RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 OPRL1P41146 370 aa12.01□□□□□ -0.49
CHD4-211ENST00000544484 PPP5CP53041 499 aa12.01□□□□□ -0.49
CHD4-211ENST00000544484 MRPS21P82921 87 aaKnown RBP12.01□□□□□ -0.49
CHD4-211ENST00000544484 TAP2Q03519 686 aa12.01□□□□□ -0.49
CHD4-211ENST00000544484 MFSD13AQ14CX5 517 aa12.01□□□□□ -0.49
CHD4-211ENST00000544484 CCSMST1Q4G0I0 132 aa12.01□□□□□ -0.49
CHD4-211ENST00000544484 TMEM205Q6UW68 189 aa12.01□□□□□ -0.49
CHD4-211ENST00000544484 RTL10Q7L3V2 364 aa12.01□□□□□ -0.49
CHD4-211ENST00000544484 CLEC14AQ86T13 490 aa12.01□□□□□ -0.49
CHD4-211ENST00000544484 ANKRD13BQ86YJ7 626 aa12.01□□□□□ -0.49
CHD4-211ENST00000544484 ARL6Q9H0F7 186 aa12.01□□□□□ -0.49
CHD4-211ENST00000544484 PAQR5Q9NXK6 330 aaPredicted RBP12.01□□□□□ -0.49
CHD4-211ENST00000544484 SRPK3Q9UPE1 567 aa12.01□□□□□ -0.49
CHD4-211ENST00000544484 HIF3AQ9Y2N7 669 aa12.01□□□□□ -0.49
CHD4-211ENST00000544484 HRGP04196 525 aa12.01□□□□□ -0.49
CHD4-211ENST00000544484 UGT2B7P16662 529 aa12.01□□□□□ -0.49
CHD4-211ENST00000544484 NR4A2P43354 598 aa12.01□□□□□ -0.49
CHD4-211ENST00000544484 NKX2-5P52952 324 aaPredicted RBP12.01□□□□□ -0.49
CHD4-211ENST00000544484 COL28A1Q2UY09 1125 aa12.01□□□□□ -0.49
CHD4-211ENST00000544484 RSPO2Q6UXX9 243 aaPredicted RBP12.01□□□□□ -0.49
CHD4-211ENST00000544484 ZNF709Q8N972 641 aa12.01□□□□□ -0.49
CHD4-211ENST00000544484 ITFG2Q969R8 447 aa12.01□□□□□ -0.49
CHD4-211ENST00000544484 TREX2Q9BQ50 279 aaPredicted RBP12.01□□□□□ -0.49
CHD4-211ENST00000544484 NXF5Q9H1B4 397 aaKnown RBP12.01□□□□□ -0.49
CHD4-211ENST00000544484 ZNF160Q9HCG1 818 aa12.01□□□□□ -0.49
CHD4-211ENST00000544484 MAN2C1Q9NTJ4 1040 aa12.01□□□□□ -0.49
CHD4-211ENST00000544484 MPIG6BO95866 241 aa12□□□□□ -0.49
CHD4-211ENST00000544484 GM2AP17900 193 aa12□□□□□ -0.49
CHD4-211ENST00000544484 CRABP1P29762 137 aa12□□□□□ -0.49
CHD4-211ENST00000544484 PGFP49763 221 aa12□□□□□ -0.49
CHD4-211ENST00000544484 OR1Q1Q15612 314 aa12□□□□□ -0.49
CHD4-211ENST00000544484 MTFR2Q6P444 385 aa12□□□□□ -0.49
CHD4-211ENST00000544484 FAM111BQ6SJ93 734 aa12□□□□□ -0.49
CHD4-211ENST00000544484 DNAAF1Q8NEP3 725 aa12□□□□□ -0.49
CHD4-211ENST00000544484 PITHD1Q9GZP4 211 aaPredicted RBP12□□□□□ -0.49
CHD4-211ENST00000544484 CREBL2O60519 120 aaPredicted RBP12□□□□□ -0.49
CHD4-211ENST00000544484 RPS5P46782 204 aaKnown RBP12□□□□□ -0.49
CHD4-211ENST00000544484 EEF1A1P68104 462 aaKnown RBP12□□□□□ -0.49
CHD4-211ENST00000544484 GNMTQ14749 295 aa12□□□□□ -0.49
CHD4-211ENST00000544484 FRMPD2BQ6IN97 320 aa12□□□□□ -0.49
CHD4-211ENST00000544484 BEST3Q8N1M1 668 aa12□□□□□ -0.49
CHD4-211ENST00000544484 METTL25Q8N6Q8 603 aa12□□□□□ -0.49
CHD4-211ENST00000544484 MAP3K3Q99759 626 aa12□□□□□ -0.49
CHD4-211ENST00000544484 CUTCQ9NTM9 273 aa12□□□□□ -0.49
CHD4-211ENST00000544484 VSX1Q9NZR4 365 aaPredicted RBP12□□□□□ -0.49
CHD4-211ENST00000544484 RP1L1Q8IWN7 2480 aaPredicted RBP12□□□□□ -0.49
CHD4-211ENST00000544484 GJE1A6NN92 205 aa12□□□□□ -0.49
CHD4-211ENST00000544484 CA5AP35218 305 aa12□□□□□ -0.49
CHD4-211ENST00000544484 CASP6P55212 293 aa12□□□□□ -0.49
CHD4-211ENST00000544484 Q6ZSR9 355 aa12□□□□□ -0.49
CHD4-211ENST00000544484 CHDHQ8NE62 594 aaPredicted RBP12□□□□□ -0.49
CHD4-211ENST00000544484 FNDC8Q8TC99 324 aa12□□□□□ -0.49
CHD4-211ENST00000544484 ABHD5Q8WTS1 349 aa12□□□□□ -0.49
CHD4-211ENST00000544484 MAELQ96JY0 434 aaKnown RBP12□□□□□ -0.49
CHD4-211ENST00000544484 ZNF597Q96LX8 424 aa12□□□□□ -0.49
CHD4-211ENST00000544484 PISDQ9UG56 409 aa12□□□□□ -0.49
CHD4-211ENST00000544484 ALS2Q96Q42 1657 aa12□□□□□ -0.49
CHD4-211ENST00000544484 SLX4Q8IY92 1834 aa12□□□□□ -0.49
CHD4-211ENST00000544484 C17orf113A0A1B0GUU1 675 aa12□□□□□ -0.49
CHD4-211ENST00000544484 BCAT2O15382 392 aaPredicted RBP12□□□□□ -0.49
CHD4-211ENST00000544484 DIRAS3O95661 229 aa12□□□□□ -0.49
CHD4-211ENST00000544484 TRA2BP62995 288 aaKnown RBP12□□□□□ -0.49
CHD4-211ENST00000544484 KCNJ10P78508 379 aa12□□□□□ -0.49
CHD4-211ENST00000544484 ARF1P84077 181 aaKnown RBP12□□□□□ -0.49
CHD4-211ENST00000544484 RPL19P84098 196 aaKnown RBP12□□□□□ -0.49
CHD4-211ENST00000544484 LTB4RQ15722 352 aa12□□□□□ -0.49
CHD4-211ENST00000544484 C18orf63Q68DL7 685 aa12□□□□□ -0.49
CHD4-211ENST00000544484 NECAB3Q96P71 396 aaPredicted RBP12□□□□□ -0.49
CHD4-211ENST00000544484 NUDT22Q9BRQ3 303 aa12□□□□□ -0.49
CHD4-211ENST00000544484 PLEK2Q9NYT0 353 aa12□□□□□ -0.49
CHD4-211ENST00000544484 MEIS3P1A6NDR6 274 aa12□□□□□ -0.49
CHD4-211ENST00000544484 AGAP5A6NIR3 686 aa12□□□□□ -0.49
CHD4-211ENST00000544484 H3BNC9 293 aa12□□□□□ -0.49
CHD4-211ENST00000544484 UBFD1O14562 309 aaKnown RBP12□□□□□ -0.49
CHD4-211ENST00000544484 OR2T1O43869 369 aa12□□□□□ -0.49
CHD4-211ENST00000544484 SLC16A7O60669 478 aa12□□□□□ -0.49
CHD4-211ENST00000544484 CRTAPO75718 401 aaPredicted RBP12□□□□□ -0.49
CHD4-211ENST00000544484 ABLIM3O94929 683 aa12□□□□□ -0.49
CHD4-211ENST00000544484 GLO1Q04760 184 aa12□□□□□ -0.49
CHD4-211ENST00000544484 IL20RBQ6UXL0 311 aa12□□□□□ -0.49
CHD4-211ENST00000544484 BAIAP2L2Q6UXY1 529 aa12□□□□□ -0.49
CHD4-211ENST00000544484 PPP1R3BQ86XI6 285 aa12□□□□□ -0.49
CHD4-211ENST00000544484 TMEM246Q9BRR3 403 aa12□□□□□ -0.49
CHD4-211ENST00000544484 EGLN3Q9H6Z9 239 aa12□□□□□ -0.49
CHD4-211ENST00000544484 SLC35A3Q9Y2D2 325 aa12□□□□□ -0.49
CHD4-211ENST00000544484 YARS2Q9Y2Z4 477 aaKnown RBP12□□□□□ -0.49
CHD4-211ENST00000544484 UBE2J1Q9Y385 318 aaPredicted RBP12□□□□□ -0.49
CHD4-211ENST00000544484 F13BP05160 661 aa11.99□□□□□ -0.49
CHD4-211ENST00000544484 POLR2IP36954 125 aaKnown RBP11.99□□□□□ -0.49
CHD4-211ENST00000544484 SEMA3BQ13214 749 aa11.99□□□□□ -0.49
CHD4-211ENST00000544484 MRPL2Q5T653 305 aaKnown RBP11.99□□□□□ -0.49
CHD4-211ENST00000544484 SBSNQ6UWP8 590 aa11.99□□□□□ -0.49
CHD4-211ENST00000544484 OR51Q1Q8NH59 317 aa11.99□□□□□ -0.49
CHD4-211ENST00000544484 SFXN5Q8TD22 340 aa11.99□□□□□ -0.49
CHD4-211ENST00000544484 ZNF775Q96BV0 537 aaPredicted RBP11.99□□□□□ -0.49
CHD4-211ENST00000544484 HINT2Q9BX68 163 aa11.99□□□□□ -0.49
CHD4-211ENST00000544484 SMCO3A2RU48 225 aa11.99□□□□□ -0.49
CHD4-211ENST00000544484 FTCDNL1E5RQL4 147 aa11.99□□□□□ -0.49
CHD4-211ENST00000544484 AQP9O43315 295 aa11.99□□□□□ -0.49
CHD4-211ENST00000544484 MMP12P39900 470 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms