RNA–Protein interactions for RNA: ENST00000544750.1

USP28-212, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-212ENST00000544750 GRAMD1BQ3KR37 738 aa11.38□□□□□ -0.59
USP28-212ENST00000544750 CPTPQ5TA50 214 aa11.38□□□□□ -0.59
USP28-212ENST00000544750 GALNT18Q6P9A2 607 aa11.38□□□□□ -0.59
USP28-212ENST00000544750 FRMD7Q6ZUT3 714 aa11.38□□□□□ -0.59
USP28-212ENST00000544750 ZNF619Q8N2I2 560 aa11.38□□□□□ -0.59
USP28-212ENST00000544750 OR2L13Q8N349 312 aa11.38□□□□□ -0.59
USP28-212ENST00000544750 ROBO4Q8WZ75 1007 aa11.38□□□□□ -0.59
USP28-212ENST00000544750 HOXB13Q92826 284 aaPredicted RBP11.38□□□□□ -0.59
USP28-212ENST00000544750 CCDC126Q96EE4 140 aa11.38□□□□□ -0.59
USP28-212ENST00000544750 KCNA7Q96RP8 456 aa11.38□□□□□ -0.59
USP28-212ENST00000544750 KCNK17Q96T54 332 aa11.38□□□□□ -0.59
USP28-212ENST00000544750 KLHDC3Q9BQ90 382 aa11.38□□□□□ -0.59
USP28-212ENST00000544750 POTEKPQ9BYX7 375 aa11.38□□□□□ -0.59
USP28-212ENST00000544750 TBL1XR1Q9BZK7 514 aa11.38□□□□□ -0.59
USP28-212ENST00000544750 AMBRA1Q9C0C7 1298 aa11.38□□□□□ -0.59
USP28-212ENST00000544750 Q9N2J8 555 aa11.38□□□□□ -0.59
USP28-212ENST00000544750 GIMAP4Q9NUV9 329 aa11.38□□□□□ -0.59
USP28-212ENST00000544750 OXSMQ9NWU1 459 aa11.38□□□□□ -0.59
USP28-212ENST00000544750 SLC17A7Q9P2U7 560 aa11.38□□□□□ -0.59
USP28-212ENST00000544750 A0A1W2PRB8 838 aa11.37□□□□□ -0.59
USP28-212ENST00000544750 GXYLT2A0PJZ3 443 aa11.37□□□□□ -0.59
USP28-212ENST00000544750 ZNF814B7Z6K7 855 aa11.37□□□□□ -0.59
USP28-212ENST00000544750 GMFGO60234 142 aa11.37□□□□□ -0.59
USP28-212ENST00000544750 SPAG7O75391 227 aa11.37□□□□□ -0.59
USP28-212ENST00000544750 SLITRK5O94991 958 aa11.37□□□□□ -0.59
USP28-212ENST00000544750 ADAP00813 363 aa11.37□□□□□ -0.59
USP28-212ENST00000544750 CPA3P15088 417 aa11.37□□□□□ -0.59
USP28-212ENST00000544750 IL32P24001 234 aa11.37□□□□□ -0.59
USP28-212ENST00000544750 SHC1P29353 583 aa11.37□□□□□ -0.59
USP28-212ENST00000544750 TIA1P31483 386 aaKnown RBP eCLIP11.37□□□□□ -0.59
USP28-212ENST00000544750 PSMD4P55036 377 aaKnown RBP11.37□□□□□ -0.59
USP28-212ENST00000544750 PKNOX1P55347 436 aa11.37□□□□□ -0.59
USP28-212ENST00000544750 SRSF2Q01130 221 aaKnown RBP11.37□□□□□ -0.59
USP28-212ENST00000544750 P2RY6Q15077 328 aa11.37□□□□□ -0.59
USP28-212ENST00000544750 ZNF239Q16600 458 aaKnown RBP11.37□□□□□ -0.59
USP28-212ENST00000544750 HBMQ6B0K9 141 aa11.37□□□□□ -0.59
USP28-212ENST00000544750 GTF2IRD2BQ6EKJ0 949 aa11.37□□□□□ -0.59
USP28-212ENST00000544750 TMEM107Q6UX40 140 aa11.37□□□□□ -0.59
USP28-212ENST00000544750 GTF2IRD2Q86UP8 949 aa11.37□□□□□ -0.59
USP28-212ENST00000544750 C10orf107Q8IVU9 208 aa11.37□□□□□ -0.59
USP28-212ENST00000544750 TUSC5Q8IXB3 177 aa11.37□□□□□ -0.59
USP28-212ENST00000544750 CCNYL1Q8N7R7 359 aa11.37□□□□□ -0.59
USP28-212ENST00000544750 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.37□□□□□ -0.59
USP28-212ENST00000544750 ACTRT2Q8TDY3 377 aa11.37□□□□□ -0.59
USP28-212ENST00000544750 ABHD3Q8WU67 409 aa11.37□□□□□ -0.59
USP28-212ENST00000544750 SLC9A6Q92581 669 aa11.37□□□□□ -0.59
USP28-212ENST00000544750 OSTF1Q92882 214 aa11.37□□□□□ -0.59
USP28-212ENST00000544750 ZBTB8AQ96BR9 441 aa11.37□□□□□ -0.59
USP28-212ENST00000544750 APIPQ96GX9 242 aa11.37□□□□□ -0.59
USP28-212ENST00000544750 RNF145Q96MT1 663 aa11.37□□□□□ -0.59
USP28-212ENST00000544750 USB1Q9BQ65 265 aaKnown RBP11.37□□□□□ -0.59
USP28-212ENST00000544750 ACPTQ9BZG2 426 aa11.37□□□□□ -0.59
USP28-212ENST00000544750 GLIPR2Q9H4G4 154 aa11.37□□□□□ -0.59
USP28-212ENST00000544750 ALG2Q9H553 416 aa11.37□□□□□ -0.59
USP28-212ENST00000544750 MED17Q9NVC6 651 aa11.37□□□□□ -0.59
USP28-212ENST00000544750 SIRT5Q9NXA8 310 aa11.37□□□□□ -0.59
USP28-212ENST00000544750 TAS2R7Q9NYW3 318 aa11.37□□□□□ -0.59
USP28-212ENST00000544750 SENP1Q9P0U3 644 aa11.37□□□□□ -0.59
USP28-212ENST00000544750 KLHL13Q9P2N7 655 aa11.37□□□□□ -0.59
USP28-212ENST00000544750 MRTO4Q9UKD2 239 aaKnown RBP11.37□□□□□ -0.59
USP28-212ENST00000544750 TIMM22Q9Y584 194 aa11.37□□□□□ -0.59
USP28-212ENST00000544750 GNG14A0A1W2PPG7 69 aa11.36□□□□□ -0.59
USP28-212ENST00000544750 HAX1O00165 279 aa11.36□□□□□ -0.59
USP28-212ENST00000544750 WIPF1O43516 503 aa11.36□□□□□ -0.59
USP28-212ENST00000544750 TYROBPO43914 113 aa11.36□□□□□ -0.59
USP28-212ENST00000544750 EFNA2O43921 213 aa11.36□□□□□ -0.59
USP28-212ENST00000544750 JUNP05412 331 aaKnown RBP11.36□□□□□ -0.59
USP28-212ENST00000544750 ENO1P06733 434 aaKnown RBP11.36□□□□□ -0.59
USP28-212ENST00000544750 FESP07332 822 aa11.36□□□□□ -0.59
USP28-212ENST00000544750 NGFRP08138 427 aa11.36□□□□□ -0.59
USP28-212ENST00000544750 IFI6P09912 130 aa11.36□□□□□ -0.59
USP28-212ENST00000544750 IGHV4-31P0DP07 118 aa11.36□□□□□ -0.59
USP28-212ENST00000544750 SLC25A16P16260 332 aa11.36□□□□□ -0.59
USP28-212ENST00000544750 DDCP20711 480 aa11.36□□□□□ -0.59
USP28-212ENST00000544750 PTNP21246 168 aa11.36□□□□□ -0.59
USP28-212ENST00000544750 NUDT6P53370 316 aa11.36□□□□□ -0.59
USP28-212ENST00000544750 DSCR9P59020 149 aa11.36□□□□□ -0.59
USP28-212ENST00000544750 ITGADQ13349 1161 aa11.36□□□□□ -0.59
USP28-212ENST00000544750 TNFAIP8L3Q5GJ75 292 aa11.36□□□□□ -0.59
USP28-212ENST00000544750 TMEM201Q5SNT2 666 aa11.36□□□□□ -0.59
USP28-212ENST00000544750 LIPMQ5VYY2 423 aa11.36□□□□□ -0.59
USP28-212ENST00000544750 ARIH2OSQ8N7S6 290 aa11.36□□□□□ -0.59
USP28-212ENST00000544750 OR4C3Q8NH37 302 aa11.36□□□□□ -0.59
USP28-212ENST00000544750 KISS1RQ969F8 398 aaPredicted RBP11.36□□□□□ -0.59
USP28-212ENST00000544750 ELP4Q96EB1 424 aa11.36□□□□□ -0.59
USP28-212ENST00000544750 KLHL15Q96M94 604 aa11.36□□□□□ -0.59
USP28-212ENST00000544750 ZIM3Q96PE6 472 aa11.36□□□□□ -0.59
USP28-212ENST00000544750 BBS4Q96RK4 519 aa11.36□□□□□ -0.59
USP28-212ENST00000544750 MECRQ9BV79 373 aa11.36□□□□□ -0.59
USP28-212ENST00000544750 CACNG6Q9BXT2 260 aa11.36□□□□□ -0.59
USP28-212ENST00000544750 SRXN1Q9BYN0 137 aa11.36□□□□□ -0.59
USP28-212ENST00000544750 SHARPINQ9H0F6 387 aa11.36□□□□□ -0.59
USP28-212ENST00000544750 TMEM185BQ9H7F4 350 aa11.36□□□□□ -0.59
USP28-212ENST00000544750 GP6Q9HCN6 339 aa11.36□□□□□ -0.59
USP28-212ENST00000544750 MID1IP1Q9NPA3 183 aa11.36□□□□□ -0.59
USP28-212ENST00000544750 FAIMQ9NVQ4 179 aa11.36□□□□□ -0.59
USP28-212ENST00000544750 NPAP1Q9NZP6 1156 aa11.36□□□□□ -0.59
USP28-212ENST00000544750 ING1Q9UK53 422 aaPredicted RBP11.36□□□□□ -0.59
USP28-212ENST00000544750 STK38LQ9Y2H1 464 aa11.36□□□□□ -0.59
USP28-212ENST00000544750 NUP214P35658 2090 aaPredicted RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms