RNA–Protein interactions for RNA: ENST00000545540.5

USP28-214, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2 BASIC

Gene USP28, Length 3,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-214ENST00000545540 YES1P07947 543 aa13.99□□□□□ -0.17
USP28-214ENST00000545540 GRPRP30550 384 aa13.99□□□□□ -0.17
USP28-214ENST00000545540 MRPL2Q5T653 305 aaKnown RBP13.99□□□□□ -0.17
USP28-214ENST00000545540 FAM205BPQ63HN1 556 aa13.99□□□□□ -0.17
USP28-214ENST00000545540 MRM1Q6IN84 353 aaKnown RBP13.99□□□□□ -0.17
USP28-214ENST00000545540 CD300LDQ6UXZ3 194 aa13.99□□□□□ -0.17
USP28-214ENST00000545540 PRSS45Q7RTY3 260 aa13.99□□□□□ -0.17
USP28-214ENST00000545540 SLC37A3Q8NCC5 494 aa13.99□□□□□ -0.17
USP28-214ENST00000545540 PTP4A1Q93096 173 aa13.99□□□□□ -0.17
USP28-214ENST00000545540 TEX101Q9BY14 249 aa13.99□□□□□ -0.17
USP28-214ENST00000545540 ACTRT3Q9BYD9 372 aa13.99□□□□□ -0.17
USP28-214ENST00000545540 IL23AQ9NPF7 189 aa13.99□□□□□ -0.17
USP28-214ENST00000545540 NKIRAS2Q9NYR9 191 aa13.99□□□□□ -0.17
USP28-214ENST00000545540 IL20Q9NYY1 176 aa13.99□□□□□ -0.17
USP28-214ENST00000545540 ACSL5Q9ULC5 683 aa13.99□□□□□ -0.17
USP28-214ENST00000545540 TDRD6O60522 2096 aaKnown RBP13.98□□□□□ -0.17
USP28-214ENST00000545540 A0A087WV48 116 aa13.98□□□□□ -0.17
USP28-214ENST00000545540 GXYLT2A0PJZ3 443 aa13.98□□□□□ -0.17
USP28-214ENST00000545540 STK25O00506 426 aa13.98□□□□□ -0.17
USP28-214ENST00000545540 GMFGO60234 142 aa13.98□□□□□ -0.17
USP28-214ENST00000545540 CPMP14384 443 aa13.98□□□□□ -0.17
USP28-214ENST00000545540 NT5EP21589 574 aa13.98□□□□□ -0.17
USP28-214ENST00000545540 PYCR1P32322 319 aa13.98□□□□□ -0.17
USP28-214ENST00000545540 IGFALSP35858 605 aa13.98□□□□□ -0.17
USP28-214ENST00000545540 IFNGR2P38484 337 aa13.98□□□□□ -0.17
USP28-214ENST00000545540 NAA10P41227 235 aaPredicted RBP13.98□□□□□ -0.17
USP28-214ENST00000545540 MFSD12Q6NUT3 480 aa13.98□□□□□ -0.17
USP28-214ENST00000545540 CEACAM19Q7Z692 300 aa13.98□□□□□ -0.17
USP28-214ENST00000545540 GPR135Q8IZ08 494 aa13.98□□□□□ -0.17
USP28-214ENST00000545540 OSTF1Q92882 214 aa13.98□□□□□ -0.17
USP28-214ENST00000545540 RBFOX1Q9NWB1 397 aaKnown RBP13.98□□□□□ -0.17
USP28-214ENST00000545540 UCKL1Q9NWZ5 548 aa13.98□□□□□ -0.17
USP28-214ENST00000545540 ZNF346Q9UL40 294 aaKnown RBP13.98□□□□□ -0.17
USP28-214ENST00000545540 TRDV1A0A1B0GX56 115 aa13.98□□□□□ -0.17
USP28-214ENST00000545540 ANKRD61A6NGH8 418 aa13.98□□□□□ -0.17
USP28-214ENST00000545540 PRKAR1AP10644 381 aa13.98□□□□□ -0.17
USP28-214ENST00000545540 PPP3R1P63098 170 aa13.98□□□□□ -0.17
USP28-214ENST00000545540 NDUFAF6Q330K2 333 aa13.98□□□□□ -0.17
USP28-214ENST00000545540 FANK1Q8TC84 345 aa13.98□□□□□ -0.17
USP28-214ENST00000545540 TIMP4Q99727 224 aa13.98□□□□□ -0.17
USP28-214ENST00000545540 SLC17A9Q9BYT1 436 aa13.98□□□□□ -0.17
USP28-214ENST00000545540 C11orf49Q9H6J7 331 aa13.98□□□□□ -0.17
USP28-214ENST00000545540 ENAMQ9NRM1 1142 aa13.98□□□□□ -0.17
USP28-214ENST00000545540 NLGN3Q9NZ94 848 aa13.98□□□□□ -0.17
USP28-214ENST00000545540 NOTOA8MTQ0 251 aa13.97□□□□□ -0.17
USP28-214ENST00000545540 INMT-MINDY4F8WBC2 141 aa13.97□□□□□ -0.17
USP28-214ENST00000545540 RNF13O43567 381 aa13.97□□□□□ -0.17
USP28-214ENST00000545540 TBX19O60806 448 aa13.97□□□□□ -0.17
USP28-214ENST00000545540 FGF19O95750 216 aa13.97□□□□□ -0.17
USP28-214ENST00000545540 IFNA8P32881 189 aa13.97□□□□□ -0.17
USP28-214ENST00000545540 ABATP80404 500 aa13.97□□□□□ -0.17
USP28-214ENST00000545540 DEFB110Q30KQ9 67 aa13.97□□□□□ -0.17
USP28-214ENST00000545540 TP53I3Q53FA7 332 aa13.97□□□□□ -0.17
USP28-214ENST00000545540 AMIGO1Q86WK6 493 aa13.97□□□□□ -0.17
USP28-214ENST00000545540 POGLUT1Q8NBL1 392 aa13.97□□□□□ -0.17
USP28-214ENST00000545540 OR5H6Q8NGV6 325 aa13.97□□□□□ -0.17
USP28-214ENST00000545540 OR2L8Q8NGY9 312 aa13.97□□□□□ -0.17
USP28-214ENST00000545540 HMGB4Q8WW32 186 aa13.97□□□□□ -0.17
USP28-214ENST00000545540 DEDD2Q8WXF8 326 aa13.97□□□□□ -0.17
USP28-214ENST00000545540 PIGKQ92643 395 aa13.97□□□□□ -0.17
USP28-214ENST00000545540 RFKQ969G6 155 aa13.97□□□□□ -0.17
USP28-214ENST00000545540 C4orf36Q96KX1 117 aa13.97□□□□□ -0.17
USP28-214ENST00000545540 ABHD1Q96SE0 405 aa13.97□□□□□ -0.17
USP28-214ENST00000545540 ARHGDIGQ99819 225 aa13.97□□□□□ -0.17
USP28-214ENST00000545540 TMEM168Q9H0V1 697 aa13.97□□□□□ -0.17
USP28-214ENST00000545540 IL21RQ9HBE5 538 aa13.97□□□□□ -0.17
USP28-214ENST00000545540 SIDT1Q9NXL6 827 aaKnown RBP13.97□□□□□ -0.17
USP28-214ENST00000545540 PTPRSQ13332 1948 aa13.97□□□□□ -0.17
USP28-214ENST00000545540 FRYLO94915 3013 aa13.97□□□□□ -0.17
USP28-214ENST00000545540 C4orf47A7E2U8 309 aa13.97□□□□□ -0.17
USP28-214ENST00000545540 CASC3O15234 703 aaKnown RBP13.97□□□□□ -0.17
USP28-214ENST00000545540 ADAM11O75078 769 aa13.97□□□□□ -0.17
USP28-214ENST00000545540 PPP1R3DO95685 299 aa13.97□□□□□ -0.17
USP28-214ENST00000545540 CA3P07451 260 aa13.97□□□□□ -0.17
USP28-214ENST00000545540 IL9P15248 144 aa13.97□□□□□ -0.17
USP28-214ENST00000545540 ARSBP15848 533 aa13.97□□□□□ -0.17
USP28-214ENST00000545540 ACTR1BP42025 376 aa13.97□□□□□ -0.17
USP28-214ENST00000545540 ACTR1AP61163 376 aa13.97□□□□□ -0.17
USP28-214ENST00000545540 PPP1CAP62136 330 aa13.97□□□□□ -0.17
USP28-214ENST00000545540 FAPQ12884 760 aa13.97□□□□□ -0.17
USP28-214ENST00000545540 RUNX3Q13761 415 aa13.97□□□□□ -0.17
USP28-214ENST00000545540 FBXO42Q6P3S6 717 aa13.97□□□□□ -0.17
USP28-214ENST00000545540 PEX5LQ8IYB4 626 aa13.97□□□□□ -0.17
USP28-214ENST00000545540 ACBD7Q8N6N7 88 aa13.97□□□□□ -0.17
USP28-214ENST00000545540 OR4N2Q8NGD1 307 aa13.97□□□□□ -0.17
USP28-214ENST00000545540 OR6C4Q8NGE1 309 aa13.97□□□□□ -0.17
USP28-214ENST00000545540 GRPEL2Q8TAA5 225 aa13.97□□□□□ -0.17
USP28-214ENST00000545540 ZMYND19Q96E35 227 aaPredicted RBP13.97□□□□□ -0.17
USP28-214ENST00000545540 PEX11GQ96HA9 241 aa13.97□□□□□ -0.17
USP28-214ENST00000545540 TMEM43Q9BTV4 400 aa13.97□□□□□ -0.17
USP28-214ENST00000545540 HDAC8Q9BY41 377 aa13.97□□□□□ -0.17
USP28-214ENST00000545540 ABCG5Q9H222 651 aa13.97□□□□□ -0.17
USP28-214ENST00000545540 ADAM29Q9UKF5 820 aa13.97□□□□□ -0.17
USP28-214ENST00000545540 HCRTR1O43613 425 aa13.97□□□□□ -0.17
USP28-214ENST00000545540 ZNF136P52737 540 aa13.97□□□□□ -0.17
USP28-214ENST00000545540 CRMP1Q14194 572 aa13.97□□□□□ -0.17
USP28-214ENST00000545540 GPR176Q14439 515 aa13.97□□□□□ -0.17
USP28-214ENST00000545540 NDUFA5Q16718 116 aa13.97□□□□□ -0.17
USP28-214ENST00000545540 MBOAT2Q6ZWT7 520 aa13.97□□□□□ -0.17
USP28-214ENST00000545540 OR5J2Q8NH18 312 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms