RNA–Protein interactions for RNA: ENST00000542460.5

LIG1-204, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-204ENST00000542460 PGM1P36871 562 aa15.6■□□□□ 0.09
LIG1-204ENST00000542460 PPIAP62937 165 aaKnown RBP15.6■□□□□ 0.09
LIG1-204ENST00000542460 EEF1A1P68104 462 aaKnown RBP15.6■□□□□ 0.09
LIG1-204ENST00000542460 ZNF117Q03924 483 aa15.6■□□□□ 0.09
LIG1-204ENST00000542460 FXNQ16595 210 aa15.6■□□□□ 0.09
LIG1-204ENST00000542460 RNFT1Q5M7Z0 435 aa15.6■□□□□ 0.09
LIG1-204ENST00000542460 MRPL2Q5T653 305 aaKnown RBP15.6■□□□□ 0.09
LIG1-204ENST00000542460 FAM180AQ6UWF9 173 aa15.6■□□□□ 0.09
LIG1-204ENST00000542460 ZNF836Q6ZNA1 936 aa15.6■□□□□ 0.09
LIG1-204ENST00000542460 CISD2Q8N5K1 135 aaKnown RBP15.6■□□□□ 0.09
LIG1-204ENST00000542460 FADS6Q8N9I5 356 aa15.6■□□□□ 0.09
LIG1-204ENST00000542460 OR4K17Q8NGC6 315 aa15.6■□□□□ 0.09
LIG1-204ENST00000542460 B4GALNT2Q8NHY0 566 aa15.6■□□□□ 0.09
LIG1-204ENST00000542460 SLC26A7Q8TE54 656 aa15.6■□□□□ 0.09
LIG1-204ENST00000542460 RASSF5Q8WWW0 418 aa15.6■□□□□ 0.09
LIG1-204ENST00000542460 SH3YL1Q96HL8 342 aaPredicted RBP15.6■□□□□ 0.09
LIG1-204ENST00000542460 LAT2Q9GZY6 243 aa15.6■□□□□ 0.09
LIG1-204ENST00000542460 DSN1Q9H410 356 aa15.6■□□□□ 0.09
LIG1-204ENST00000542460 PTGES2Q9H7Z7 377 aa15.6■□□□□ 0.09
LIG1-204ENST00000542460 MED11Q9P086 117 aa15.6■□□□□ 0.09
LIG1-204ENST00000542460 EGFL7Q9UHF1 273 aa15.6■□□□□ 0.09
LIG1-204ENST00000542460 C15orf41Q9Y2V0 281 aa15.6■□□□□ 0.09
LIG1-204ENST00000542460 CDHR4A6H8M9 788 aa15.59■□□□□ 0.09
LIG1-204ENST00000542460 TTLL8A6PVC2 850 aa15.59■□□□□ 0.09
LIG1-204ENST00000542460 GSC2O15499 205 aa15.59■□□□□ 0.09
LIG1-204ENST00000542460 UBTFL6P0CB48 400 aaPredicted RBP15.59■□□□□ 0.09
LIG1-204ENST00000542460 ME2P23368 584 aa15.59■□□□□ 0.09
LIG1-204ENST00000542460 P2RX1P51575 399 aa15.59■□□□□ 0.09
LIG1-204ENST00000542460 DMTNQ08495 405 aa15.59■□□□□ 0.09
LIG1-204ENST00000542460 BNIP2Q12982 314 aa15.59■□□□□ 0.09
LIG1-204ENST00000542460 SKP2Q13309 424 aa15.59■□□□□ 0.09
LIG1-204ENST00000542460 EIPR1Q53HC9 387 aa15.59■□□□□ 0.09
LIG1-204ENST00000542460 GLYATQ6IB77 296 aa15.59■□□□□ 0.09
LIG1-204ENST00000542460 DHRS4L2Q6PKH6 230 aa15.59■□□□□ 0.09
LIG1-204ENST00000542460 CBLN3Q6UW01 205 aa15.59■□□□□ 0.09
LIG1-204ENST00000542460 GRAMD2AQ8IUY3 354 aa15.59■□□□□ 0.09
LIG1-204ENST00000542460 FAM71CQ8NEG0 241 aa15.59■□□□□ 0.09
LIG1-204ENST00000542460 OR2M3Q8NG83 312 aa15.59■□□□□ 0.09
LIG1-204ENST00000542460 TAMM41Q96BW9 452 aa15.59■□□□□ 0.09
LIG1-204ENST00000542460 PINK1Q9BXM7 581 aa15.59■□□□□ 0.09
LIG1-204ENST00000542460 LRMDAQ9H2I8 198 aa15.59■□□□□ 0.09
LIG1-204ENST00000542460 UBQLN3Q9H347 655 aa15.59■□□□□ 0.09
LIG1-204ENST00000542460 ZNF703Q9H7S9 590 aaPredicted RBP15.59■□□□□ 0.09
LIG1-204ENST00000542460 EXOSC3Q9NQT5 275 aaKnown RBP15.59■□□□□ 0.09
LIG1-204ENST00000542460 RLIMQ9NVW2 624 aa15.59■□□□□ 0.09
LIG1-204ENST00000542460 QPCTLQ9NXS2 382 aa15.59■□□□□ 0.09
LIG1-204ENST00000542460 FBXL2Q9UKC9 423 aa15.59■□□□□ 0.09
LIG1-204ENST00000542460 ICAM5Q9UMF0 924 aa15.59■□□□□ 0.09
LIG1-204ENST00000542460 HRH3Q9Y5N1 445 aa15.59■□□□□ 0.09
LIG1-204ENST00000542460 FAM166BA8MTA8 275 aa15.58■□□□□ 0.09
LIG1-204ENST00000542460 B4DXG7 233 aa15.58■□□□□ 0.09
LIG1-204ENST00000542460 TFECO14948 347 aaPredicted RBP15.58■□□□□ 0.09
LIG1-204ENST00000542460 OIP5O43482 229 aa15.58■□□□□ 0.09
LIG1-204ENST00000542460 CYP7B1O75881 506 aa15.58■□□□□ 0.09
LIG1-204ENST00000542460 OPN1SWP03999 348 aa15.58■□□□□ 0.09
LIG1-204ENST00000542460 GDF1P27539 372 aa15.58■□□□□ 0.09
LIG1-204ENST00000542460 MSX2P35548 267 aaPredicted RBP15.58■□□□□ 0.09
LIG1-204ENST00000542460 CRYBA2P53672 197 aa15.58■□□□□ 0.09
LIG1-204ENST00000542460 NCALDP61601 193 aa15.58■□□□□ 0.09
LIG1-204ENST00000542460 ALDH6A1Q02252 535 aaKnown RBP15.58■□□□□ 0.09
LIG1-204ENST00000542460 LRRC23Q53EV4 343 aaPredicted RBP15.58■□□□□ 0.09
LIG1-204ENST00000542460 CLIP4Q8N3C7 705 aa15.58■□□□□ 0.09
LIG1-204ENST00000542460 FAM109AQ8N4B1 249 aa15.58■□□□□ 0.09
LIG1-204ENST00000542460 TMEM251Q8N6I4 163 aa15.58■□□□□ 0.09
LIG1-204ENST00000542460 SMYD1Q8NB12 490 aa15.58■□□□□ 0.09
LIG1-204ENST00000542460 TOR1AIP2Q8NFQ8 470 aa15.58■□□□□ 0.09
LIG1-204ENST00000542460 CNOT9Q92600 299 aaKnown RBP15.58■□□□□ 0.09
LIG1-204ENST00000542460 MCUR1Q96AQ8 359 aa15.58■□□□□ 0.09
LIG1-204ENST00000542460 SNRNP40Q96DI7 357 aaKnown RBP15.58■□□□□ 0.09
LIG1-204ENST00000542460 RSPO3Q9BXY4 272 aaPredicted RBP15.58■□□□□ 0.09
LIG1-204ENST00000542460 CADM1Q9BY67 442 aaKnown RBP15.58■□□□□ 0.09
LIG1-204ENST00000542460 DNAJB12Q9NXW2 375 aaKnown RBP15.58■□□□□ 0.09
LIG1-204ENST00000542460 MAGEL2Q9UJ55 1249 aa15.58■□□□□ 0.09
LIG1-204ENST00000542460 CHST2Q9Y4C5 530 aa15.58■□□□□ 0.09
LIG1-204ENST00000542460 TPST1O60507 370 aa15.58■□□□□ 0.08
LIG1-204ENST00000542460 BCAS1O75363 584 aaPredicted RBP15.58■□□□□ 0.08
LIG1-204ENST00000542460 PDE5AO76074 875 aa15.58■□□□□ 0.08
LIG1-204ENST00000542460 C8BP07358 591 aa15.58■□□□□ 0.08
LIG1-204ENST00000542460 NCK1P16333 377 aa15.58■□□□□ 0.08
LIG1-204ENST00000542460 MAGEA5P43359 124 aa15.58■□□□□ 0.08
LIG1-204ENST00000542460 KCNJ5P48544 419 aa15.58■□□□□ 0.08
LIG1-204ENST00000542460 SUMO3P55854 103 aaPredicted RBP15.58■□□□□ 0.08
LIG1-204ENST00000542460 DSCR4P56555 118 aaPredicted RBP15.58■□□□□ 0.08
LIG1-204ENST00000542460 PLAURQ03405 335 aa15.58■□□□□ 0.08
LIG1-204ENST00000542460 ELOAQ14241 798 aaKnown RBP15.58■□□□□ 0.08
LIG1-204ENST00000542460 TRIM25Q14258 630 aaKnown RBP15.58■□□□□ 0.08
LIG1-204ENST00000542460 GANABQ14697 944 aaKnown RBP15.58■□□□□ 0.08
LIG1-204ENST00000542460 DUSP7Q16829 419 aa15.58■□□□□ 0.08
LIG1-204ENST00000542460 NDUFAF6Q330K2 333 aa15.58■□□□□ 0.08
LIG1-204ENST00000542460 PGM2L1Q6PCE3 622 aa15.58■□□□□ 0.08
LIG1-204ENST00000542460 YTHDF3Q7Z739 585 aaKnown RBP15.58■□□□□ 0.08
LIG1-204ENST00000542460 ZNF440Q8IYI8 595 aa15.58■□□□□ 0.08
LIG1-204ENST00000542460 ZNF843Q8N446 348 aa15.58■□□□□ 0.08
LIG1-204ENST00000542460 TMCO5AQ8N6Q1 288 aa15.58■□□□□ 0.08
LIG1-204ENST00000542460 OR5W2Q8NH69 310 aa15.58■□□□□ 0.08
LIG1-204ENST00000542460 FAR1Q8WVX9 515 aa15.58■□□□□ 0.08
LIG1-204ENST00000542460 SLC35B4Q969S0 331 aa15.58■□□□□ 0.08
LIG1-204ENST00000542460 FAM162AQ96A26 154 aa15.58■□□□□ 0.08
LIG1-204ENST00000542460 CLPTM1LQ96KA5 538 aa15.58■□□□□ 0.08
LIG1-204ENST00000542460 PCDHAC1Q9H158 963 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms