RNA–Protein interactions for RNA: ENST00000543170.5

COPS7A-216, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-216ENST00000543170 TMEM44Q2T9K0 475 aa16.66■□□□□ 0.26
COPS7A-216ENST00000543170 DCST1Q5T197 706 aa16.66■□□□□ 0.26
COPS7A-216ENST00000543170 RAET1LQ5VY80 246 aa16.66■□□□□ 0.26
COPS7A-216ENST00000543170 TMEM211Q6ICI0 200 aa16.66■□□□□ 0.26
COPS7A-216ENST00000543170 OLIG3Q7RTU3 272 aa16.66■□□□□ 0.26
COPS7A-216ENST00000543170 CMIPQ8IY22 773 aa16.66■□□□□ 0.26
COPS7A-216ENST00000543170 ULK2Q8IYT8 1036 aa16.66■□□□□ 0.26
COPS7A-216ENST00000543170 METTL25Q8N6Q8 603 aa16.66■□□□□ 0.26
COPS7A-216ENST00000543170 FAM71CQ8NEG0 241 aa16.66■□□□□ 0.26
COPS7A-216ENST00000543170 OR5M9Q8NGP3 310 aa16.66■□□□□ 0.26
COPS7A-216ENST00000543170 MED12Q93074 2177 aa16.66■□□□□ 0.26
COPS7A-216ENST00000543170 ARSGQ96EG1 525 aa16.66■□□□□ 0.26
COPS7A-216ENST00000543170 WDYHV1Q96HA8 205 aa16.66■□□□□ 0.26
COPS7A-216ENST00000543170 A4GALTQ9NPC4 353 aa16.66■□□□□ 0.26
COPS7A-216ENST00000543170 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.66■□□□□ 0.26
COPS7A-216ENST00000543170 ARHGAP21Q5T5U3 1957 aa16.66■□□□□ 0.26
COPS7A-216ENST00000543170 EVPLLA8MZ36 301 aa16.65■□□□□ 0.26
COPS7A-216ENST00000543170 FAM47E-STBD1D6RA91 191 aa16.65■□□□□ 0.26
COPS7A-216ENST00000543170 BCHEP06276 602 aa16.65■□□□□ 0.26
COPS7A-216ENST00000543170 RNF224P0DH78 156 aa16.65■□□□□ 0.26
COPS7A-216ENST00000543170 AGAP20933 346 aa16.65■□□□□ 0.26
COPS7A-216ENST00000543170 ZNF41P51814 821 aaPredicted RBP16.65■□□□□ 0.26
COPS7A-216ENST00000543170 ADORA2A-AS1P86434 159 aa16.65■□□□□ 0.26
COPS7A-216ENST00000543170 SKP2Q13309 424 aa16.65■□□□□ 0.26
COPS7A-216ENST00000543170 NFYCQ13952 458 aa16.65■□□□□ 0.26
COPS7A-216ENST00000543170 MAPK14Q16539 360 aa16.65■□□□□ 0.26
COPS7A-216ENST00000543170 BCL2A1Q16548 175 aa16.65■□□□□ 0.26
COPS7A-216ENST00000543170 TRMT5Q32P41 509 aaKnown RBP16.65■□□□□ 0.26
COPS7A-216ENST00000543170 PLPPR5Q32ZL2 321 aa16.65■□□□□ 0.26
COPS7A-216ENST00000543170 RUNDC3AQ59EK9 446 aa16.65■□□□□ 0.26
COPS7A-216ENST00000543170 C1orf185Q5T7R7 199 aa16.65■□□□□ 0.26
COPS7A-216ENST00000543170 ZNF585AQ6P3V2 769 aa16.65■□□□□ 0.26
COPS7A-216ENST00000543170 CBLN3Q6UW01 205 aa16.65■□□□□ 0.26
COPS7A-216ENST00000543170 ARSKQ6UWY0 536 aa16.65■□□□□ 0.26
COPS7A-216ENST00000543170 EIF3MQ7L2H7 374 aaKnown RBP16.65■□□□□ 0.26
COPS7A-216ENST00000543170 SLC38A5Q8WUX1 472 aa16.65■□□□□ 0.26
COPS7A-216ENST00000543170 SH3YL1Q96HL8 342 aaPredicted RBP16.65■□□□□ 0.26
COPS7A-216ENST00000543170 ANKRD27Q96NW4 1050 aa16.65■□□□□ 0.26
COPS7A-216ENST00000543170 CGREF1Q99674 301 aa16.65■□□□□ 0.26
COPS7A-216ENST00000543170 ELAC2Q9BQ52 826 aaKnown RBP16.65■□□□□ 0.26
COPS7A-216ENST00000543170 LAT2Q9GZY6 243 aa16.65■□□□□ 0.26
COPS7A-216ENST00000543170 MTHFD2LQ9H903 347 aaPredicted RBP16.65■□□□□ 0.26
COPS7A-216ENST00000543170 MED17Q9NVC6 651 aa16.65■□□□□ 0.26
COPS7A-216ENST00000543170 FAM53CQ9NYF3 392 aa16.65■□□□□ 0.26
COPS7A-216ENST00000543170 CARD8Q9Y2G2 431 aa16.65■□□□□ 0.26
COPS7A-216ENST00000543170 RPH3AQ9Y2J0 694 aaPredicted RBP16.65■□□□□ 0.26
COPS7A-216ENST00000543170 FAM215AQ9Y5M1 114 aa16.65■□□□□ 0.26
COPS7A-216ENST00000543170 PTPN13Q12923 2485 aa16.65■□□□□ 0.26
COPS7A-216ENST00000543170 HEATR5AQ86XA9 2040 aa16.65■□□□□ 0.26
COPS7A-216ENST00000543170 SPTAN1Q13813 2472 aaKnown RBP16.64■□□□□ 0.26
COPS7A-216ENST00000543170 OR2M5A3KFT3 312 aa16.64■□□□□ 0.25
COPS7A-216ENST00000543170 GTPBP1O00178 669 aaKnown RBP16.64■□□□□ 0.25
COPS7A-216ENST00000543170 FBP2O00757 339 aa16.64■□□□□ 0.25
COPS7A-216ENST00000543170 ZG16O60844 167 aa16.64■□□□□ 0.25
COPS7A-216ENST00000543170 DNAJA2O60884 412 aa16.64■□□□□ 0.25
COPS7A-216ENST00000543170 CSTAP01040 98 aa16.64■□□□□ 0.25
COPS7A-216ENST00000543170 NPPAP01160 153 aa16.64■□□□□ 0.25
COPS7A-216ENST00000543170 ZNF708P17019 499 aa16.64■□□□□ 0.25
COPS7A-216ENST00000543170 PGM1P36871 562 aa16.64■□□□□ 0.25
COPS7A-216ENST00000543170 LHX2P50458 406 aa16.64■□□□□ 0.25
COPS7A-216ENST00000543170 GCNT6Q5T4J0 391 aa16.64■□□□□ 0.25
COPS7A-216ENST00000543170 RTL6Q6ICC9 239 aa16.64■□□□□ 0.25
COPS7A-216ENST00000543170 B3GNT6Q6ZMB0 384 aa16.64■□□□□ 0.25
COPS7A-216ENST00000543170 C3P1Q6ZMU1 363 aa16.64■□□□□ 0.25
COPS7A-216ENST00000543170 CPLX4Q7Z7G2 160 aa16.64■□□□□ 0.25
COPS7A-216ENST00000543170 GTPBP8Q8N3Z3 284 aaPredicted RBP16.64■□□□□ 0.25
COPS7A-216ENST00000543170 MARVELD2Q8N4S9 558 aa16.64■□□□□ 0.25
COPS7A-216ENST00000543170 ZNF808Q8N4W9 903 aaPredicted RBP16.64■□□□□ 0.25
COPS7A-216ENST00000543170 OR5W2Q8NH69 310 aa16.64■□□□□ 0.25
COPS7A-216ENST00000543170 TMEM19Q96HH6 336 aa16.64■□□□□ 0.25
COPS7A-216ENST00000543170 TREX2Q9BQ50 279 aaPredicted RBP16.64■□□□□ 0.25
COPS7A-216ENST00000543170 IKZF5Q9H5V7 419 aa16.64■□□□□ 0.25
COPS7A-216ENST00000543170 TMEM38AQ9H6F2 299 aa16.64■□□□□ 0.25
COPS7A-216ENST00000543170 BCL2L10Q9HD36 194 aa16.64■□□□□ 0.25
COPS7A-216ENST00000543170 EXOSC3Q9NQT5 275 aaKnown RBP16.64■□□□□ 0.25
COPS7A-216ENST00000543170 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.64■□□□□ 0.25
COPS7A-216ENST00000543170 VDAC3Q9Y277 283 aa16.64■□□□□ 0.25
COPS7A-216ENST00000543170 PCNX1Q96RV3 2341 aa16.64■□□□□ 0.25
COPS7A-216ENST00000543170 SPTBN1Q01082 2364 aaKnown RBP16.63■□□□□ 0.25
COPS7A-216ENST00000543170 A0A0G2JPF8 293 aa16.63■□□□□ 0.25
COPS7A-216ENST00000543170 HNRNPCL2B2RXH8 293 aa16.63■□□□□ 0.25
COPS7A-216ENST00000543170 HNRNPCL3B7ZW38 293 aa16.63■□□□□ 0.25
COPS7A-216ENST00000543170 ETV2O00321 342 aaPredicted RBP16.63■□□□□ 0.25
COPS7A-216ENST00000543170 OIP5O43482 229 aa16.63■□□□□ 0.25
COPS7A-216ENST00000543170 HNRNPCL1O60812 293 aaKnown RBP16.63■□□□□ 0.25
COPS7A-216ENST00000543170 DBIP07108 87 aaKnown RBP16.63■□□□□ 0.25
COPS7A-216ENST00000543170 NUDT7P0C024 238 aa16.63■□□□□ 0.25
COPS7A-216ENST00000543170 LINGO3P0C6S8 592 aa16.63■□□□□ 0.25
COPS7A-216ENST00000543170 HNRNPCL4P0DMR1 293 aa16.63■□□□□ 0.25
COPS7A-216ENST00000543170 ARAFP10398 606 aa16.63■□□□□ 0.25
COPS7A-216ENST00000543170 PEPDP12955 493 aa16.63■□□□□ 0.25
COPS7A-216ENST00000543170 NID1P14543 1247 aa16.63■□□□□ 0.25
COPS7A-216ENST00000543170 ELK4P28324 431 aa16.63■□□□□ 0.25
COPS7A-216ENST00000543170 ADH6P28332 368 aa16.63■□□□□ 0.25
COPS7A-216ENST00000543170 EIF1P41567 113 aaKnown RBP16.63■□□□□ 0.25
COPS7A-216ENST00000543170 SMSP52788 366 aa16.63■□□□□ 0.25
COPS7A-216ENST00000543170 CLDN18P56856 261 aa16.63■□□□□ 0.25
COPS7A-216ENST00000543170 KCNJ10P78508 379 aa16.63■□□□□ 0.25
COPS7A-216ENST00000543170 CBFBQ13951 182 aa16.63■□□□□ 0.25
COPS7A-216ENST00000543170 ACSF3Q4G176 576 aaPredicted RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms