RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 DHRSXQ8N5I4 330 aa25.53■■□□□ 1.68
CCM2-218ENST00000541586 ZNF614Q8N883 585 aa25.53■■□□□ 1.68
CCM2-218ENST00000541586 ATG16L2Q8NAA4 619 aa25.53■■□□□ 1.68
CCM2-218ENST00000541586 PIK3C3Q8NEB9 887 aa25.53■■□□□ 1.68
CCM2-218ENST00000541586 THAP3Q8WTV1 239 aaPredicted RBP25.53■■□□□ 1.68
CCM2-218ENST00000541586 CYGBQ8WWM9 190 aa25.53■■□□□ 1.68
CCM2-218ENST00000541586 CNBD2Q96M20 576 aa25.53■■□□□ 1.68
CCM2-218ENST00000541586 ALPK1Q96QP1 1244 aa25.53■■□□□ 1.68
CCM2-218ENST00000541586 TOR3AQ9H497 397 aa25.53■■□□□ 1.68
CCM2-218ENST00000541586 CTPS2Q9NRF8 586 aa25.53■■□□□ 1.68
CCM2-218ENST00000541586 ZZEF1O43149 2961 aa25.53■■□□□ 1.68
CCM2-218ENST00000541586 MGAQ8IWI9 3026 aa25.52■■□□□ 1.68
CCM2-218ENST00000541586 ITGAMP11215 1152 aa25.52■■□□□ 1.68
CCM2-218ENST00000541586 IGFBP5P24593 272 aa25.52■■□□□ 1.68
CCM2-218ENST00000541586 NR0B1P51843 470 aaKnown RBP25.52■■□□□ 1.68
CCM2-218ENST00000541586 RNF4P78317 190 aa25.52■■□□□ 1.68
CCM2-218ENST00000541586 OR10G2Q8NGC3 310 aa25.52■■□□□ 1.68
CCM2-218ENST00000541586 OR4C3Q8NH37 302 aa25.52■■□□□ 1.68
CCM2-218ENST00000541586 VMP1Q96GC9 406 aa25.52■■□□□ 1.68
CCM2-218ENST00000541586 FNDC11Q9BVV2 318 aa25.52■■□□□ 1.68
CCM2-218ENST00000541586 ARMC7Q9H6L4 198 aa25.52■■□□□ 1.68
CCM2-218ENST00000541586 KIF17Q9P2E2 1029 aa25.52■■□□□ 1.68
CCM2-218ENST00000541586 MED13Q9UHV7 2174 aa25.52■■□□□ 1.68
CCM2-218ENST00000541586 TRBV4-1A0A0J9YWV2 114 aa25.51■■□□□ 1.68
CCM2-218ENST00000541586 TRBV11-1A0A0K0K1C0 115 aa25.51■■□□□ 1.68
CCM2-218ENST00000541586 TO15178 435 aa25.51■■□□□ 1.68
CCM2-218ENST00000541586 BCAS1O75363 584 aaPredicted RBP25.51■■□□□ 1.68
CCM2-218ENST00000541586 ZNF136P52737 540 aa25.51■■□□□ 1.68
CCM2-218ENST00000541586 PSMD4P55036 377 aaKnown RBP25.51■■□□□ 1.68
CCM2-218ENST00000541586 SMIM11AP58511 58 aa25.51■■□□□ 1.68
CCM2-218ENST00000541586 PLAURQ03405 335 aa25.51■■□□□ 1.68
CCM2-218ENST00000541586 ST3GAL2Q16842 350 aa25.51■■□□□ 1.68
CCM2-218ENST00000541586 FGD3Q5JSP0 725 aa25.51■■□□□ 1.68
CCM2-218ENST00000541586 HSDL2Q6YN16 418 aa25.51■■□□□ 1.68
CCM2-218ENST00000541586 CHERPQ8IWX8 916 aaKnown RBP25.51■■□□□ 1.68
CCM2-218ENST00000541586 C17orf47Q8NEP4 570 aa25.51■■□□□ 1.68
CCM2-218ENST00000541586 ANKRD60Q9BZ19 345 aa25.51■■□□□ 1.68
CCM2-218ENST00000541586 MMP25Q9NPA2 562 aa25.51■■□□□ 1.68
CCM2-218ENST00000541586 PTPRQQ9UMZ3 2332 aa25.51■■□□□ 1.67
CCM2-218ENST00000541586 MITFO75030 526 aaPredicted RBP25.51■■□□□ 1.67
CCM2-218ENST00000541586 SERPINA7P05543 415 aa25.51■■□□□ 1.67
CCM2-218ENST00000541586 ELAVL4P26378 380 aaKnown RBP25.51■■□□□ 1.67
CCM2-218ENST00000541586 CAPGP40121 348 aa25.51■■□□□ 1.67
CCM2-218ENST00000541586 PDK3Q15120 406 aa25.51■■□□□ 1.67
CCM2-218ENST00000541586 PRR22Q8IZ63 422 aa25.51■■□□□ 1.67
CCM2-218ENST00000541586 GALNT16Q8N428 558 aa25.51■■□□□ 1.67
CCM2-218ENST00000541586 SLC5A8Q8N695 610 aa25.51■■□□□ 1.67
CCM2-218ENST00000541586 ELP5Q8TE02 316 aa25.51■■□□□ 1.67
CCM2-218ENST00000541586 MBOAT4Q96T53 435 aa25.51■■□□□ 1.67
CCM2-218ENST00000541586 FEVQ99581 238 aa25.51■■□□□ 1.67
CCM2-218ENST00000541586 DEFB126Q9BYW3 111 aa25.51■■□□□ 1.67
CCM2-218ENST00000541586 LIN28AQ9H9Z2 209 aaKnown RBP25.51■■□□□ 1.67
CCM2-218ENST00000541586 MRTO4Q9UKD2 239 aaKnown RBP25.51■■□□□ 1.67
CCM2-218ENST00000541586 ORC6Q9Y5N6 252 aa25.51■■□□□ 1.67
CCM2-218ENST00000541586 A0A1W2PRQ8 180 aa25.5■■□□□ 1.67
CCM2-218ENST00000541586 AP3D1O14617 1153 aa25.5■■□□□ 1.67
CCM2-218ENST00000541586 CCNB2O95067 398 aa25.5■■□□□ 1.67
CCM2-218ENST00000541586 RAD23AP54725 363 aa25.5■■□□□ 1.67
CCM2-218ENST00000541586 TAS2R41P59536 307 aa25.5■■□□□ 1.67
CCM2-218ENST00000541586 ADARB1P78563 741 aaKnown RBP25.5■■□□□ 1.67
CCM2-218ENST00000541586 DGCR6Q14129 220 aa25.5■■□□□ 1.67
CCM2-218ENST00000541586 RFX4Q33E94 735 aa25.5■■□□□ 1.67
CCM2-218ENST00000541586 GALNT5Q7Z7M9 940 aa25.5■■□□□ 1.67
CCM2-218ENST00000541586 SIRT6Q8N6T7 355 aa25.5■■□□□ 1.67
CCM2-218ENST00000541586 OR9Q2Q8NGE9 314 aa25.5■■□□□ 1.67
CCM2-218ENST00000541586 BRIX1Q8TDN6 353 aaKnown RBP25.5■■□□□ 1.67
CCM2-218ENST00000541586 DIO2Q92813 273 aa25.5■■□□□ 1.67
CCM2-218ENST00000541586 HSPBAP1Q96EW2 488 aa25.5■■□□□ 1.67
CCM2-218ENST00000541586 MCHR1Q99705 422 aa25.5■■□□□ 1.67
CCM2-218ENST00000541586 ST6GALNAC1Q9NSC7 600 aaPredicted RBP25.5■■□□□ 1.67
CCM2-218ENST00000541586 MAN2C1Q9NTJ4 1040 aa25.5■■□□□ 1.67
CCM2-218ENST00000541586 UBAP1Q9NZ09 502 aa25.5■■□□□ 1.67
CCM2-218ENST00000541586 NTNG1Q9Y2I2 539 aa25.5■■□□□ 1.67
CCM2-218ENST00000541586 CPSF4LA6NMK7 179 aaKnown RBP25.49■■□□□ 1.67
CCM2-218ENST00000541586 GNAO1P09471 354 aa25.49■■□□□ 1.67
CCM2-218ENST00000541586 GKN3PP0CG01 181 aa25.49■■□□□ 1.67
CCM2-218ENST00000541586 PRG2P13727 222 aa25.49■■□□□ 1.67
CCM2-218ENST00000541586 FGFBP1Q14512 234 aa25.49■■□□□ 1.67
CCM2-218ENST00000541586 ENTPD8Q5MY95 495 aa25.49■■□□□ 1.67
CCM2-218ENST00000541586 OFCC1Q8IZS5 231 aa25.49■■□□□ 1.67
CCM2-218ENST00000541586 NR4A3Q92570 626 aa25.49■■□□□ 1.67
CCM2-218ENST00000541586 CNOT9Q92600 299 aaKnown RBP25.49■■□□□ 1.67
CCM2-218ENST00000541586 EXTL1Q92935 676 aa25.49■■□□□ 1.67
CCM2-218ENST00000541586 PSD2Q9BQI7 771 aa25.49■■□□□ 1.67
CCM2-218ENST00000541586 FUZQ9BT04 418 aa25.49■■□□□ 1.67
CCM2-218ENST00000541586 FLRT3Q9NZU0 649 aa25.49■■□□□ 1.67
CCM2-218ENST00000541586 TMCC3Q9ULS5 477 aa25.49■■□□□ 1.67
CCM2-218ENST00000541586 EPS8Q12929 822 aa25.49■■□□□ 1.67
CCM2-218ENST00000541586 SEC23BQ15437 767 aa25.49■■□□□ 1.67
CCM2-218ENST00000541586 DCST1Q5T197 706 aa25.49■■□□□ 1.67
CCM2-218ENST00000541586 FCRLBQ6BAA4 426 aa25.49■■□□□ 1.67
CCM2-218ENST00000541586 BORAQ6PGQ7 559 aa25.49■■□□□ 1.67
CCM2-218ENST00000541586 RANBP3LQ86VV4 465 aaPredicted RBP25.49■■□□□ 1.67
CCM2-218ENST00000541586 SLC7A13Q8TCU3 470 aa25.49■■□□□ 1.67
CCM2-218ENST00000541586 NR1H4Q96RI1 486 aaPredicted RBP25.49■■□□□ 1.67
CCM2-218ENST00000541586 ADOQ96SZ5 270 aa25.49■■□□□ 1.67
CCM2-218ENST00000541586 HOXD1Q9GZZ0 328 aa25.49■■□□□ 1.67
CCM2-218ENST00000541586 LHPPQ9H008 270 aa25.49■■□□□ 1.67
CCM2-218ENST00000541586 KRT84Q9NSB2 600 aa25.49■■□□□ 1.67
CCM2-218ENST00000541586 PCDHGB5Q9Y5G0 923 aa25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms