RNA–Protein interactions for RNA: ENST00000540918.2

TTC39C-203, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2 BASIC

Gene TTC39C, Length 4,117 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-203ENST00000540918 CCRL2O00421 344 aa8.89□□□□□ -0.99
TTC39C-203ENST00000540918 HMGN4O00479 90 aa8.89□□□□□ -0.99
TTC39C-203ENST00000540918 TP53I11O14683 189 aa8.89□□□□□ -0.99
TTC39C-203ENST00000540918 ADAP00813 363 aa8.89□□□□□ -0.99
TTC39C-203ENST00000540918 PGCP20142 388 aa8.89□□□□□ -0.99
TTC39C-203ENST00000540918 RFC3P40938 356 aa8.89□□□□□ -0.99
TTC39C-203ENST00000540918 STAT5AP42229 794 aa8.89□□□□□ -0.99
TTC39C-203ENST00000540918 MAD2L1BPQ15013 274 aaPredicted RBP8.89□□□□□ -0.99
TTC39C-203ENST00000540918 KIAA0040Q15053 153 aa8.89□□□□□ -0.99
TTC39C-203ENST00000540918 CWF19L1Q69YN2 538 aaKnown RBP8.89□□□□□ -0.99
TTC39C-203ENST00000540918 TCEAL6Q6IPX3 200 aa8.89□□□□□ -0.99
TTC39C-203ENST00000540918 ZCCHC12Q6PEW1 402 aa8.89□□□□□ -0.99
TTC39C-203ENST00000540918 P4HA3Q7Z4N8 544 aa8.89□□□□□ -0.99
TTC39C-203ENST00000540918 CEACAM19Q7Z692 300 aa8.89□□□□□ -0.99
TTC39C-203ENST00000540918 MARCH3Q86UD3 253 aa8.89□□□□□ -0.99
TTC39C-203ENST00000540918 NEIL3Q8TAT5 605 aa8.89□□□□□ -0.99
TTC39C-203ENST00000540918 TCEAL3Q969E4 200 aa8.89□□□□□ -0.99
TTC39C-203ENST00000540918 OMA1Q96E52 524 aa8.89□□□□□ -0.99
TTC39C-203ENST00000540918 SLC35A4Q96G79 324 aa8.89□□□□□ -0.99
TTC39C-203ENST00000540918 WACQ9BTA9 647 aa8.89□□□□□ -0.99
TTC39C-203ENST00000540918 FN3KQ9H479 309 aa8.89□□□□□ -0.99
TTC39C-203ENST00000540918 MCCC2Q9HCC0 563 aa8.89□□□□□ -0.99
TTC39C-203ENST00000540918 TRIM36Q9NQ86 728 aa8.89□□□□□ -0.99
TTC39C-203ENST00000540918 C2orf42Q9NWW7 574 aa8.89□□□□□ -0.99
TTC39C-203ENST00000540918 ERVK13-1Q9NX77 482 aa8.89□□□□□ -0.99
TTC39C-203ENST00000540918 ABCD2Q9UBJ2 740 aa8.89□□□□□ -0.99
TTC39C-203ENST00000540918 IGHV5-51A0A0C4DH38 117 aa8.89□□□□□ -0.99
TTC39C-203ENST00000540918 RAB36O95755 333 aa8.89□□□□□ -0.99
TTC39C-203ENST00000540918 CD2P06729 351 aa8.89□□□□□ -0.99
TTC39C-203ENST00000540918 UBL4AP11441 157 aa8.89□□□□□ -0.99
TTC39C-203ENST00000540918 RPS27P42677 84 aaKnown RBP8.89□□□□□ -0.99
TTC39C-203ENST00000540918 RORCP51449 518 aa8.89□□□□□ -0.99
TTC39C-203ENST00000540918 RPS6KA3P51812 740 aa8.89□□□□□ -0.99
TTC39C-203ENST00000540918 EMX1Q04741 257 aaPredicted RBP8.89□□□□□ -0.99
TTC39C-203ENST00000540918 QPRTQ15274 297 aa8.89□□□□□ -0.99
TTC39C-203ENST00000540918 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.89□□□□□ -0.99
TTC39C-203ENST00000540918 PRAMEF8Q5VWM4 474 aa8.89□□□□□ -0.99
TTC39C-203ENST00000540918 PRAMEF7Q5VXH5 474 aa8.89□□□□□ -0.99
TTC39C-203ENST00000540918 MFSD12Q6NUT3 480 aa8.89□□□□□ -0.99
TTC39C-203ENST00000540918 ZNF101Q8IZC7 436 aa8.89□□□□□ -0.99
TTC39C-203ENST00000540918 SPARTQ8N0X7 666 aa8.89□□□□□ -0.99
TTC39C-203ENST00000540918 ACBD7Q8N6N7 88 aa8.89□□□□□ -0.99
TTC39C-203ENST00000540918 NPRL2Q8WTW4 380 aa8.89□□□□□ -0.99
TTC39C-203ENST00000540918 TMCO6Q96DC7 493 aa8.89□□□□□ -0.99
TTC39C-203ENST00000540918 PAK1IP1Q9NWT1 392 aaPredicted RBP8.89□□□□□ -0.99
TTC39C-203ENST00000540918 MRPL15Q9P015 296 aaKnown RBP8.89□□□□□ -0.99
TTC39C-203ENST00000540918 IRGMA1A4Y4 181 aa8.89□□□□□ -0.99
TTC39C-203ENST00000540918 ZC3H12DA2A288 527 aaKnown RBP8.89□□□□□ -0.99
TTC39C-203ENST00000540918 VSTM2BA6NLU5 285 aa8.89□□□□□ -0.99
TTC39C-203ENST00000540918 CLCA1A8K7I4 914 aa8.89□□□□□ -0.99
TTC39C-203ENST00000540918 A8MV72 311 aaPredicted RBP8.89□□□□□ -0.99
TTC39C-203ENST00000540918 LDOC1O95751 146 aaPredicted RBP8.89□□□□□ -0.99
TTC39C-203ENST00000540918 SLC5A2P31639 672 aa8.89□□□□□ -0.99
TTC39C-203ENST00000540918 GBX1Q14549 363 aa8.89□□□□□ -0.99
TTC39C-203ENST00000540918 USP43Q70EL4 1123 aa8.89□□□□□ -0.99
TTC39C-203ENST00000540918 B3GNT8Q7Z7M8 397 aa8.89□□□□□ -0.99
TTC39C-203ENST00000540918 LAS2Q8IYD9 372 aa8.89□□□□□ -0.99
TTC39C-203ENST00000540918 NDNFQ8TB73 568 aa8.89□□□□□ -0.99
TTC39C-203ENST00000540918 NEURL3Q96EH8 262 aa8.89□□□□□ -0.99
TTC39C-203ENST00000540918 KCNN2Q9H2S1 579 aa8.89□□□□□ -0.99
TTC39C-203ENST00000540918 EPHA6Q9UF33 1036 aa8.89□□□□□ -0.99
TTC39C-203ENST00000540918 MDC1Q14676 2089 aaKnown RBP8.88□□□□□ -0.99
TTC39C-203ENST00000540918 TRBV2A0A0J9YWF9 115 aa8.88□□□□□ -0.99
TTC39C-203ENST00000540918 A6NCN8 305 aa8.88□□□□□ -0.99
TTC39C-203ENST00000540918 MAGEB4O15481 346 aaPredicted RBP8.88□□□□□ -0.99
TTC39C-203ENST00000540918 MAS1P04201 325 aa8.88□□□□□ -0.99
TTC39C-203ENST00000540918 PSKH1P11801 424 aa8.88□□□□□ -0.99
TTC39C-203ENST00000540918 SDC2P34741 201 aa8.88□□□□□ -0.99
TTC39C-203ENST00000540918 TRIM23P36406 574 aa8.88□□□□□ -0.99
TTC39C-203ENST00000540918 RAB38P57729 211 aa8.88□□□□□ -0.99
TTC39C-203ENST00000540918 HLA-BQ31612 363 aa8.88□□□□□ -0.99
TTC39C-203ENST00000540918 ZNF404Q494X3 552 aa8.88□□□□□ -0.99
TTC39C-203ENST00000540918 SOWAHCQ53LP3 525 aaPredicted RBP8.88□□□□□ -0.99
TTC39C-203ENST00000540918 LCN1P1Q5VSP4 162 aa8.88□□□□□ -0.99
TTC39C-203ENST00000540918 GUSBP11Q6P575 273 aa8.88□□□□□ -0.99
TTC39C-203ENST00000540918 TLDC1Q6P9B6 456 aa8.88□□□□□ -0.99
TTC39C-203ENST00000540918 MSRB3Q8IXL7 192 aa8.88□□□□□ -0.99
TTC39C-203ENST00000540918 BAHD1Q8TBE0 780 aaPredicted RBP8.88□□□□□ -0.99
TTC39C-203ENST00000540918 TMEM234Q8WY98 164 aa8.88□□□□□ -0.99
TTC39C-203ENST00000540918 DUSP23Q9BVJ7 150 aa8.88□□□□□ -0.99
TTC39C-203ENST00000540918 RBM24Q9BX46 236 aaKnown RBP8.88□□□□□ -0.99
TTC39C-203ENST00000540918 OLAHQ9NV23 265 aa8.88□□□□□ -0.99
TTC39C-203ENST00000540918 VNN3Q9NY84 501 aa8.88□□□□□ -0.99
TTC39C-203ENST00000540918 OTOFQ9HC10 1997 aa8.88□□□□□ -0.99
TTC39C-203ENST00000540918 RGPD4Q7Z3J3 1758 aa8.88□□□□□ -0.99
TTC39C-203ENST00000540918 UPK1AO00322 258 aa8.88□□□□□ -0.99
TTC39C-203ENST00000540918 CHRM4P08173 479 aa8.88□□□□□ -0.99
TTC39C-203ENST00000540918 RBMS1P29558 406 aaKnown RBP8.88□□□□□ -0.99
TTC39C-203ENST00000540918 SNU13P55769 128 aaKnown RBP8.88□□□□□ -0.99
TTC39C-203ENST00000540918 PPP3R1P63098 170 aa8.88□□□□□ -0.99
TTC39C-203ENST00000540918 TLE3Q04726 772 aa8.88□□□□□ -0.99
TTC39C-203ENST00000540918 NKAIN1Q4KMZ8 207 aa8.88□□□□□ -0.99
TTC39C-203ENST00000540918 ALG10Q5BKT4 473 aa8.88□□□□□ -0.99
TTC39C-203ENST00000540918 PTOV1Q86YD1 416 aa8.88□□□□□ -0.99
TTC39C-203ENST00000540918 ADGRF3Q8IZF5 1079 aa8.88□□□□□ -0.99
TTC39C-203ENST00000540918 SAMD12Q8N8I0 201 aa8.88□□□□□ -0.99
TTC39C-203ENST00000540918 OR5L2Q8NGL0 311 aa8.88□□□□□ -0.99
TTC39C-203ENST00000540918 S100ZQ8WXG8 99 aa8.88□□□□□ -0.99
TTC39C-203ENST00000540918 FCGR1BQ92637 280 aa8.88□□□□□ -0.99
TTC39C-203ENST00000540918 NAT6Q93015 286 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms