RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 PAHP00439 452 aa8.07□□□□□ -1.12
CLIP1-218ENST00000545889 BCKDHAP12694 445 aa8.07□□□□□ -1.12
CLIP1-218ENST00000545889 CD1DP15813 335 aa8.07□□□□□ -1.12
CLIP1-218ENST00000545889 RPS3P23396 243 aaKnown RBP eCLIP8.07□□□□□ -1.12
CLIP1-218ENST00000545889 C14orf28Q4W4Y0 310 aa8.07□□□□□ -1.12
CLIP1-218ENST00000545889 Q6ZS52 159 aa8.07□□□□□ -1.12
CLIP1-218ENST00000545889 ZSWIM9Q86XI8 627 aa8.07□□□□□ -1.12
CLIP1-218ENST00000545889 LMNTD1Q8N9Z9 388 aa8.07□□□□□ -1.12
CLIP1-218ENST00000545889 OR9A4Q8NGU2 314 aa8.07□□□□□ -1.12
CLIP1-218ENST00000545889 IFI44Q8TCB0 444 aa8.07□□□□□ -1.12
CLIP1-218ENST00000545889 SLC2A12Q8TD20 617 aa8.07□□□□□ -1.12
CLIP1-218ENST00000545889 OSTF1Q92882 214 aa8.07□□□□□ -1.12
CLIP1-218ENST00000545889 ZNF285Q96NJ3 590 aa8.07□□□□□ -1.12
CLIP1-218ENST00000545889 MFRPQ9BY79 579 aa8.07□□□□□ -1.12
CLIP1-218ENST00000545889 OR10A4Q9H209 315 aa8.07□□□□□ -1.12
CLIP1-218ENST00000545889 OR51B6Q9H340 312 aa8.07□□□□□ -1.12
CLIP1-218ENST00000545889 C6orf106Q9H6K1 298 aaPredicted RBP8.07□□□□□ -1.12
CLIP1-218ENST00000545889 PELI2Q9HAT8 420 aa8.07□□□□□ -1.12
CLIP1-218ENST00000545889 VNN3Q9NY84 501 aa8.07□□□□□ -1.12
CLIP1-218ENST00000545889 TAS2R7Q9NYW3 318 aa8.07□□□□□ -1.12
CLIP1-218ENST00000545889 GIMAP2Q9UG22 337 aa8.07□□□□□ -1.12
CLIP1-218ENST00000545889 KCNS2Q9ULS6 477 aa8.07□□□□□ -1.12
CLIP1-218ENST00000545889 ABCG2Q9UNQ0 655 aa8.07□□□□□ -1.12
CLIP1-218ENST00000545889 ACACAQ13085 2346 aa8.07□□□□□ -1.12
CLIP1-218ENST00000545889 TEX13DA0A0J9YY54 714 aaPredicted RBP8.07□□□□□ -1.12
CLIP1-218ENST00000545889 YY2O15391 372 aa8.07□□□□□ -1.12
CLIP1-218ENST00000545889 FLRT2O43155 660 aa8.07□□□□□ -1.12
CLIP1-218ENST00000545889 UPK1BO75841 260 aa8.07□□□□□ -1.12
CLIP1-218ENST00000545889 PDYNP01213 254 aa8.07□□□□□ -1.12
CLIP1-218ENST00000545889 IFNA21P01568 189 aa8.07□□□□□ -1.12
CLIP1-218ENST00000545889 OPN1LWP04000 364 aa8.07□□□□□ -1.12
CLIP1-218ENST00000545889 C8BP07358 591 aa8.07□□□□□ -1.12
CLIP1-218ENST00000545889 CERS1P27544 350 aa8.07□□□□□ -1.12
CLIP1-218ENST00000545889 SLC3A1Q07837 685 aa8.07□□□□□ -1.12
CLIP1-218ENST00000545889 EIF4EBP2Q13542 120 aaPredicted RBP8.07□□□□□ -1.12
CLIP1-218ENST00000545889 OR4D1Q15615 310 aa8.07□□□□□ -1.12
CLIP1-218ENST00000545889 MEP1AQ16819 746 aa8.07□□□□□ -1.12
CLIP1-218ENST00000545889 IER5LQ5T953 404 aa8.07□□□□□ -1.12
CLIP1-218ENST00000545889 OR2T5Q6IEZ7 315 aa8.07□□□□□ -1.12
CLIP1-218ENST00000545889 OR2T29Q8NH02 315 aa8.07□□□□□ -1.12
CLIP1-218ENST00000545889 TFAP2CQ92754 450 aa8.07□□□□□ -1.12
CLIP1-218ENST00000545889 ACTR6Q9GZN1 396 aa8.07□□□□□ -1.12
CLIP1-218ENST00000545889 DNTTIP1Q9H147 329 aa8.07□□□□□ -1.12
CLIP1-218ENST00000545889 TRIM36Q9NQ86 728 aa8.07□□□□□ -1.12
CLIP1-218ENST00000545889 PARPBPQ9NWS1 579 aa8.07□□□□□ -1.12
CLIP1-218ENST00000545889 ERVK13-1Q9NX77 482 aa8.07□□□□□ -1.12
CLIP1-218ENST00000545889 ZDHHC2Q9UIJ5 367 aa8.07□□□□□ -1.12
CLIP1-218ENST00000545889 HS3ST3A1Q9Y663 406 aa8.07□□□□□ -1.12
CLIP1-218ENST00000545889 MBTPS2O43462 519 aa8.07□□□□□ -1.12
CLIP1-218ENST00000545889 PROM1O43490 865 aa8.07□□□□□ -1.12
CLIP1-218ENST00000545889 SOX14O95416 240 aa8.07□□□□□ -1.12
CLIP1-218ENST00000545889 CTSLP07711 333 aa8.07□□□□□ -1.12
CLIP1-218ENST00000545889 FDXRP22570 491 aa8.07□□□□□ -1.12
CLIP1-218ENST00000545889 PPP1R8Q12972 351 aaKnown RBP8.07□□□□□ -1.12
CLIP1-218ENST00000545889 FADDQ13158 208 aa8.07□□□□□ -1.12
CLIP1-218ENST00000545889 ARHGAP19Q14CB8 494 aa8.07□□□□□ -1.12
CLIP1-218ENST00000545889 RPE65Q16518 533 aa8.07□□□□□ -1.12
CLIP1-218ENST00000545889 C6orf136Q5SQH8 315 aa8.07□□□□□ -1.12
CLIP1-218ENST00000545889 PRAMEF20Q5VT98 475 aa8.07□□□□□ -1.12
CLIP1-218ENST00000545889 STEAP3Q658P3 488 aa8.07□□□□□ -1.12
CLIP1-218ENST00000545889 ZNF585AQ6P3V2 769 aa8.07□□□□□ -1.12
CLIP1-218ENST00000545889 LINGO2Q7L985 606 aa8.07□□□□□ -1.12
CLIP1-218ENST00000545889 ZNF551Q7Z340 670 aaPredicted RBP8.07□□□□□ -1.12
CLIP1-218ENST00000545889 FBXL6Q8N531 539 aa8.07□□□□□ -1.12
CLIP1-218ENST00000545889 AQP11Q8NBQ7 271 aa8.07□□□□□ -1.12
CLIP1-218ENST00000545889 DEFB124Q8NES8 71 aa8.07□□□□□ -1.12
CLIP1-218ENST00000545889 OR2L2Q8NH16 312 aa8.07□□□□□ -1.12
CLIP1-218ENST00000545889 ZUFSPQ96AP4 578 aa8.07□□□□□ -1.12
CLIP1-218ENST00000545889 ECHDC3Q96DC8 303 aa8.07□□□□□ -1.12
CLIP1-218ENST00000545889 HDHD5Q9BXW7 423 aa8.07□□□□□ -1.12
CLIP1-218ENST00000545889 CUEDC1Q9NWM3 386 aaPredicted RBP8.07□□□□□ -1.12
CLIP1-218ENST00000545889 CYB5R1Q9UHQ9 305 aa8.07□□□□□ -1.12
CLIP1-218ENST00000545889 TLCD2A6NGC4 264 aa8.07□□□□□ -1.12
CLIP1-218ENST00000545889 GALR3O60755 368 aaPredicted RBP8.07□□□□□ -1.12
CLIP1-218ENST00000545889 CD160O95971 181 aa8.07□□□□□ -1.12
CLIP1-218ENST00000545889 LPLP06858 475 aa8.07□□□□□ -1.12
CLIP1-218ENST00000545889 CNR2P34972 360 aa8.07□□□□□ -1.12
CLIP1-218ENST00000545889 SOX2P48431 317 aa8.07□□□□□ -1.12
CLIP1-218ENST00000545889 CYB561P49447 251 aa8.07□□□□□ -1.12
CLIP1-218ENST00000545889 HLCSP50747 726 aa8.07□□□□□ -1.12
CLIP1-218ENST00000545889 PTGR1Q14914 329 aa8.07□□□□□ -1.12
CLIP1-218ENST00000545889 ZNF404Q494X3 552 aa8.07□□□□□ -1.12
CLIP1-218ENST00000545889 OR5M10Q6IEU7 315 aa8.07□□□□□ -1.12
CLIP1-218ENST00000545889 SLC12A9Q9BXP2 914 aa8.07□□□□□ -1.12
CLIP1-218ENST00000545889 CD320Q9NPF0 282 aa8.07□□□□□ -1.12
CLIP1-218ENST00000545889 C1GALT1Q9NS00 363 aa8.07□□□□□ -1.12
CLIP1-218ENST00000545889 RHCGQ9UBD6 479 aa8.07□□□□□ -1.12
CLIP1-218ENST00000545889 TBC1D24Q9ULP9 559 aa8.07□□□□□ -1.12
CLIP1-218ENST00000545889 TMEM184BQ9Y519 407 aaPredicted RBP8.07□□□□□ -1.12
CLIP1-218ENST00000545889 AKAP6Q13023 2319 aa8.06□□□□□ -1.12
CLIP1-218ENST00000545889 GXYLT2A0PJZ3 443 aa8.06□□□□□ -1.12
CLIP1-218ENST00000545889 G3V3Y1 287 aa8.06□□□□□ -1.12
CLIP1-218ENST00000545889 AIREO43918 545 aa8.06□□□□□ -1.12
CLIP1-218ENST00000545889 NOBOXO60393 691 aa8.06□□□□□ -1.12
CLIP1-218ENST00000545889 BPNT1O95861 308 aa8.06□□□□□ -1.12
CLIP1-218ENST00000545889 ETV4P43268 484 aa8.06□□□□□ -1.12
CLIP1-218ENST00000545889 COL19A1Q14993 1142 aa8.06□□□□□ -1.12
CLIP1-218ENST00000545889 CYBRD1Q53TN4 286 aa8.06□□□□□ -1.12
CLIP1-218ENST00000545889 TECRLQ5HYJ1 363 aa8.06□□□□□ -1.12
CLIP1-218ENST00000545889 TMEM196Q5HYL7 178 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms