLEC4FQ8N1N0 589 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms