RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 MGAQ8IWI9 3026 aa9.71□□□□□ -0.85
CHFR-219ENST00000541341 PRAMEF33A0A0G2JMD5 474 aa9.71□□□□□ -0.86
CHFR-219ENST00000541341 A0A0G2JPF8 293 aa9.71□□□□□ -0.86
CHFR-219ENST00000541341 HNRNPCL2B2RXH8 293 aa9.71□□□□□ -0.86
CHFR-219ENST00000541341 HNRNPCL3B7ZW38 293 aa9.71□□□□□ -0.86
CHFR-219ENST00000541341 H3BM21 787 aa9.71□□□□□ -0.86
CHFR-219ENST00000541341 CTDSPLO15194 276 aa9.71□□□□□ -0.86
CHFR-219ENST00000541341 SPINT1O43278 529 aa9.71□□□□□ -0.86
CHFR-219ENST00000541341 PLRG1O43660 514 aaKnown RBP9.71□□□□□ -0.86
CHFR-219ENST00000541341 TLX2O43763 284 aaPredicted RBP9.71□□□□□ -0.86
CHFR-219ENST00000541341 PRAMEF10O60809 474 aa9.71□□□□□ -0.86
CHFR-219ENST00000541341 C1QL1O75973 258 aa9.71□□□□□ -0.86
CHFR-219ENST00000541341 C6orf47O95873 294 aa9.71□□□□□ -0.86
CHFR-219ENST00000541341 AGR2O95994 175 aa9.71□□□□□ -0.86
CHFR-219ENST00000541341 LALBAP00709 142 aa9.71□□□□□ -0.86
CHFR-219ENST00000541341 ALPIP09923 528 aa9.71□□□□□ -0.86
CHFR-219ENST00000541341 NUDT7P0C024 238 aa9.71□□□□□ -0.86
CHFR-219ENST00000541341 FAM157BP0CG42 384 aa9.71□□□□□ -0.86
CHFR-219ENST00000541341 HNRNPCL4P0DMR1 293 aa9.71□□□□□ -0.86
CHFR-219ENST00000541341 SAGP10523 405 aaPredicted RBP9.71□□□□□ -0.86
CHFR-219ENST00000541341 ADRB3P13945 408 aa9.71□□□□□ -0.86
CHFR-219ENST00000541341 DRD2P14416 443 aa9.71□□□□□ -0.86
CHFR-219ENST00000541341 POU2F1P14859 743 aa9.71□□□□□ -0.86
CHFR-219ENST00000541341 TIMP2P16035 220 aa9.71□□□□□ -0.86
CHFR-219ENST00000541341 UQCRC1P31930 480 aa9.71□□□□□ -0.86
CHFR-219ENST00000541341 SOAT1P35610 550 aa9.71□□□□□ -0.86
CHFR-219ENST00000541341 BDKRB1P46663 353 aa9.71□□□□□ -0.86
CHFR-219ENST00000541341 OR1E2P47887 323 aa9.71□□□□□ -0.86
CHFR-219ENST00000541341 ARRB1P49407 418 aaPredicted RBP9.71□□□□□ -0.86
CHFR-219ENST00000541341 KHKP50053 298 aa9.71□□□□□ -0.86
CHFR-219ENST00000541341 CRISP3P54108 245 aa9.71□□□□□ -0.86
CHFR-219ENST00000541341 NXPH1P58417 271 aa9.71□□□□□ -0.86
CHFR-219ENST00000541341 CXADRP78310 365 aa9.71□□□□□ -0.86
CHFR-219ENST00000541341 RAE1P78406 368 aaKnown RBP9.71□□□□□ -0.86
CHFR-219ENST00000541341 TSPAN31Q12999 210 aa9.71□□□□□ -0.86
CHFR-219ENST00000541341 GAB1Q13480 694 aa9.71□□□□□ -0.86
CHFR-219ENST00000541341 GINS1Q14691 196 aa9.71□□□□□ -0.86
CHFR-219ENST00000541341 SLC5A12Q1EHB4 618 aa9.71□□□□□ -0.86
CHFR-219ENST00000541341 ZNF542PQ5EBM4 170 aa9.71□□□□□ -0.86
CHFR-219ENST00000541341 ZNF311Q5JNZ3 666 aa9.71□□□□□ -0.86
CHFR-219ENST00000541341 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.71□□□□□ -0.86
CHFR-219ENST00000541341 FAAH2Q6GMR7 532 aa9.71□□□□□ -0.86
CHFR-219ENST00000541341 ADNP2Q6IQ32 1131 aa9.71□□□□□ -0.86
CHFR-219ENST00000541341 CRTC1Q6UUV9 634 aa9.71□□□□□ -0.86
CHFR-219ENST00000541341 Q6ZPB1 254 aaPredicted RBP9.71□□□□□ -0.86
CHFR-219ENST00000541341 SLCO4C1Q6ZQN7 724 aa9.71□□□□□ -0.86
CHFR-219ENST00000541341 CXXC5Q7LFL8 322 aaKnown RBP9.71□□□□□ -0.86
CHFR-219ENST00000541341 FAM20CQ8IXL6 584 aa9.71□□□□□ -0.86
CHFR-219ENST00000541341 MS4A15Q8N5U1 240 aa9.71□□□□□ -0.86
CHFR-219ENST00000541341 OR56B4Q8NH76 319 aa9.71□□□□□ -0.86
CHFR-219ENST00000541341 VANGL1Q8TAA9 524 aaPredicted RBP9.71□□□□□ -0.86
CHFR-219ENST00000541341 HAVCR2Q8TDQ0 301 aa9.71□□□□□ -0.86
CHFR-219ENST00000541341 NUDT8Q8WV74 236 aa9.71□□□□□ -0.86
CHFR-219ENST00000541341 SLC39A7Q92504 469 aa9.71□□□□□ -0.86
CHFR-219ENST00000541341 MAL2Q969L2 176 aa9.71□□□□□ -0.86
CHFR-219ENST00000541341 EID2BQ96D98 161 aa9.71□□□□□ -0.86
CHFR-219ENST00000541341 RNFT2Q96EX2 444 aa9.71□□□□□ -0.86
CHFR-219ENST00000541341 SCMH1Q96GD3 660 aa9.71□□□□□ -0.86
CHFR-219ENST00000541341 LRR1Q96L50 414 aa9.71□□□□□ -0.86
CHFR-219ENST00000541341 PRRC1Q96M27 445 aa9.71□□□□□ -0.86
CHFR-219ENST00000541341 SORCS2Q96PQ0 1159 aa9.71□□□□□ -0.86
CHFR-219ENST00000541341 ATF6BQ99941 703 aa9.71□□□□□ -0.86
CHFR-219ENST00000541341 SLC6A15Q9H2J7 730 aa9.71□□□□□ -0.86
CHFR-219ENST00000541341 PLSCR3Q9NRY6 295 aa9.71□□□□□ -0.86
CHFR-219ENST00000541341 NLGN3Q9NZ94 848 aa9.71□□□□□ -0.86
CHFR-219ENST00000541341 DNAJC27Q9NZQ0 273 aa9.71□□□□□ -0.86
CHFR-219ENST00000541341 STOX2Q9P2F5 926 aaPredicted RBP9.71□□□□□ -0.86
CHFR-219ENST00000541341 EXOGQ9Y2C4 368 aaKnown RBP9.71□□□□□ -0.86
CHFR-219ENST00000541341 SF3B6Q9Y3B4 125 aaKnown RBP9.71□□□□□ -0.86
CHFR-219ENST00000541341 CACNG2Q9Y698 323 aa9.71□□□□□ -0.86
CHFR-219ENST00000541341 KNTC1P50748 2209 aa9.71□□□□□ -0.86
CHFR-219ENST00000541341 ASXL3Q9C0F0 2248 aa9.71□□□□□ -0.86
CHFR-219ENST00000541341 LRP4O75096 1905 aa9.7□□□□□ -0.86
CHFR-219ENST00000541341 ISM1B1AKI9 464 aa9.7□□□□□ -0.86
CHFR-219ENST00000541341 AP3D1O14617 1153 aa9.7□□□□□ -0.86
CHFR-219ENST00000541341 SLC31A1O15431 190 aa9.7□□□□□ -0.86
CHFR-219ENST00000541341 SIGLEC6O43699 453 aa9.7□□□□□ -0.86
CHFR-219ENST00000541341 SSX4O60224 188 aa9.7□□□□□ -0.86
CHFR-219ENST00000541341 CSF2P04141 144 aa9.7□□□□□ -0.86
CHFR-219ENST00000541341 SERPIND1P05546 499 aa9.7□□□□□ -0.86
CHFR-219ENST00000541341 RRASP10301 218 aa9.7□□□□□ -0.86
CHFR-219ENST00000541341 NPR2P20594 1047 aa9.7□□□□□ -0.86
CHFR-219ENST00000541341 DDCP20711 480 aa9.7□□□□□ -0.86
CHFR-219ENST00000541341 PAICSP22234 425 aaKnown RBP9.7□□□□□ -0.86
CHFR-219ENST00000541341 AHCYP23526 432 aa9.7□□□□□ -0.86
CHFR-219ENST00000541341 ATP6V1E1P36543 226 aa9.7□□□□□ -0.86
CHFR-219ENST00000541341 ETV3P41162 512 aa9.7□□□□□ -0.86
CHFR-219ENST00000541341 MANFP55145 182 aaKnown RBP9.7□□□□□ -0.86
CHFR-219ENST00000541341 TAS2R38P59533 333 aa9.7□□□□□ -0.86
CHFR-219ENST00000541341 EFNB1P98172 346 aa9.7□□□□□ -0.86
CHFR-219ENST00000541341 INSM1Q01101 510 aaPredicted RBP9.7□□□□□ -0.86
CHFR-219ENST00000541341 MXD1Q05195 221 aa9.7□□□□□ -0.86
CHFR-219ENST00000541341 ST3GAL3Q11203 375 aa9.7□□□□□ -0.86
CHFR-219ENST00000541341 POU4F2Q12837 409 aa9.7□□□□□ -0.86
CHFR-219ENST00000541341 MAP4K2Q12851 820 aa9.7□□□□□ -0.86
CHFR-219ENST00000541341 NAE1Q13564 534 aa9.7□□□□□ -0.86
CHFR-219ENST00000541341 TRAM2Q15035 370 aa9.7□□□□□ -0.86
CHFR-219ENST00000541341 AGERQ15109 404 aa9.7□□□□□ -0.86
CHFR-219ENST00000541341 SPDYE7PQ495Y7 208 aa9.7□□□□□ -0.86
CHFR-219ENST00000541341 TMEM52BQ4KMG9 183 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms