RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 CD8AP01732 235 aa23.8■■□□□ 1.4
CHFR-218ENST00000540963 LINGO3P0C6S8 592 aa23.8■■□□□ 1.4
CHFR-218ENST00000540963 FAM153BP0C7A2 387 aa23.8■■□□□ 1.4
CHFR-218ENST00000540963 MANFP55145 182 aaKnown RBP23.8■■□□□ 1.4
CHFR-218ENST00000540963 FAM153CQ494X1 144 aa23.8■■□□□ 1.4
CHFR-218ENST00000540963 TIFABQ6ZNK6 161 aa23.8■■□□□ 1.4
CHFR-218ENST00000540963 ZC3HAV1Q7Z2W4 902 aaKnown RBP23.8■■□□□ 1.4
CHFR-218ENST00000540963 NUFIP2Q7Z417 695 aaKnown RBP23.8■■□□□ 1.4
CHFR-218ENST00000540963 TUSC5Q8IXB3 177 aa23.8■■□□□ 1.4
CHFR-218ENST00000540963 SLC43A2Q8N370 569 aa23.8■■□□□ 1.4
CHFR-218ENST00000540963 BANPQ8N9N5 519 aa23.8■■□□□ 1.4
CHFR-218ENST00000540963 TXLNGYQ9BZA5 131 aa23.8■■□□□ 1.4
CHFR-218ENST00000540963 CISD1Q9NZ45 108 aaKnown RBP23.8■■□□□ 1.4
CHFR-218ENST00000540963 TMEM216Q9P0N5 145 aa23.8■■□□□ 1.4
CHFR-218ENST00000540963 DPRXA6NFQ7 191 aa23.79■■□□□ 1.4
CHFR-218ENST00000540963 GJE1A6NN92 205 aa23.79■■□□□ 1.4
CHFR-218ENST00000540963 PRKD3O94806 890 aa23.79■■□□□ 1.4
CHFR-218ENST00000540963 HSPA4LO95757 839 aa23.79■■□□□ 1.4
CHFR-218ENST00000540963 ADAP00813 363 aa23.79■■□□□ 1.4
CHFR-218ENST00000540963 PYGBP11216 843 aa23.79■■□□□ 1.4
CHFR-218ENST00000540963 HPGDP15428 266 aa23.79■■□□□ 1.4
CHFR-218ENST00000540963 DSCR9P59020 149 aa23.79■■□□□ 1.4
CHFR-218ENST00000540963 TSC22D1Q15714 1073 aa23.79■■□□□ 1.4
CHFR-218ENST00000540963 IMPG1Q17R60 797 aa23.79■■□□□ 1.4
CHFR-218ENST00000540963 C6orf52Q5T4I8 152 aa23.79■■□□□ 1.4
CHFR-218ENST00000540963 TRIM46Q7Z4K8 759 aa23.79■■□□□ 1.4
CHFR-218ENST00000540963 B4GALNT2Q8NHY0 566 aa23.79■■□□□ 1.4
CHFR-218ENST00000540963 KCNA7Q96RP8 456 aa23.79■■□□□ 1.4
CHFR-218ENST00000540963 EQTNQ9NQ60 294 aa23.79■■□□□ 1.4
CHFR-218ENST00000540963 H3BQF6 201 aa23.78■■□□□ 1.4
CHFR-218ENST00000540963 NDUFS7O75251 213 aa23.78■■□□□ 1.4
CHFR-218ENST00000540963 RSL1D1O76021 490 aaKnown RBP23.78■■□□□ 1.4
CHFR-218ENST00000540963 KCNK2O95069 426 aa23.78■■□□□ 1.4
CHFR-218ENST00000540963 YES1P07947 543 aa23.78■■□□□ 1.4
CHFR-218ENST00000540963 ZCCHC12Q6PEW1 402 aa23.78■■□□□ 1.4
CHFR-218ENST00000540963 Q6ZT83 130 aa23.78■■□□□ 1.4
CHFR-218ENST00000540963 ZNF551Q7Z340 670 aaPredicted RBP23.78■■□□□ 1.4
CHFR-218ENST00000540963 GATSQ8NAP1 163 aa23.78■■□□□ 1.4
CHFR-218ENST00000540963 OR10H5Q8NGA6 315 aa23.78■■□□□ 1.4
CHFR-218ENST00000540963 RADILQ96JH8 1075 aa23.78■■□□□ 1.4
CHFR-218ENST00000540963 GDF2Q9UK05 429 aaPredicted RBP23.78■■□□□ 1.4
CHFR-218ENST00000540963 POLR3HQ9Y535 204 aaPredicted RBP23.78■■□□□ 1.4
CHFR-218ENST00000540963 A0A096LNT2 108 aa23.77■■□□□ 1.4
CHFR-218ENST00000540963 KIF2AO00139 706 aaPredicted RBP23.77■■□□□ 1.4
CHFR-218ENST00000540963 SCDO00767 359 aa23.77■■□□□ 1.4
CHFR-218ENST00000540963 C8BP07358 591 aa23.77■■□□□ 1.4
CHFR-218ENST00000540963 ABHD2P08910 425 aa23.77■■□□□ 1.4
CHFR-218ENST00000540963 SFTPDP35247 375 aa23.77■■□□□ 1.4
CHFR-218ENST00000540963 THBS2P35442 1172 aa23.77■■□□□ 1.4
CHFR-218ENST00000540963 SERPINB4P48594 390 aa23.77■■□□□ 1.4
CHFR-218ENST00000540963 NAA20P61599 178 aa23.77■■□□□ 1.4
CHFR-218ENST00000540963 HSPB3Q12988 150 aa23.77■■□□□ 1.4
CHFR-218ENST00000540963 AGAP6Q5VW22 663 aa23.77■■□□□ 1.4
CHFR-218ENST00000540963 NOXRED1Q6NXP6 359 aa23.77■■□□□ 1.4
CHFR-218ENST00000540963 FCRLAQ7L513 359 aa23.77■■□□□ 1.4
CHFR-218ENST00000540963 BHLHA15Q7RTS1 189 aaPredicted RBP23.77■■□□□ 1.4
CHFR-218ENST00000540963 ZNF619Q8N2I2 560 aa23.77■■□□□ 1.4
CHFR-218ENST00000540963 ZFP28Q8NHY6 868 aa23.77■■□□□ 1.4
CHFR-218ENST00000540963 ADAD1Q96M93 576 aaKnown RBP23.77■■□□□ 1.4
CHFR-218ENST00000540963 SRXN1Q9BYN0 137 aa23.77■■□□□ 1.4
CHFR-218ENST00000540963 GIMAP1-GIMAP5A0A087WTJ2 511 aa23.76■■□□□ 1.39
CHFR-218ENST00000540963 SHISA9B4DS77 424 aa23.76■■□□□ 1.39
CHFR-218ENST00000540963 PDPK1O15530 556 aa23.76■■□□□ 1.39
CHFR-218ENST00000540963 RIPK2O43353 540 aa23.76■■□□□ 1.39
CHFR-218ENST00000540963 GPC1P35052 558 aa23.76■■□□□ 1.39
CHFR-218ENST00000540963 MTERF4Q7Z6M4 381 aaKnown RBP23.76■■□□□ 1.39
CHFR-218ENST00000540963 ATG4DQ86TL0 474 aaPredicted RBP23.76■■□□□ 1.39
CHFR-218ENST00000540963 CEP112Q8N8E3 955 aa23.76■■□□□ 1.39
CHFR-218ENST00000540963 NUP43Q8NFH3 380 aa23.76■■□□□ 1.39
CHFR-218ENST00000540963 MZB1Q8WU39 189 aa23.76■■□□□ 1.39
CHFR-218ENST00000540963 GIMAP5Q96F15 307 aa23.76■■□□□ 1.39
CHFR-218ENST00000540963 SH3YL1Q96HL8 342 aaPredicted RBP23.76■■□□□ 1.39
CHFR-218ENST00000540963 MS4A4EQ96PG1 132 aa23.76■■□□□ 1.39
CHFR-218ENST00000540963 TNFRSF13CQ96RJ3 184 aa23.76■■□□□ 1.39
CHFR-218ENST00000540963 GSTO2Q9H4Y5 243 aa23.76■■□□□ 1.39
CHFR-218ENST00000540963 BCO1Q9HAY6 547 aa23.76■■□□□ 1.39
CHFR-218ENST00000540963 MID1IP1Q9NPA3 183 aa23.76■■□□□ 1.39
CHFR-218ENST00000540963 RRAGDQ9NQL2 400 aaPredicted RBP23.76■■□□□ 1.39
CHFR-218ENST00000540963 LPAR3Q9UBY5 353 aa23.76■■□□□ 1.39
CHFR-218ENST00000540963 B3GALT5Q9Y2C3 310 aa23.76■■□□□ 1.39
CHFR-218ENST00000540963 ALPK2Q86TB3 2170 aa23.76■■□□□ 1.39
CHFR-218ENST00000540963 GOLGA8QA0A0J9YX86 632 aa23.75■■□□□ 1.39
CHFR-218ENST00000540963 GOLGA8OA6NCC3 632 aa23.75■■□□□ 1.39
CHFR-218ENST00000540963 ZNF814B7Z6K7 855 aa23.75■■□□□ 1.39
CHFR-218ENST00000540963 GOLGA8NF8WBI6 632 aa23.75■■□□□ 1.39
CHFR-218ENST00000540963 GOLGA8RI6L899 631 aa23.75■■□□□ 1.39
CHFR-218ENST00000540963 SSX4O60224 188 aa23.75■■□□□ 1.39
CHFR-218ENST00000540963 TBX19O60806 448 aa23.75■■□□□ 1.39
CHFR-218ENST00000540963 SHC1P29353 583 aa23.75■■□□□ 1.39
CHFR-218ENST00000540963 VLDLRP98155 873 aa23.75■■□□□ 1.39
CHFR-218ENST00000540963 LOXL1Q08397 574 aaPredicted RBP23.75■■□□□ 1.39
CHFR-218ENST00000540963 PPA1Q15181 289 aa23.75■■□□□ 1.39
CHFR-218ENST00000540963 TMEM249Q2WGJ8 235 aa23.75■■□□□ 1.39
CHFR-218ENST00000540963 P2RY8Q86VZ1 359 aa23.75■■□□□ 1.39
CHFR-218ENST00000540963 SLC16A11Q8NCK7 471 aa23.75■■□□□ 1.39
CHFR-218ENST00000540963 MUCL1Q96DR8 90 aa23.75■■□□□ 1.39
CHFR-218ENST00000540963 KLHL9Q9P2J3 617 aa23.75■■□□□ 1.39
CHFR-218ENST00000540963 ACTL7BQ9Y614 415 aa23.75■■□□□ 1.39
CHFR-218ENST00000540963 GPC6Q9Y625 555 aaPredicted RBP23.75■■□□□ 1.39
CHFR-218ENST00000540963 PLCE1Q9P212 2302 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms