RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 GABRA1P14867 456 aa7.37□□□□□ -1.23
UBR1-202ENST00000546274 SELPP16109 830 aa7.37□□□□□ -1.23
UBR1-202ENST00000546274 MST1P26927 711 aa7.37□□□□□ -1.23
UBR1-202ENST00000546274 MVDP53602 400 aa7.37□□□□□ -1.23
UBR1-202ENST00000546274 BLOC1S1P78537 153 aa7.37□□□□□ -1.23
UBR1-202ENST00000546274 LMAN2Q12907 356 aa7.37□□□□□ -1.23
UBR1-202ENST00000546274 CHIT1Q13231 466 aa7.37□□□□□ -1.23
UBR1-202ENST00000546274 ALG11Q2TAA5 492 aa7.37□□□□□ -1.23
UBR1-202ENST00000546274 SPIN4Q56A73 249 aa7.37□□□□□ -1.23
UBR1-202ENST00000546274 Q6ZTK2 550 aa7.37□□□□□ -1.23
UBR1-202ENST00000546274 TPRG1Q6ZUI0 275 aa7.37□□□□□ -1.23
UBR1-202ENST00000546274 IKBIPQ70UQ0 350 aa7.37□□□□□ -1.23
UBR1-202ENST00000546274 DENND4AQ7Z401 1863 aa7.37□□□□□ -1.23
UBR1-202ENST00000546274 CFAP206Q8IYR0 622 aa7.37□□□□□ -1.23
UBR1-202ENST00000546274 EIF4E3Q8N5X7 224 aaKnown RBP7.37□□□□□ -1.23
UBR1-202ENST00000546274 OR5M9Q8NGP3 310 aa7.37□□□□□ -1.23
UBR1-202ENST00000546274 WFIKKN2Q8TEU8 576 aa7.37□□□□□ -1.23
UBR1-202ENST00000546274 LRR1Q96L50 414 aa7.37□□□□□ -1.23
UBR1-202ENST00000546274 TPT1P8Q9HAU6 139 aa7.37□□□□□ -1.23
UBR1-202ENST00000546274 IMP3Q9NV31 184 aaKnown RBP7.37□□□□□ -1.23
UBR1-202ENST00000546274 FAM120CQ9NX05 1096 aaKnown RBP7.37□□□□□ -1.23
UBR1-202ENST00000546274 AKAP7Q9P0M2 348 aaPredicted RBP7.37□□□□□ -1.23
UBR1-202ENST00000546274 CCDC88CQ9P219 2028 aa7.36□□□□□ -1.23
UBR1-202ENST00000546274 NUP210Q8TEM1 1887 aaPredicted RBP7.36□□□□□ -1.23
UBR1-202ENST00000546274 E7EQ34 232 aa7.36□□□□□ -1.23
UBR1-202ENST00000546274 TNFRSF11BO00300 401 aa7.36□□□□□ -1.23
UBR1-202ENST00000546274 NRG2O14511 850 aaPredicted RBP7.36□□□□□ -1.23
UBR1-202ENST00000546274 ZNF197O14709 1029 aa7.36□□□□□ -1.23
UBR1-202ENST00000546274 SUSD5O60279 629 aa7.36□□□□□ -1.23
UBR1-202ENST00000546274 RAD1O60671 282 aa7.36□□□□□ -1.23
UBR1-202ENST00000546274 CPSF4O95639 269 aaKnown RBP7.36□□□□□ -1.23
UBR1-202ENST00000546274 RB1P06400 928 aa7.36□□□□□ -1.23
UBR1-202ENST00000546274 MPC1LP0DKB6 136 aa7.36□□□□□ -1.23
UBR1-202ENST00000546274 C6P13671 934 aa7.36□□□□□ -1.23
UBR1-202ENST00000546274 PDHA2P29803 388 aa7.36□□□□□ -1.23
UBR1-202ENST00000546274 NPBWR1P48145 328 aa7.36□□□□□ -1.23
UBR1-202ENST00000546274 CASP9P55211 416 aa7.36□□□□□ -1.23
UBR1-202ENST00000546274 CDC42P60953 191 aa7.36□□□□□ -1.23
UBR1-202ENST00000546274 COTL1Q14019 142 aa7.36□□□□□ -1.23
UBR1-202ENST00000546274 RBM39Q14498 530 aaKnown RBP7.36□□□□□ -1.23
UBR1-202ENST00000546274 ATAT1Q5SQI0 421 aa7.36□□□□□ -1.23
UBR1-202ENST00000546274 NCMAPQ5T1S8 102 aa7.36□□□□□ -1.23
UBR1-202ENST00000546274 IDNKQ5T6J7 187 aa7.36□□□□□ -1.23
UBR1-202ENST00000546274 TXNDC8Q6A555 127 aa7.36□□□□□ -1.23
UBR1-202ENST00000546274 H3F3CQ6NXT2 135 aa7.36□□□□□ -1.23
UBR1-202ENST00000546274 ARL14EPQ8N8R7 260 aaPredicted RBP7.36□□□□□ -1.23
UBR1-202ENST00000546274 C11orf65Q8NCR3 313 aa7.36□□□□□ -1.23
UBR1-202ENST00000546274 OR10G2Q8NGC3 310 aa7.36□□□□□ -1.23
UBR1-202ENST00000546274 OR2AP1Q8NGE2 309 aa7.36□□□□□ -1.23
UBR1-202ENST00000546274 OR9Q2Q8NGE9 314 aa7.36□□□□□ -1.23
UBR1-202ENST00000546274 OR4C15Q8NGM1 316 aa7.36□□□□□ -1.23
UBR1-202ENST00000546274 RPLP0P6Q8NHW5 317 aa7.36□□□□□ -1.23
UBR1-202ENST00000546274 SPPL2AQ8TCT8 520 aa7.36□□□□□ -1.23
UBR1-202ENST00000546274 HMGB4Q8WW32 186 aa7.36□□□□□ -1.23
UBR1-202ENST00000546274 LMLNQ96KR4 655 aa7.36□□□□□ -1.23
UBR1-202ENST00000546274 MTERF1Q99551 399 aaKnown RBP7.36□□□□□ -1.23
UBR1-202ENST00000546274 PRO1933Q9H354 126 aa7.36□□□□□ -1.23
UBR1-202ENST00000546274 C11orf49Q9H6J7 331 aa7.36□□□□□ -1.23
UBR1-202ENST00000546274 TEX10Q9NXF1 929 aaPredicted RBP7.36□□□□□ -1.23
UBR1-202ENST00000546274 MRPL15Q9P015 296 aaKnown RBP7.36□□□□□ -1.23
UBR1-202ENST00000546274 FZD4Q9ULV1 537 aa7.36□□□□□ -1.23
UBR1-202ENST00000546274 CA14Q9ULX7 337 aa7.36□□□□□ -1.23
UBR1-202ENST00000546274 SNX11Q9Y5W9 270 aa7.36□□□□□ -1.23
UBR1-202ENST00000546274 NUBP2Q9Y5Y2 271 aa7.36□□□□□ -1.23
UBR1-202ENST00000546274 DOCK6Q96HP0 2047 aa7.36□□□□□ -1.23
UBR1-202ENST00000546274 UBE2CO00762 179 aa7.36□□□□□ -1.23
UBR1-202ENST00000546274 NARSO43776 548 aaKnown RBP7.36□□□□□ -1.23
UBR1-202ENST00000546274 MTX2O75431 263 aa7.36□□□□□ -1.23
UBR1-202ENST00000546274 CDC123O75794 336 aaPredicted RBP7.36□□□□□ -1.23
UBR1-202ENST00000546274 DRD2P14416 443 aa7.36□□□□□ -1.23
UBR1-202ENST00000546274 ZNF14P17017 642 aaPredicted RBP7.36□□□□□ -1.23
UBR1-202ENST00000546274 GJA1P17302 382 aa7.36□□□□□ -1.23
UBR1-202ENST00000546274 CD53P19397 219 aa7.36□□□□□ -1.23
UBR1-202ENST00000546274 EN2P19622 333 aaPredicted RBP7.36□□□□□ -1.23
UBR1-202ENST00000546274 SERPINA4P29622 427 aa7.36□□□□□ -1.23
UBR1-202ENST00000546274 HOXA6P31267 233 aa7.36□□□□□ -1.23
UBR1-202ENST00000546274 CNR2P34972 360 aa7.36□□□□□ -1.23
UBR1-202ENST00000546274 MAPK8P45983 427 aa7.36□□□□□ -1.23
UBR1-202ENST00000546274 INSL4Q14641 139 aa7.36□□□□□ -1.23
UBR1-202ENST00000546274 RGNQ15493 299 aa7.36□□□□□ -1.23
UBR1-202ENST00000546274 SLC5A12Q1EHB4 618 aa7.36□□□□□ -1.23
UBR1-202ENST00000546274 GFOD2Q3B7J2 385 aa7.36□□□□□ -1.23
UBR1-202ENST00000546274 LRRC73Q5JTD7 316 aa7.36□□□□□ -1.23
UBR1-202ENST00000546274 LHX8Q68G74 356 aa7.36□□□□□ -1.23
UBR1-202ENST00000546274 SFRP4Q6FHJ7 346 aaPredicted RBP7.36□□□□□ -1.23
UBR1-202ENST00000546274 LAPTM4BQ86VI4 370 aa7.36□□□□□ -1.23
UBR1-202ENST00000546274 PRSS58Q8IYP2 241 aa7.36□□□□□ -1.23
UBR1-202ENST00000546274 SLC43A2Q8N370 569 aa7.36□□□□□ -1.23
UBR1-202ENST00000546274 TCTEX1D2Q8WW35 142 aa7.36□□□□□ -1.23
UBR1-202ENST00000546274 CPNE4Q96A23 557 aaPredicted RBP7.36□□□□□ -1.23
UBR1-202ENST00000546274 ZFP3Q96NJ6 502 aa7.36□□□□□ -1.23
UBR1-202ENST00000546274 OR4K3Q96R72 315 aa7.36□□□□□ -1.23
UBR1-202ENST00000546274 NEU1Q99519 415 aa7.36□□□□□ -1.23
UBR1-202ENST00000546274 SMAD5Q99717 465 aaKnown RBP7.36□□□□□ -1.23
UBR1-202ENST00000546274 IL21Q9HBE4 155 aa7.36□□□□□ -1.23
UBR1-202ENST00000546274 VSX1Q9NZR4 365 aaPredicted RBP7.36□□□□□ -1.23
UBR1-202ENST00000546274 VPS29Q9UBQ0 182 aa7.36□□□□□ -1.23
UBR1-202ENST00000546274 CD84Q9UIB8 345 aa7.36□□□□□ -1.23
UBR1-202ENST00000546274 PLEKHA6Q9Y2H5 1048 aa7.36□□□□□ -1.23
UBR1-202ENST00000546274 A0A1B0GW55 424 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms