RNA–Protein interactions for RNA: ENST00000546534.1

SCAF11-208, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-208ENST00000546534 OR2L13Q8N349 312 aa11.26□□□□□ -0.61
SCAF11-208ENST00000546534 CDYL2Q8N8U2 506 aa11.26□□□□□ -0.61
SCAF11-208ENST00000546534 OR2W6PQ8NHA6 318 aa11.26□□□□□ -0.61
SCAF11-208ENST00000546534 ACTRT2Q8TDY3 377 aa11.26□□□□□ -0.61
SCAF11-208ENST00000546534 PIK3R3Q92569 461 aa11.26□□□□□ -0.61
SCAF11-208ENST00000546534 CPNE4Q96A23 557 aaPredicted RBP11.26□□□□□ -0.61
SCAF11-208ENST00000546534 MSI2Q96DH6 328 aaKnown RBP11.26□□□□□ -0.61
SCAF11-208ENST00000546534 MUCL1Q96DR8 90 aa11.26□□□□□ -0.61
SCAF11-208ENST00000546534 DHRS9Q9BPW9 319 aa11.26□□□□□ -0.61
SCAF11-208ENST00000546534 LMF2Q9BU23 707 aaKnown RBP11.26□□□□□ -0.61
SCAF11-208ENST00000546534 VPS11Q9H270 941 aa11.26□□□□□ -0.61
SCAF11-208ENST00000546534 GP6Q9HCN6 339 aa11.26□□□□□ -0.61
SCAF11-208ENST00000546534 DDX18Q9NVP1 670 aaKnown RBP11.26□□□□□ -0.61
SCAF11-208ENST00000546534 GRHL1Q9NZI5 618 aa11.26□□□□□ -0.61
SCAF11-208ENST00000546534 PRSS50Q9UI38 385 aa11.26□□□□□ -0.61
SCAF11-208ENST00000546534 CCDC188H7C350 402 aa11.25□□□□□ -0.61
SCAF11-208ENST00000546534 EFNA2O43921 213 aa11.25□□□□□ -0.61
SCAF11-208ENST00000546534 SMIM24O75264 130 aa11.25□□□□□ -0.61
SCAF11-208ENST00000546534 LY6HO94772 140 aa11.25□□□□□ -0.61
SCAF11-208ENST00000546534 KCNH1O95259 989 aa11.25□□□□□ -0.61
SCAF11-208ENST00000546534 OXSR1O95747 527 aaPredicted RBP11.25□□□□□ -0.61
SCAF11-208ENST00000546534 RBP1P09455 135 aa11.25□□□□□ -0.61
SCAF11-208ENST00000546534 HSD3B1P14060 373 aa11.25□□□□□ -0.61
SCAF11-208ENST00000546534 HNF1AP20823 631 aa11.25□□□□□ -0.61
SCAF11-208ENST00000546534 EDNRAP25101 427 aa11.25□□□□□ -0.61
SCAF11-208ENST00000546534 HSD3B2P26439 372 aa11.25□□□□□ -0.61
SCAF11-208ENST00000546534 OR3A2P47893 321 aa11.25□□□□□ -0.61
SCAF11-208ENST00000546534 SPOCK1Q08629 439 aa11.25□□□□□ -0.61
SCAF11-208ENST00000546534 ACSM2AQ08AH3 577 aa11.25□□□□□ -0.61
SCAF11-208ENST00000546534 SQLEQ14534 574 aa11.25□□□□□ -0.61
SCAF11-208ENST00000546534 TIMM23BQ5SRD1 257 aa11.25□□□□□ -0.61
SCAF11-208ENST00000546534 ACSM2BQ68CK6 577 aa11.25□□□□□ -0.61
SCAF11-208ENST00000546534 SLC22A25Q6T423 547 aa11.25□□□□□ -0.61
SCAF11-208ENST00000546534 FBXL14Q8N1E6 418 aa11.25□□□□□ -0.61
SCAF11-208ENST00000546534 MUC15Q8N387 334 aa11.25□□□□□ -0.61
SCAF11-208ENST00000546534 ZNF483Q8TF39 744 aaPredicted RBP11.25□□□□□ -0.61
SCAF11-208ENST00000546534 APIPQ96GX9 242 aa11.25□□□□□ -0.61
SCAF11-208ENST00000546534 C1orf159Q96HA4 380 aa11.25□□□□□ -0.61
SCAF11-208ENST00000546534 SH3YL1Q96HL8 342 aaPredicted RBP11.25□□□□□ -0.61
SCAF11-208ENST00000546534 RADILQ96JH8 1075 aa11.25□□□□□ -0.61
SCAF11-208ENST00000546534 ERP44Q9BS26 406 aa11.25□□□□□ -0.61
SCAF11-208ENST00000546534 ACPTQ9BZG2 426 aa11.25□□□□□ -0.61
SCAF11-208ENST00000546534 L2HGDHQ9H9P8 463 aa11.25□□□□□ -0.61
SCAF11-208ENST00000546534 C3orf14Q9HBI5 128 aa11.25□□□□□ -0.61
SCAF11-208ENST00000546534 EML4Q9HC35 981 aaKnown RBP11.25□□□□□ -0.61
SCAF11-208ENST00000546534 TIGARQ9NQ88 270 aa11.25□□□□□ -0.61
SCAF11-208ENST00000546534 TMCO1Q9UM00 188 aa11.25□□□□□ -0.61
SCAF11-208ENST00000546534 FREM1Q5H8C1 2179 aa11.25□□□□□ -0.61
SCAF11-208ENST00000546534 MALRD1Q5VYJ5 2156 aa11.25□□□□□ -0.61
SCAF11-208ENST00000546534 SLITRK5O94991 958 aa11.24□□□□□ -0.61
SCAF11-208ENST00000546534 GGT1P19440 569 aa11.24□□□□□ -0.61
SCAF11-208ENST00000546534 DDCP20711 480 aa11.24□□□□□ -0.61
SCAF11-208ENST00000546534 ENPP1P22413 925 aa11.24□□□□□ -0.61
SCAF11-208ENST00000546534 CFPP27918 469 aa11.24□□□□□ -0.61
SCAF11-208ENST00000546534 TIA1P31483 386 aaKnown RBP eCLIP11.24□□□□□ -0.61
SCAF11-208ENST00000546534 MAGEA4P43358 317 aa11.24□□□□□ -0.61
SCAF11-208ENST00000546534 SERPINB8P50452 374 aa11.24□□□□□ -0.61
SCAF11-208ENST00000546534 FABP6P51161 128 aa11.24□□□□□ -0.61
SCAF11-208ENST00000546534 EFNA4P52798 201 aa11.24□□□□□ -0.61
SCAF11-208ENST00000546534 GGTLC2Q14390 218 aa11.24□□□□□ -0.61
SCAF11-208ENST00000546534 SLC29A2Q14542 456 aa11.24□□□□□ -0.61
SCAF11-208ENST00000546534 UAP1Q16222 522 aaPredicted RBP11.24□□□□□ -0.61
SCAF11-208ENST00000546534 B3GLCTQ6Y288 498 aa11.24□□□□□ -0.61
SCAF11-208ENST00000546534 MEX3DQ86XN8 651 aaKnown RBP11.24□□□□□ -0.61
SCAF11-208ENST00000546534 ELP4Q96EB1 424 aa11.24□□□□□ -0.61
SCAF11-208ENST00000546534 EBPLQ9BY08 206 aa11.24□□□□□ -0.61
SCAF11-208ENST00000546534 SHCBP1LQ9BZQ2 653 aa11.24□□□□□ -0.61
SCAF11-208ENST00000546534 GLIPR2Q9H4G4 154 aa11.24□□□□□ -0.61
SCAF11-208ENST00000546534 CXorf36Q9H7Y0 433 aa11.24□□□□□ -0.61
SCAF11-208ENST00000546534 HHATLQ9HCP6 504 aa11.24□□□□□ -0.61
SCAF11-208ENST00000546534 EQTNQ9NQ60 294 aa11.24□□□□□ -0.61
SCAF11-208ENST00000546534 ING1Q9UK53 422 aaPredicted RBP11.24□□□□□ -0.61
SCAF11-208ENST00000546534 POU2F3Q9UKI9 436 aa11.24□□□□□ -0.61
SCAF11-208ENST00000546534 MGAT4BQ9UQ53 548 aa11.24□□□□□ -0.61
SCAF11-208ENST00000546534 IGHV3-15A0A0B4J1V0 119 aa11.23□□□□□ -0.61
SCAF11-208ENST00000546534 OR5H1A6NKK0 313 aa11.23□□□□□ -0.61
SCAF11-208ENST00000546534 VWC2LB2RUY7 222 aa11.23□□□□□ -0.61
SCAF11-208ENST00000546534 C9JVG2 144 aa11.23□□□□□ -0.61
SCAF11-208ENST00000546534 KCNAB3O43448 404 aa11.23□□□□□ -0.61
SCAF11-208ENST00000546534 KIAA0513O60268 411 aa11.23□□□□□ -0.61
SCAF11-208ENST00000546534 PGM3O95394 542 aa11.23□□□□□ -0.61
SCAF11-208ENST00000546534 KRT6AP02538 564 aa11.23□□□□□ -0.61
SCAF11-208ENST00000546534 KRT6BP04259 564 aa11.23□□□□□ -0.61
SCAF11-208ENST00000546534 NGFRP08138 427 aa11.23□□□□□ -0.61
SCAF11-208ENST00000546534 ANXA4P09525 319 aaPredicted RBP11.23□□□□□ -0.61
SCAF11-208ENST00000546534 CSF3P09919 207 aa11.23□□□□□ -0.61
SCAF11-208ENST00000546534 LINGO3P0C6S8 592 aa11.23□□□□□ -0.61
SCAF11-208ENST00000546534 IGHV1-2P23083 117 aa11.23□□□□□ -0.61
SCAF11-208ENST00000546534 HSD17B3P37058 310 aa11.23□□□□□ -0.61
SCAF11-208ENST00000546534 KRT6CP48668 564 aa11.23□□□□□ -0.61
SCAF11-208ENST00000546534 PRIM2P49643 509 aa11.23□□□□□ -0.61
SCAF11-208ENST00000546534 HTR6P50406 440 aa11.23□□□□□ -0.61
SCAF11-208ENST00000546534 ZNF83P51522 516 aa11.23□□□□□ -0.61
SCAF11-208ENST00000546534 BTKQ06187 659 aa11.23□□□□□ -0.61
SCAF11-208ENST00000546534 C2orf80Q0P641 193 aa11.23□□□□□ -0.61
SCAF11-208ENST00000546534 FOXF1Q12946 379 aa11.23□□□□□ -0.61
SCAF11-208ENST00000546534 TMEM176BQ3YBM2 270 aaPredicted RBP11.23□□□□□ -0.61
SCAF11-208ENST00000546534 GLE1Q53GS7 698 aaKnown RBP11.23□□□□□ -0.61
SCAF11-208ENST00000546534 SPIN4Q56A73 249 aa11.23□□□□□ -0.61
SCAF11-208ENST00000546534 GALNT18Q6P9A2 607 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms