RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 MS4A4EQ96PG1 132 aa8.14□□□□□ -1.11
TDP1-204ENST00000545686 SARGQ9BW04 601 aa8.14□□□□□ -1.11
TDP1-204ENST00000545686 TMEM168Q9H0V1 697 aa8.14□□□□□ -1.11
TDP1-204ENST00000545686 LRRN3Q9H3W5 708 aa8.14□□□□□ -1.11
TDP1-204ENST00000545686 KLHL31Q9H511 634 aa8.14□□□□□ -1.11
TDP1-204ENST00000545686 MTHFD2LQ9H903 347 aaPredicted RBP8.14□□□□□ -1.11
TDP1-204ENST00000545686 CMC2Q9NRP2 79 aa8.14□□□□□ -1.11
TDP1-204ENST00000545686 LYARQ9NX58 379 aaKnown RBP8.14□□□□□ -1.11
TDP1-204ENST00000545686 UBQLN2Q9UHD9 624 aa8.14□□□□□ -1.11
TDP1-204ENST00000545686 ZNF223Q9UK11 482 aaPredicted RBP8.14□□□□□ -1.11
TDP1-204ENST00000545686 PRKAB1Q9Y478 270 aa8.14□□□□□ -1.11
TDP1-204ENST00000545686 ABHD14A-ACY1A0A1B0GW23 586 aa8.14□□□□□ -1.11
TDP1-204ENST00000545686 FAM183AA6NL82 134 aa8.14□□□□□ -1.11
TDP1-204ENST00000545686 GPR171O14626 319 aa8.14□□□□□ -1.11
TDP1-204ENST00000545686 STX11O75558 287 aa8.14□□□□□ -1.11
TDP1-204ENST00000545686 SNAPC5O75971 98 aa8.14□□□□□ -1.11
TDP1-204ENST00000545686 RCBTB2O95199 551 aa8.14□□□□□ -1.11
TDP1-204ENST00000545686 ZIC2O95409 532 aaPredicted RBP8.14□□□□□ -1.11
TDP1-204ENST00000545686 NTN1O95631 604 aa8.14□□□□□ -1.11
TDP1-204ENST00000545686 GNRH1P01148 92 aa8.14□□□□□ -1.11
TDP1-204ENST00000545686 H2AFB2P0C5Z0 115 aa8.14□□□□□ -1.11
TDP1-204ENST00000545686 BMP7P18075 431 aa8.14□□□□□ -1.11
TDP1-204ENST00000545686 RAB3BP20337 219 aa8.14□□□□□ -1.11
TDP1-204ENST00000545686 BCL6P41182 706 aa8.14□□□□□ -1.11
TDP1-204ENST00000545686 PDX1P52945 283 aa8.14□□□□□ -1.11
TDP1-204ENST00000545686 NRG3P56975 720 aa8.14□□□□□ -1.11
TDP1-204ENST00000545686 OR10A3P58181 314 aa8.14□□□□□ -1.11
TDP1-204ENST00000545686 CAMK2DQ13557 499 aa8.14□□□□□ -1.11
TDP1-204ENST00000545686 DHCR24Q15392 516 aa8.14□□□□□ -1.11
TDP1-204ENST00000545686 PUS10Q3MIT2 529 aaKnown RBP8.14□□□□□ -1.11
TDP1-204ENST00000545686 DMKNQ6E0U4 476 aaPredicted RBP8.14□□□□□ -1.11
TDP1-204ENST00000545686 RTL10Q7L3V2 364 aa8.14□□□□□ -1.11
TDP1-204ENST00000545686 ANKRD33Q7Z3H0 272 aa8.14□□□□□ -1.11
TDP1-204ENST00000545686 CEACAM19Q7Z692 300 aa8.14□□□□□ -1.11
TDP1-204ENST00000545686 TMCO2Q7Z6W1 182 aaPredicted RBP8.14□□□□□ -1.11
TDP1-204ENST00000545686 REM2Q8IYK8 340 aaPredicted RBP8.14□□□□□ -1.11
TDP1-204ENST00000545686 HDDC3Q8N4P3 179 aa8.14□□□□□ -1.11
TDP1-204ENST00000545686 OR10H4Q8NGA5 316 aa8.14□□□□□ -1.11
TDP1-204ENST00000545686 OR11H4Q8NGC9 324 aa8.14□□□□□ -1.11
TDP1-204ENST00000545686 OR2A1Q8NGT9 310 aa8.14□□□□□ -1.11
TDP1-204ENST00000545686 OR2L8Q8NGY9 312 aa8.14□□□□□ -1.11
TDP1-204ENST00000545686 CD99L2Q8TCZ2 262 aa8.14□□□□□ -1.11
TDP1-204ENST00000545686 ADAMTS15Q8TE58 950 aa8.14□□□□□ -1.11
TDP1-204ENST00000545686 RAB7BQ96AH8 199 aa8.14□□□□□ -1.11
TDP1-204ENST00000545686 ZG16BQ96DA0 208 aa8.14□□□□□ -1.11
TDP1-204ENST00000545686 NXPE2Q96DL1 559 aa8.14□□□□□ -1.11
TDP1-204ENST00000545686 PGLYRP3Q96LB9 341 aa8.14□□□□□ -1.11
TDP1-204ENST00000545686 HS6ST2Q96MM7 605 aa8.14□□□□□ -1.11
TDP1-204ENST00000545686 ZNF681Q96N22 645 aa8.14□□□□□ -1.11
TDP1-204ENST00000545686 CD180Q99467 661 aa8.14□□□□□ -1.11
TDP1-204ENST00000545686 NRTNQ99748 197 aa8.14□□□□□ -1.11
TDP1-204ENST00000545686 CACNG6Q9BXT2 260 aa8.14□□□□□ -1.11
TDP1-204ENST00000545686 ZCCHC4Q9H5U6 513 aa8.14□□□□□ -1.11
TDP1-204ENST00000545686 EQTNQ9NQ60 294 aa8.14□□□□□ -1.11
TDP1-204ENST00000545686 HAO2Q9NYQ3 351 aa8.14□□□□□ -1.11
TDP1-204ENST00000545686 SLC7A7Q9UM01 511 aa8.14□□□□□ -1.11
TDP1-204ENST00000545686 CAMK2AQ9UQM7 478 aa8.14□□□□□ -1.11
TDP1-204ENST00000545686 TMEM5Q9Y2B1 443 aa8.14□□□□□ -1.11
TDP1-204ENST00000545686 ZNF780BQ9Y6R6 833 aa8.14□□□□□ -1.11
TDP1-204ENST00000545686 TICRRQ7Z2Z1 1910 aa8.14□□□□□ -1.11
TDP1-204ENST00000545686 TBC1D3KA0A087X1G2 549 aa8.13□□□□□ -1.11
TDP1-204ENST00000545686 A0A1B0GTQ1 180 aa8.13□□□□□ -1.11
TDP1-204ENST00000545686 TRAPPC13A5PLN9 417 aa8.13□□□□□ -1.11
TDP1-204ENST00000545686 TBC1D3BA6NDS4 549 aa8.13□□□□□ -1.11
TDP1-204ENST00000545686 TBC1D3FA6NER0 549 aaPredicted RBP8.13□□□□□ -1.11
TDP1-204ENST00000545686 C4orf51C9J302 202 aa8.13□□□□□ -1.11
TDP1-204ENST00000545686 PRAF2O60831 178 aa8.13□□□□□ -1.11
TDP1-204ENST00000545686 FGF18O76093 207 aa8.13□□□□□ -1.11
TDP1-204ENST00000545686 ADH5P11766 374 aa8.13□□□□□ -1.11
TDP1-204ENST00000545686 TYRP1P17643 537 aa8.13□□□□□ -1.11
TDP1-204ENST00000545686 CXCL3P19876 107 aa8.13□□□□□ -1.11
TDP1-204ENST00000545686 C4BPBP20851 252 aa8.13□□□□□ -1.11
TDP1-204ENST00000545686 DNASE1P24855 282 aa8.13□□□□□ -1.11
TDP1-204ENST00000545686 GIFP27352 417 aa8.13□□□□□ -1.11
TDP1-204ENST00000545686 WEE1P30291 646 aa8.13□□□□□ -1.11
TDP1-204ENST00000545686 CDK3Q00526 305 aa8.13□□□□□ -1.11
TDP1-204ENST00000545686 POU4F2Q12837 409 aa8.13□□□□□ -1.11
TDP1-204ENST00000545686 GRK1Q15835 563 aa8.13□□□□□ -1.11
TDP1-204ENST00000545686 MAPK14Q16539 360 aa8.13□□□□□ -1.11
TDP1-204ENST00000545686 FAM69AQ5T7M9 428 aa8.13□□□□□ -1.11
TDP1-204ENST00000545686 TBC1D3GQ6DHY5 549 aa8.13□□□□□ -1.11
TDP1-204ENST00000545686 MFSD12Q6NUT3 480 aa8.13□□□□□ -1.11
TDP1-204ENST00000545686 ASPGQ86U10 573 aa8.13□□□□□ -1.11
TDP1-204ENST00000545686 SIAH3Q8IW03 269 aa8.13□□□□□ -1.11
TDP1-204ENST00000545686 FBXL6Q8N531 539 aa8.13□□□□□ -1.11
TDP1-204ENST00000545686 OR9A2Q8NGT5 310 aa8.13□□□□□ -1.11
TDP1-204ENST00000545686 RPLP0P6Q8NHW5 317 aa8.13□□□□□ -1.11
TDP1-204ENST00000545686 GIMAP1Q8WWP7 306 aa8.13□□□□□ -1.11
TDP1-204ENST00000545686 HHIPL1Q96JK4 782 aa8.13□□□□□ -1.11
TDP1-204ENST00000545686 PRSS27Q9BQR3 290 aa8.13□□□□□ -1.11
TDP1-204ENST00000545686 DLL4Q9NR61 685 aa8.13□□□□□ -1.11
TDP1-204ENST00000545686 SIDT1Q9NXL6 827 aaKnown RBP8.13□□□□□ -1.11
TDP1-204ENST00000545686 ZMIZ1Q9ULJ6 1067 aa8.13□□□□□ -1.11
TDP1-204ENST00000545686 NTNG1Q9Y2I2 539 aa8.13□□□□□ -1.11
TDP1-204ENST00000545686 FKBP7Q9Y680 259 aa8.13□□□□□ -1.11
TDP1-204ENST00000545686 GOLGA4Q13439 2230 aaKnown RBP8.13□□□□□ -1.11
TDP1-204ENST00000545686 PRR23D1E9PI22 279 aaPredicted RBP8.13□□□□□ -1.11
TDP1-204ENST00000545686 MEN1O00255 615 aa8.13□□□□□ -1.11
TDP1-204ENST00000545686 ZNF749O43361 778 aa8.13□□□□□ -1.11
TDP1-204ENST00000545686 FMO6PO60774 539 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms