RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 CAMK2AQ9UQM7 478 aa13.23□□□□□ -0.29
SRP54-202ENST00000546080 NPFFR2Q9Y5X5 522 aa13.23□□□□□ -0.29
SRP54-202ENST00000546080 A0A0B4J203 849 aa13.22□□□□□ -0.29
SRP54-202ENST00000546080 MFSD2BA6NFX1 497 aa13.22□□□□□ -0.29
SRP54-202ENST00000546080 H7BY64 318 aa13.22□□□□□ -0.29
SRP54-202ENST00000546080 CDC42EP2O14613 210 aa13.22□□□□□ -0.29
SRP54-202ENST00000546080 TOR1AO14656 332 aa13.22□□□□□ -0.29
SRP54-202ENST00000546080 GSTZ1O43708 216 aaPredicted RBP13.22□□□□□ -0.29
SRP54-202ENST00000546080 OR1F1O43749 312 aa13.22□□□□□ -0.29
SRP54-202ENST00000546080 REM1O75628 298 aa13.22□□□□□ -0.29
SRP54-202ENST00000546080 TFP02787 698 aa13.22□□□□□ -0.29
SRP54-202ENST00000546080 SAGP10523 405 aaPredicted RBP13.22□□□□□ -0.29
SRP54-202ENST00000546080 ACVR1BP36896 505 aa13.22□□□□□ -0.29
SRP54-202ENST00000546080 GDNFP39905 211 aa13.22□□□□□ -0.29
SRP54-202ENST00000546080 ZNF157P51786 506 aaPredicted RBP13.22□□□□□ -0.29
SRP54-202ENST00000546080 STXBP1P61764 594 aaKnown RBP13.22□□□□□ -0.29
SRP54-202ENST00000546080 TRA2BP62995 288 aaKnown RBP13.22□□□□□ -0.29
SRP54-202ENST00000546080 PRKCZQ05513 592 aa13.22□□□□□ -0.29
SRP54-202ENST00000546080 TGM3Q08188 693 aa13.22□□□□□ -0.29
SRP54-202ENST00000546080 FAM46CQ5VWP2 391 aa13.22□□□□□ -0.29
SRP54-202ENST00000546080 MTFR2Q6P444 385 aa13.22□□□□□ -0.29
SRP54-202ENST00000546080 FAM198BQ6UWH4 519 aa13.22□□□□□ -0.29
SRP54-202ENST00000546080 UBE3DQ7Z6J8 389 aa13.22□□□□□ -0.29
SRP54-202ENST00000546080 TCEAL8Q8IYN2 117 aa13.22□□□□□ -0.29
SRP54-202ENST00000546080 CRIPAKQ8N1N5 446 aa13.22□□□□□ -0.29
SRP54-202ENST00000546080 SLC44A3Q8N4M1 653 aa13.22□□□□□ -0.29
SRP54-202ENST00000546080 C17orf47Q8NEP4 570 aa13.22□□□□□ -0.29
SRP54-202ENST00000546080 OR56A1Q8NGH5 318 aa13.22□□□□□ -0.29
SRP54-202ENST00000546080 ZG16BQ96DA0 208 aa13.22□□□□□ -0.29
SRP54-202ENST00000546080 DTD2Q96FN9 168 aa13.22□□□□□ -0.29
SRP54-202ENST00000546080 C4orf36Q96KX1 117 aa13.22□□□□□ -0.29
SRP54-202ENST00000546080 PRAP1Q96NZ9 151 aa13.22□□□□□ -0.29
SRP54-202ENST00000546080 OR7D2Q96RA2 312 aa13.22□□□□□ -0.29
SRP54-202ENST00000546080 NRTNQ99748 197 aa13.22□□□□□ -0.29
SRP54-202ENST00000546080 FN3KQ9H479 309 aa13.22□□□□□ -0.29
SRP54-202ENST00000546080 MTG2Q9H4K7 406 aa13.22□□□□□ -0.29
SRP54-202ENST00000546080 AUNIPQ9H7T9 357 aa13.22□□□□□ -0.29
SRP54-202ENST00000546080 EQTNQ9NQ60 294 aa13.22□□□□□ -0.29
SRP54-202ENST00000546080 WASH6PQ9NQA3 447 aa13.22□□□□□ -0.29
SRP54-202ENST00000546080 INPP5EQ9NRR6 644 aa13.22□□□□□ -0.29
SRP54-202ENST00000546080 FLVCR2Q9UPI3 526 aa13.22□□□□□ -0.29
SRP54-202ENST00000546080 COL4A3Q01955 1670 aa13.22□□□□□ -0.29
SRP54-202ENST00000546080 A0A0A6YYD5 115 aa13.22□□□□□ -0.29
SRP54-202ENST00000546080 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.22□□□□□ -0.29
SRP54-202ENST00000546080 J3QLW9 94 aa13.22□□□□□ -0.29
SRP54-202ENST00000546080 L7N2F9 121 aa13.22□□□□□ -0.29
SRP54-202ENST00000546080 TGM6O95932 706 aa13.22□□□□□ -0.29
SRP54-202ENST00000546080 MRPL3P09001 348 aaKnown RBP13.22□□□□□ -0.29
SRP54-202ENST00000546080 ZNF19P17023 458 aa13.22□□□□□ -0.29
SRP54-202ENST00000546080 ATF1P18846 271 aa13.22□□□□□ -0.29
SRP54-202ENST00000546080 PSMB5P28074 263 aa13.22□□□□□ -0.29
SRP54-202ENST00000546080 SLC16A1P53985 500 aa13.22□□□□□ -0.29
SRP54-202ENST00000546080 C6orf132Q5T0Z8 1188 aa13.22□□□□□ -0.29
SRP54-202ENST00000546080 PRPF38BQ5VTL8 546 aaKnown RBP13.22□□□□□ -0.29
SRP54-202ENST00000546080 METTL11BQ5VVY1 283 aa13.22□□□□□ -0.29
SRP54-202ENST00000546080 SFRP4Q6FHJ7 346 aaPredicted RBP13.22□□□□□ -0.29
SRP54-202ENST00000546080 Q6ZTK2 550 aa13.22□□□□□ -0.29
SRP54-202ENST00000546080 ADIPOR2Q86V24 386 aa13.22□□□□□ -0.29
SRP54-202ENST00000546080 ZNF547Q8IVP9 402 aa13.22□□□□□ -0.29
SRP54-202ENST00000546080 DCUN1D3Q8IWE4 304 aa13.22□□□□□ -0.29
SRP54-202ENST00000546080 OR4D9Q8NGE8 314 aa13.22□□□□□ -0.29
SRP54-202ENST00000546080 OR52L1Q8NGH7 329 aa13.22□□□□□ -0.29
SRP54-202ENST00000546080 OR6M1Q8NGM8 313 aa13.22□□□□□ -0.29
SRP54-202ENST00000546080 MOSPD2Q8NHP6 518 aa13.22□□□□□ -0.29
SRP54-202ENST00000546080 ELMOD3Q96FG2 381 aa13.22□□□□□ -0.29
SRP54-202ENST00000546080 OR52D1Q9H346 318 aa13.22□□□□□ -0.29
SRP54-202ENST00000546080 HMX1Q9NP08 348 aaPredicted RBP13.22□□□□□ -0.29
SRP54-202ENST00000546080 SAGE1Q9NXZ1 904 aa13.22□□□□□ -0.29
SRP54-202ENST00000546080 C17orf113A0A1B0GUU1 675 aa13.21□□□□□ -0.29
SRP54-202ENST00000546080 K7ESM1 405 aa13.21□□□□□ -0.29
SRP54-202ENST00000546080 HYAL3O43820 417 aaPredicted RBP13.21□□□□□ -0.29
SRP54-202ENST00000546080 STX11O75558 287 aa13.21□□□□□ -0.29
SRP54-202ENST00000546080 SC5DO75845 299 aa13.21□□□□□ -0.29
SRP54-202ENST00000546080 THY1P04216 161 aa13.21□□□□□ -0.29
SRP54-202ENST00000546080 ELNP15502 786 aa13.21□□□□□ -0.29
SRP54-202ENST00000546080 GPR1P46091 355 aa13.21□□□□□ -0.29
SRP54-202ENST00000546080 VEGFCP49767 419 aa13.21□□□□□ -0.29
SRP54-202ENST00000546080 MAPK14Q16539 360 aa13.21□□□□□ -0.29
SRP54-202ENST00000546080 TUSC1Q2TAM9 212 aa13.21□□□□□ -0.29
SRP54-202ENST00000546080 SPOUT1Q5T280 376 aaKnown RBP13.21□□□□□ -0.29
SRP54-202ENST00000546080 FAM69AQ5T7M9 428 aa13.21□□□□□ -0.29
SRP54-202ENST00000546080 SEZ6L2Q6UXD5 910 aa13.21□□□□□ -0.29
SRP54-202ENST00000546080 RPTNQ6XPR3 784 aa13.21□□□□□ -0.29
SRP54-202ENST00000546080 IZUMO1Q8IYV9 350 aa13.21□□□□□ -0.29
SRP54-202ENST00000546080 CCDC116Q8IYX3 515 aa13.21□□□□□ -0.29
SRP54-202ENST00000546080 OR13C5Q8NGS8 318 aa13.21□□□□□ -0.29
SRP54-202ENST00000546080 OR2L2Q8NH16 312 aa13.21□□□□□ -0.29
SRP54-202ENST00000546080 FANK1Q8TC84 345 aa13.21□□□□□ -0.29
SRP54-202ENST00000546080 SMIM4Q8WVI0 70 aa13.21□□□□□ -0.29
SRP54-202ENST00000546080 AUTS2Q8WXX7 1259 aa13.21□□□□□ -0.29
SRP54-202ENST00000546080 THAP4Q8WY91 577 aa13.21□□□□□ -0.29
SRP54-202ENST00000546080 PIGKQ92643 395 aa13.21□□□□□ -0.29
SRP54-202ENST00000546080 C1QTNF2Q9BXJ5 285 aa13.21□□□□□ -0.29
SRP54-202ENST00000546080 CD93Q9NPY3 652 aa13.21□□□□□ -0.29
SRP54-202ENST00000546080 CALML5Q9NZT1 146 aa13.21□□□□□ -0.29
SRP54-202ENST00000546080 MRPL15Q9P015 296 aaKnown RBP13.21□□□□□ -0.29
SRP54-202ENST00000546080 MGAT4CQ9UBM8 478 aa13.21□□□□□ -0.29
SRP54-202ENST00000546080 SLC7A7Q9UM01 511 aa13.21□□□□□ -0.29
SRP54-202ENST00000546080 KIAA1549LQ6ZVL6 1849 aa13.21□□□□□ -0.29
SRP54-202ENST00000546080 A0A1W2PRU2 124 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms