RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 GUSBP08236 651 aa8.78□□□□□ -1
YBX3-212ENST00000542002 NUDT7P0C024 238 aa8.78□□□□□ -1
YBX3-212ENST00000542002 TFPTP0C1Z6 253 aa8.78□□□□□ -1
YBX3-212ENST00000542002 ETFAP13804 333 aa8.78□□□□□ -1
YBX3-212ENST00000542002 PRF1P14222 555 aa8.78□□□□□ -1
YBX3-212ENST00000542002 HPGDP15428 266 aa8.78□□□□□ -1
YBX3-212ENST00000542002 NCF2P19878 526 aaPredicted RBP8.78□□□□□ -1
YBX3-212ENST00000542002 MSX1P28360 303 aa8.78□□□□□ -1
YBX3-212ENST00000542002 CHRNB4P30926 498 aa8.78□□□□□ -1
YBX3-212ENST00000542002 PTGER4P35408 488 aa8.78□□□□□ -1
YBX3-212ENST00000542002 TIMP3P35625 211 aa8.78□□□□□ -1
YBX3-212ENST00000542002 ATP4BP51164 291 aa8.78□□□□□ -1
YBX3-212ENST00000542002 AGFG1P52594 562 aaKnown RBP8.78□□□□□ -1
YBX3-212ENST00000542002 LRRC74AQ0VAA2 488 aa8.78□□□□□ -1
YBX3-212ENST00000542002 FOXF2Q12947 444 aa8.78□□□□□ -1
YBX3-212ENST00000542002 GANABQ14697 944 aaKnown RBP8.78□□□□□ -1
YBX3-212ENST00000542002 BCL2A1Q16548 175 aa8.78□□□□□ -1
YBX3-212ENST00000542002 PLPPR5Q32ZL2 321 aa8.78□□□□□ -1
YBX3-212ENST00000542002 GLYR1Q49A26 553 aaPredicted RBP8.78□□□□□ -1
YBX3-212ENST00000542002 C6orf10Q5SRN2 563 aa8.78□□□□□ -1
YBX3-212ENST00000542002 RAET1LQ5VY80 246 aa8.78□□□□□ -1
YBX3-212ENST00000542002 AAGABQ6PD74 315 aa8.78□□□□□ -1
YBX3-212ENST00000542002 MSANTD1Q6ZTZ1 278 aa8.78□□□□□ -1
YBX3-212ENST00000542002 C16orf62Q7Z3J2 963 aa8.78□□□□□ -1
YBX3-212ENST00000542002 PM20D2Q8IYS1 436 aa8.78□□□□□ -1
YBX3-212ENST00000542002 UBQLNLQ8IYU4 475 aa8.78□□□□□ -1
YBX3-212ENST00000542002 EID3Q8N140 333 aa8.78□□□□□ -1
YBX3-212ENST00000542002 TRIML2Q8N7C3 387 aa8.78□□□□□ -1
YBX3-212ENST00000542002 B4GALNT2Q8NHY0 566 aa8.78□□□□□ -1
YBX3-212ENST00000542002 GPR119Q8TDV5 335 aa8.78□□□□□ -1
YBX3-212ENST00000542002 CA5BP1Q8WTZ4 195 aa8.78□□□□□ -1
YBX3-212ENST00000542002 STON2Q8WXE9 905 aa8.78□□□□□ -1
YBX3-212ENST00000542002 SPDL1Q96EA4 605 aa8.78□□□□□ -1
YBX3-212ENST00000542002 UCN2Q96RP3 112 aa8.78□□□□□ -1
YBX3-212ENST00000542002 TMEM120AQ9BXJ8 343 aa8.78□□□□□ -1
YBX3-212ENST00000542002 SLC38A1Q9H2H9 487 aa8.78□□□□□ -1
YBX3-212ENST00000542002 PTGES2Q9H7Z7 377 aa8.78□□□□□ -1
YBX3-212ENST00000542002 CALHM2Q9HA72 323 aa8.78□□□□□ -1
YBX3-212ENST00000542002 NPDC1Q9NQX5 325 aaPredicted RBP8.78□□□□□ -1
YBX3-212ENST00000542002 EXD2Q9NVH0 621 aa8.78□□□□□ -1
YBX3-212ENST00000542002 DNAJC13O75165 2243 aa8.78□□□□□ -1
YBX3-212ENST00000542002 CRYBG3Q68DQ2 2970 aa8.78□□□□□ -1
YBX3-212ENST00000542002 NCOA6Q14686 2063 aaPredicted RBP8.77□□□□□ -1
YBX3-212ENST00000542002 DIDO1Q9BTC0 2240 aaKnown RBP8.77□□□□□ -1.01
YBX3-212ENST00000542002 PCNX3Q9H6A9 2034 aa8.77□□□□□ -1.01
YBX3-212ENST00000542002 A0A096LPI6 279 aa8.77□□□□□ -1.01
YBX3-212ENST00000542002 TRBV5-3A0A0A0MS03 114 aa8.77□□□□□ -1.01
YBX3-212ENST00000542002 MBD3L4A6NDZ8 208 aaPredicted RBP8.77□□□□□ -1.01
YBX3-212ENST00000542002 MBD3L3A6NE82 208 aaPredicted RBP8.77□□□□□ -1.01
YBX3-212ENST00000542002 MBD3L5A6NJ08 208 aaPredicted RBP8.77□□□□□ -1.01
YBX3-212ENST00000542002 FAM90A27PA6NNH2 459 aa8.77□□□□□ -1.01
YBX3-212ENST00000542002 CLCA1A8K7I4 914 aa8.77□□□□□ -1.01
YBX3-212ENST00000542002 H3BML4 177 aa8.77□□□□□ -1.01
YBX3-212ENST00000542002 NR5A2O00482 541 aa8.77□□□□□ -1.01
YBX3-212ENST00000542002 KIAA0513O60268 411 aa8.77□□□□□ -1.01
YBX3-212ENST00000542002 DNAJA2O60884 412 aa8.77□□□□□ -1.01
YBX3-212ENST00000542002 KRT75O95678 551 aa8.77□□□□□ -1.01
YBX3-212ENST00000542002 AK1P00568 194 aa8.77□□□□□ -1.01
YBX3-212ENST00000542002 SHC1P29353 583 aa8.77□□□□□ -1.01
YBX3-212ENST00000542002 PGM1P36871 562 aa8.77□□□□□ -1.01
YBX3-212ENST00000542002 MDH1P40925 334 aaKnown RBP8.77□□□□□ -1.01
YBX3-212ENST00000542002 KHKP50053 298 aa8.77□□□□□ -1.01
YBX3-212ENST00000542002 ZNF136P52737 540 aa8.77□□□□□ -1.01
YBX3-212ENST00000542002 STX1BP61266 288 aa8.77□□□□□ -1.01
YBX3-212ENST00000542002 SKP2Q13309 424 aa8.77□□□□□ -1.01
YBX3-212ENST00000542002 SQLEQ14534 574 aa8.77□□□□□ -1.01
YBX3-212ENST00000542002 GPAT3Q53EU6 434 aa8.77□□□□□ -1.01
YBX3-212ENST00000542002 LRIF1Q5T3J3 769 aa8.77□□□□□ -1.01
YBX3-212ENST00000542002 RIPPLY2Q5TAB7 128 aa8.77□□□□□ -1.01
YBX3-212ENST00000542002 ENPP6Q6UWR7 440 aa8.77□□□□□ -1.01
YBX3-212ENST00000542002 DLEU7Q6UYE1 221 aa8.77□□□□□ -1.01
YBX3-212ENST00000542002 MTERF4Q7Z6M4 381 aaKnown RBP8.77□□□□□ -1.01
YBX3-212ENST00000542002 GGNQ86UU5 652 aa8.77□□□□□ -1.01
YBX3-212ENST00000542002 RETREG3Q86VR2 466 aa8.77□□□□□ -1.01
YBX3-212ENST00000542002 MISPQ8IVT2 679 aa8.77□□□□□ -1.01
YBX3-212ENST00000542002 GTPBP8Q8N3Z3 284 aaPredicted RBP8.77□□□□□ -1.01
YBX3-212ENST00000542002 ZNF614Q8N883 585 aa8.77□□□□□ -1.01
YBX3-212ENST00000542002 ZNF527Q8NB42 609 aa8.77□□□□□ -1.01
YBX3-212ENST00000542002 ACBD4Q8NC06 268 aa8.77□□□□□ -1.01
YBX3-212ENST00000542002 RELL2Q8NC24 303 aaPredicted RBP8.77□□□□□ -1.01
YBX3-212ENST00000542002 MBD3L2Q8NHZ7 208 aaPredicted RBP8.77□□□□□ -1.01
YBX3-212ENST00000542002 SLC38A5Q8WUX1 472 aa8.77□□□□□ -1.01
YBX3-212ENST00000542002 ASB5Q8WWX0 329 aa8.77□□□□□ -1.01
YBX3-212ENST00000542002 FIG4Q92562 907 aa8.77□□□□□ -1.01
YBX3-212ENST00000542002 ZNF845Q96IR2 970 aaPredicted RBP8.77□□□□□ -1.01
YBX3-212ENST00000542002 RNF145Q96MT1 663 aa8.77□□□□□ -1.01
YBX3-212ENST00000542002 ZNF317Q96PQ6 595 aaPredicted RBP8.77□□□□□ -1.01
YBX3-212ENST00000542002 TRNT1Q96Q11 434 aaKnown RBP8.77□□□□□ -1.01
YBX3-212ENST00000542002 PIGQQ9BRB3 760 aa8.77□□□□□ -1.01
YBX3-212ENST00000542002 IKZF5Q9H5V7 419 aa8.77□□□□□ -1.01
YBX3-212ENST00000542002 CCDC134Q9H6E4 229 aa8.77□□□□□ -1.01
YBX3-212ENST00000542002 RMND5AQ9H871 391 aa8.77□□□□□ -1.01
YBX3-212ENST00000542002 MED4Q9NPJ6 270 aa8.77□□□□□ -1.01
YBX3-212ENST00000542002 COQ3Q9NZJ6 369 aa8.77□□□□□ -1.01
YBX3-212ENST00000542002 VAPAQ9P0L0 249 aa8.77□□□□□ -1.01
YBX3-212ENST00000542002 CLCF1Q9UBD9 225 aa8.77□□□□□ -1.01
YBX3-212ENST00000542002 L3MBTL1Q9Y468 752 aa8.77□□□□□ -1.01
YBX3-212ENST00000542002 WDR45Q9Y484 360 aa8.77□□□□□ -1.01
YBX3-212ENST00000542002 KIAA1549Q9HCM3 1950 aa8.77□□□□□ -1.01
YBX3-212ENST00000542002 FREM3P0C091 2139 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms